| Genome information | |
|---|---|
| Genome ID | UHGV-2168008 |
| vOTU ID | vOTU-015204 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029795|Ga0243742_1000267|provirus_42_35126 |
| BioSample | SAMN05971445 |
| Country | United States |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 38.31% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 12 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9715 |
| Virus hallmark genes (geNomad) | 6 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 32.12 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 35,085 bps |
| GC content | 39.20% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 59 |
| CDS density | 87.97% |
| Average CDS length | 525.51 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |