UHGV-2182151

Genome information

vOTU vOTU-019658

Genome length 35,332 bps

CDS count 51

Completeness 89.25% (medium-quality)

geNomad score 0.9633

Prediction confidence Confident

Genome information
Genome ID	UHGV-2182151
vOTU ID	vOTU-019658
vOTU representative	Yes
Source dataset	IMG/VR v4
Original genome ID	3300029861\|Ga0245310_100245\|provirus_43_39029
BioSample	SAMEA3449360
Country	United Kingdom
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.25% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9633
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.86
Jumbo phage	No

Genome content
Genome length	35,332 bps
GC content	41.49%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	51
CDS density	92.09%
Average CDS length	642.65 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2182151_1	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2182151_1	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-2182151_1	UniRef90	UniRef90_A0A416BNF2	XRE family transcriptional regulator	NA
UHGV-2182151_1	eggNOG-mapper	1121115.AXVN01000006_gene2173	sequence-specific DNA binding	NA
UHGV-2182151_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2182151_1	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2182151_1	Structural annotation	PF12844, MF_00535, NF007257, COG3655	NA	NA
UHGV-2182151_2	UniRef90	UniRef90_A0A416BNK0	NA	NA
UHGV-2182151_2	eggNOG-mapper	257314.LJ_1456	NA	NA
UHGV-2182151_2	Pfam	PF05339	NA	DUF739
UHGV-2182151_2	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-2182151_3	PHROG	phrog_585	NA	unknown function
UHGV-2182151_3	UniRef90	UniRef90_A0A415FLQ9	NA	NA
UHGV-2182151_3	eggNOG-mapper	97138.C820_00628	NA	NA
UHGV-2182151_3	Pfam	PF10711	NA	DUF2513
UHGV-2182151_3	Structural annotation	PF10711, MF_01819, TIGR03433, COG3432	NA	NA
UHGV-2182151_5	PHROG	phrog_9607	NA	unknown function
UHGV-2182151_5	eggNOG-mapper	1378168.N510_03161	NA	NA
UHGV-2182151_5	Structural annotation	PF02883, MF_00791, NF012200, COG3354	NA	NA
UHGV-2182151_6	Structural annotation	PF09202, MF_01819, NF008565, COG3432	NA	NA
UHGV-2182151_7	eggNOG-mapper	1121115.AXVN01000006_gene2172	NA	NA
UHGV-2182151_11	PHROG	phrog_659	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2182151_11	UniRef90	UniRef90_UPI000E49F6EC	NA	NA
UHGV-2182151_11	eggNOG-mapper	33035.JPJF01000135_gene5082	NA	NA
UHGV-2182151_11	Pfam	PF06378	NA	DUF1071
UHGV-2182151_11	Structural annotation	PF06378, TIGR00607, COG5055	NA	NA
UHGV-2182151_12	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2182151_12	eggNOG-mapper	411490.ANACAC_00804	NA	NA
UHGV-2182151_13	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2182151_13	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-2182151_13	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-2182151_14	PHROG	phrog_10469	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2182151_14	UniRef90	UniRef90_A0A174WT25	Replication initiator A domain-containing protein	NA
UHGV-2182151_14	eggNOG-mapper	97138.C820_00775	DnaD domain protein	NA
UHGV-2182151_14	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2182151_14	Structural annotation	PF10771, MF_01177, TIGR01714, COG0640	NA	NA
UHGV-2182151_15	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-2182151_15	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2182151_15	UniRef90	UniRef90_UPI000E4B7CD2	ATP-binding protein	NA
UHGV-2182151_15	eggNOG-mapper	397291.C804_01604	Bacterial dnaA protein	NA
UHGV-2182151_15	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-2182151_15	COG	COG1484	DNA replication protein DnaC	NA
UHGV-2182151_15	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-2182151_16	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-2182151_16	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-2182151_16	UniRef90	UniRef90_A0A3R6M557	PAPS_reduct domain-containing protein	NA
UHGV-2182151_16	eggNOG-mapper	1235800.C819_02256	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-2182151_16	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-2182151_16	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-2182151_16	Structural annotation	PF01507, MF_00063, TIGR00434, COG0175	NA	NA
UHGV-2182151_17	eggNOG-mapper	411459.RUMOBE_01111	NA	NA
UHGV-2182151_18	eggNOG-mapper	1235799.C818_02666	NA	NA
UHGV-2182151_19	PHROG	phrog_7566	NA	unknown function
UHGV-2182151_19	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-2182151_20	PHROG	phrog_6568	NA	unknown function
UHGV-2182151_21	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2182151_21	UniRef90	UniRef90_A0A413B185	NA	NA
UHGV-2182151_21	eggNOG-mapper	1235792.C808_03069	sigma factor activity	NA
UHGV-2182151_21	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-2182151_21	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2182151_21	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-2182151_22	KOfam	K06926	NA	NA
UHGV-2182151_22	PHROG	phrog_5836	NA	unknown function
UHGV-2182151_22	UniRef90	UniRef90_A0A1C5X482	Predicted ATP-binding protein involved in virulence	NA
UHGV-2182151_22	eggNOG-mapper	500633.CLOHIR_00519	NA	NA
UHGV-2182151_22	PADLOC	AbiLi-1	AbiLi	Abi
UHGV-2182151_22	Pfam	PF13304	AAA domain, putative AbiEii toxin, Type IV TA system	AAA_21
UHGV-2182151_22	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-2182151_22	Structural annotation	PF13304, MF_00365, NF041760, COG1195	NA	NA
UHGV-2182151_23	PHROG	phrog_10204	NA	unknown function
UHGV-2182151_23	eggNOG-mapper	1200567.JNKD01000025_gene587	NA	NA
UHGV-2182151_23	AcrCatalog	cluster_12761	NA	NA
UHGV-2182151_24	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-2182151_24	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-2182151_24	UniRef90	UniRef90_UPI000E43AB8F	terminase small subunit	NA
UHGV-2182151_24	eggNOG-mapper	742740.HMPREF9474_03499	Terminase Small Subunit	NA
UHGV-2182151_24	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-2182151_24	COG	COG3728	Phage terminase, small subunit	NA
UHGV-2182151_24	Structural annotation	PF03592, COG3728	NA	NA
UHGV-2182151_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2182151_25	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-2182151_25	UniRef90	UniRef90_A0A414SEW8	Terminase	NA
UHGV-2182151_25	eggNOG-mapper	742740.HMPREF9474_03500	Phage terminase, large subunit, PBSX family	NA
UHGV-2182151_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-2182151_25	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2182151_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-2182151_26	UniRef90	UniRef90_A0A6L8XU40	Capsid protein	NA
UHGV-2182151_26	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-2182151_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-2182151_27	PHROG	phrog_25639	NA	unknown function
UHGV-2182151_27	eggNOG-mapper	742740.HMPREF9474_03502	NA	NA
UHGV-2182151_28	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2182151_28	UniRef90	UniRef90_A0A416Q253	Minor capsid protein	NA
UHGV-2182151_28	eggNOG-mapper	33035.JPJF01000093_gene2255	NA	NA
UHGV-2182151_28	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2182151_28	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-2182151_28	COG	COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	NA
UHGV-2182151_28	Structural annotation	PF06152	NA	NA
UHGV-2182151_30	PHROG	phrog_3675	NA	unknown function
UHGV-2182151_30	UniRef90	UniRef90_A0A416Q246	Dihydrolipoyl dehydrogenase	NA
UHGV-2182151_30	eggNOG-mapper	585501.HMPREF6123_0838	YjcQ protein	NA
UHGV-2182151_30	Pfam	PF09639	YjcQ protein	YjcQ
UHGV-2182151_30	Structural annotation	PF09639, TIGR04176	NA	NA
UHGV-2182151_31	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-2182151_31	UniRef90	UniRef90_UPI000E473058	NA	NA
UHGV-2182151_31	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-2182151_31	Structural annotation	PF14359	NA	NA
UHGV-2182151_32	PHROG	phrog_918	NA	unknown function
UHGV-2182151_32	UniRef90	UniRef90_UPI00156D5D02	NA	NA
UHGV-2182151_32	eggNOG-mapper	537007.BLAHAN_05515	NA	NA
UHGV-2182151_32	Pfam	PF19791	NA	DUF6275
UHGV-2182151_32	Structural annotation	PF19791	NA	NA
UHGV-2182151_33	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-2182151_33	UniRef90	UniRef90_R6R5K5	Protein 64 protein	NA
UHGV-2182151_33	eggNOG-mapper	521003.COLINT_02327	NA	NA
UHGV-2182151_35	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-2182151_35	eggNOG-mapper	1304866.K413DRAFT_0806	NA	NA
UHGV-2182151_36	PHROG	phrog_422	major head protein	head and packaging
UHGV-2182151_36	UniRef90	UniRef90_A0A414W378	Phage capsid protein	NA
UHGV-2182151_36	eggNOG-mapper	663278.Ethha_1589	NA	NA
UHGV-2182151_36	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2182151_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-2182151_37	eggNOG-mapper	1304866.K413DRAFT_0783	NA	NA
UHGV-2182151_38	PHROG	phrog_8710	NA	unknown function
UHGV-2182151_38	eggNOG-mapper	1304866.K413DRAFT_0782	NA	NA
UHGV-2182151_38	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-2182151_39	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-2182151_40	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-2182151_40	UniRef90	UniRef90_UPI001C0EB705	minor capsid protein	NA
UHGV-2182151_40	eggNOG-mapper	483218.BACPEC_01150	NA	NA
UHGV-2182151_40	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-2182151_40	Structural annotation	PF12691, COG5003	NA	NA
UHGV-2182151_41	PHROG	phrog_820	major tail protein	tail
UHGV-2182151_41	eggNOG-mapper	33035.JPJF01000093_gene2246	NA	NA
UHGV-2182151_41	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-2182151_42	PHROG	phrog_8300	NA	unknown function
UHGV-2182151_42	eggNOG-mapper	742740.HMPREF9474_03512	NA	NA
UHGV-2182151_42	Structural annotation	PF06854	NA	NA
UHGV-2182151_43	PHROG	phrog_8355	NA	unknown function
UHGV-2182151_43	UniRef90	UniRef90_UPI001C10E2B7	Gp15 family bacteriophage protein	NA
UHGV-2182151_43	eggNOG-mapper	483218.BACPEC_01147	Bacteriophage Gp15 protein	NA
UHGV-2182151_43	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2182151_44	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2182151_44	UniRef90	UniRef90_A0A1C5RGR7	Phage-related protein	NA
UHGV-2182151_44	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-2182151_44	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2182151_44	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2182151_45	PHROG	phrog_1194	NA	unknown function
UHGV-2182151_45	eggNOG-mapper	33035.JPJF01000093_gene2242	NA	NA
UHGV-2182151_45	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-2182151_46	PHROG	phrog_6616	tail protein	tail
UHGV-2182151_46	UniRef90	UniRef90_A0A415L5E9	Peptidase S74 domain-containing protein	NA
UHGV-2182151_46	eggNOG-mapper	476272.RUMHYD_01992	NA	NA
UHGV-2182151_46	Structural annotation	PF05113, PF18432, NF033848, NF011735, COG4379	NA	NA
UHGV-2182151_47	PHROG	phrog_18444	NA	unknown function
UHGV-2182151_47	eggNOG-mapper	411459.RUMOBE_00912	NA	NA
UHGV-2182151_48	PHROG	phrog_7389	tail fiber protein	tail
UHGV-2182151_48	eggNOG-mapper	445971.ANASTE_00730	nuclear chromosome segregation	NA
UHGV-2182151_48	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-2182151_49	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-2182151_49	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-2182151_49	COG	COG5492	NA	NA
UHGV-2182151_50	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-2182151_50	PHROG	phrog_7158	NA	unknown function
UHGV-2182151_50	UniRef90	UniRef90_UPI000F0AFADB	metallophosphoesterase	NA
UHGV-2182151_50	eggNOG-mapper	1334046.AYTB01000013_gene454	Phage minor structural protein	NA
UHGV-2182151_50	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-2182151_50	COG	COG4926	Phage-related protein	NA
UHGV-2182151_50	Structural annotation	PF12850, PF10014, MF_00905, NF008359, COG5555	NA	NA
UHGV-2182151_51	PHROG	phrog_199	holin	lysis
UHGV-2182151_51	UniRef90	UniRef90_A0A416QWZ9	Holin	NA
UHGV-2182151_51	eggNOG-mapper	411462.DORLON_00766	Bacteriophage holin family	NA
UHGV-2182151_51	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2182151_51	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2182151_51	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-2182151_51	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA