| Genome information | |
|---|---|
| Genome ID | UHGV-2161842 |
| vOTU ID | vOTU-008261 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029771|Ga0243801_101719|provirus_1_12142 |
| BioSample | SAMN05971508 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 21.20% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 4 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9468 |
| Virus hallmark genes (geNomad) | 0 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 8.99 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 12,142 bps |
| GC content | 41.44% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 28 |
| CDS density | 89.89% |
| Average CDS length | 400.61 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |