| Genome information | |
|---|---|
| Genome ID | UHGV-2170080 |
| vOTU ID | vOTU-000113 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029790|Ga0242825_1000561|provirus_1_49181 |
| BioSample | SAMN05545073 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 73.27% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 4 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9736 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 6.18 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 33,658 bps |
| GC content | 44.50% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 44 |
| CDS density | 90.76% |
| Average CDS length | 697.57 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |