| Genome information | |
|---|---|
| Genome ID | UHGV-2179806 |
| vOTU ID | vOTU-016849 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029855|Ga0245295_1000788|provirus_2_13480 |
| BioSample | SAMEA3449346 |
| Country | United Kingdom |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 72.63% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 2 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.8275 |
| Virus hallmark genes (geNomad) | 1 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 0.89 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 13,479 bps |
| GC content | 36.10% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 18 |
| CDS density | 83.54% |
| Average CDS length | 626.83 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |