vOTU-000319

Overview

No. of genomes 71

Genome length 43,941 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000319
Number of genomes	71
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00160 › vGENUS-00101 › vSUBGEN-12587 › vOTU-000319
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2101700
BioSample	SAMEA3708763
Genome length	43,941 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	62
CDS density	94.13%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2101700_1	eggNOG-mapper	1203606.HMPREF1526_02741	NA	NA
UHGV-2101700_2	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-2101700_2	eggNOG-mapper	1226322.HMPREF1545_00785	NA	NA
UHGV-2101700_2	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-2101700_4	Structural annotation	PF18707, NF041740, COG5501	NA	NA
UHGV-2101700_5	eggNOG-mapper	1226322.HMPREF1545_00783	Chaperone of endosialidase	NA
UHGV-2101700_5	Structural annotation	PF07902, NF041249	NA	NA
UHGV-2101700_6	PHROG	phrog_12105	NA	unknown function
UHGV-2101700_6	eggNOG-mapper	1519439.JPJG01000060_gene1891	NA	NA
UHGV-2101700_7	PHROG	phrog_27545	NA	unknown function
UHGV-2101700_7	UniRef90	UniRef90_D1PRE7	Glycosyl hydrolase, family 18 family protein	NA
UHGV-2101700_7	eggNOG-mapper	1519439.JPJG01000060_gene1895	NA	NA
UHGV-2101700_7	Structural annotation	PF16170	NA	NA
UHGV-2101700_8	PHROG	phrog_10993	Hoc-like head decoration	head and packaging
UHGV-2101700_8	UniRef90	UniRef90_A0A3D4D8F0	NA	NA
UHGV-2101700_8	eggNOG-mapper	1121334.KB911071_gene1970	NA	NA
UHGV-2101700_8	Pfam	PF19789	NA	DUF6273
UHGV-2101700_8	Structural annotation	PF19789	NA	NA
UHGV-2101700_9	KOfam	K19719	COL2A; collagen type II alpha	NA
UHGV-2101700_9	PHROG	phrog_819	tail protein	tail
UHGV-2101700_9	UniRef90	UniRef90_UPI00068BE71D	collagen-like protein	NA
UHGV-2101700_9	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-2101700_9	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2101700_9	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-2101700_9	Structural annotation	PF10651, NF033814	NA	NA
UHGV-2101700_10	PHROG	phrog_15239	NA	unknown function
UHGV-2101700_10	eggNOG-mapper	1449126.JQKL01000003_gene1694	NA	NA
UHGV-2101700_11	PHROG	phrog_1357	major head protein	head and packaging
UHGV-2101700_11	UniRef90	UniRef90_A0A8D9UH64	Major capsid protein	NA
UHGV-2101700_11	eggNOG-mapper	1449126.JQKL01000003_gene1695	NA	NA
UHGV-2101700_11	Pfam	PF13252	NA	DUF4043
UHGV-2101700_11	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-2101700_11	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2101700_12	PHROG	phrog_13908	NA	unknown function
UHGV-2101700_12	eggNOG-mapper	1410650.JHWL01000003_gene2831	NA	NA
UHGV-2101700_13	Structural annotation	NF011128, COG2868	NA	NA
UHGV-2101700_14	PHROG	phrog_156	portal protein	head and packaging
UHGV-2101700_14	UniRef90	UniRef90_A0A8D9UH10	Portal protein	NA
UHGV-2101700_14	eggNOG-mapper	748224.HMPREF9436_01396	NA	NA
UHGV-2101700_14	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-2101700_15	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2101700_15	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-2101700_15	UniRef90	UniRef90_A0A1Y4WJ48	Terminase-like family protein	NA
UHGV-2101700_15	eggNOG-mapper	748224.HMPREF9436_01395	Terminase-like family	NA
UHGV-2101700_15	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2101700_15	COG	COG1783	Phage terminase large subunit	NA
UHGV-2101700_15	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2101700_16	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-2101700_16	UniRef90	UniRef90_UPI00195648BB	DNA-packaging protein	NA
UHGV-2101700_16	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-2101700_16	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-2101700_16	Structural annotation	PF16677	NA	NA
UHGV-2101700_18	eggNOG-mapper	445972.ANACOL_00168	NA	NA
UHGV-2101700_20	UniRef90	UniRef90_A0A8D9PDK2	Zinc-ribbon containing domain	NA
UHGV-2101700_23	UniRef90	UniRef90_UPI0012AD39DD	leucine-rich repeat protein	NA
UHGV-2101700_24	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-2101700_24	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-2101700_25	PHROG	phrog_27610	NA	unknown function
UHGV-2101700_26	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2101700_26	UniRef90	UniRef90_UPI0006A41431	DNA cytosine methyltransferase	NA
UHGV-2101700_26	eggNOG-mapper	1235790.C805_00032	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2101700_26	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2101700_26	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-2101700_27	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2101700_27	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2101700_28	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-2101700_28	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2101700_28	UniRef90	UniRef90_UPI00115BCC30	helix-turn-helix domain-containing protein	NA
UHGV-2101700_28	eggNOG-mapper	460265.Mnod_5702	Helix-turn-helix XRE-family like proteins	NA
UHGV-2101700_28	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2101700_28	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-2101700_28	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2101700_28	Structural annotation	PF01381, PF13744, NF041951, COG3655, COG2944	NA	NA
UHGV-2101700_30	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2101700_30	UniRef90	UniRef90_UPI001C0170D2	NA	NA
UHGV-2101700_30	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-2101700_30	Pfam	PF06356	NA	DUF1064
UHGV-2101700_30	Structural annotation	PF06356	NA	NA
UHGV-2101700_33	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-2101700_33	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2101700_33	UniRef90	UniRef90_UPI00137A9A0F	ATP-binding protein	NA
UHGV-2101700_33	eggNOG-mapper	203119.Cthe_2467	IstB-like ATP binding protein	NA
UHGV-2101700_33	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-2101700_33	NCBIFam	NF005992.0	hypothetical protein	NA
UHGV-2101700_33	COG	COG1484	DNA replication protein DnaC	NA
UHGV-2101700_33	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-2101700_34	PHROG	phrog_16304	NA	unknown function
UHGV-2101700_34	UniRef90	UniRef90_A0A810PZI8	NA	NA
UHGV-2101700_34	eggNOG-mapper	1265490.JHVY01000003_gene3091	NA	NA
UHGV-2101700_34	Pfam	PF19808	NA	DUF6291
UHGV-2101700_34	Structural annotation	PF19808	NA	NA
UHGV-2101700_35	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2101700_35	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2101700_35	UniRef90	UniRef90_R5SNS5	Single-stranded DNA-binding protein	NA
UHGV-2101700_35	eggNOG-mapper	1519439.JPJG01000082_gene432	Single-strand binding protein family	NA
UHGV-2101700_35	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2101700_35	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2101700_35	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2101700_35	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2101700_35	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2101700_36	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-2101700_36	UniRef90	UniRef90_G9YN42	Metallo-beta-lactamase domain protein	NA
UHGV-2101700_36	eggNOG-mapper	665956.HMPREF1032_03101	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-2101700_36	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-2101700_36	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-2101700_36	Structural annotation	PF12706, MF_01818, TIGR03307, COG1234	NA	NA
UHGV-2101700_37	PHROG	phrog_3657	NA	unknown function
UHGV-2101700_37	UniRef90	UniRef90_UPI001DC4E782	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-2101700_37	eggNOG-mapper	411461.DORFOR_00020	NA	NA
UHGV-2101700_38	PHROG	phrog_674	NA	unknown function
UHGV-2101700_38	UniRef90	UniRef90_A0A374N9T8	NA	NA
UHGV-2101700_38	eggNOG-mapper	665956.HMPREF1032_03103	NA	NA
UHGV-2101700_38	Pfam	PF07083	NA	DUF1351
UHGV-2101700_38	Structural annotation	PF07083	NA	NA
UHGV-2101700_42	eggNOG-mapper	693746.OBV_43260	NA	NA
UHGV-2101700_42	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-2101700_44	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2101700_44	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-2101700_44	UniRef90	UniRef90_UPI000466CBED	phage antirepressor KilAC domain-containing protein	NA
UHGV-2101700_44	eggNOG-mapper	1232443.BAIA02000079_gene53	AntA/AntB antirepressor	NA
UHGV-2101700_44	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-2101700_44	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2101700_44	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-2101700_44	Structural annotation	PF03374, PF08346, TIGR02681, COG3645, COG3561	NA	NA
UHGV-2101700_45	UniRef90	UniRef90_N9Z4Q7	HTH cro/C1-type domain-containing protein	NA
UHGV-2101700_45	eggNOG-mapper	742733.HMPREF9469_01812	helix-turn-helix	NA
UHGV-2101700_45	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2101700_45	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2101700_46	eggNOG-mapper	1437600.JDUI01000007_gene828	Helix-turn-helix XRE-family like proteins	NA
UHGV-2101700_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2101700_46	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2101700_46	Structural annotation	PF01381, MF_00535, NF041951, TIGR02607, COG3655, COG3093	NA	NA
UHGV-2101700_48	UniRef90	UniRef90_UPI001BB4762F	DnaJ domain-containing protein	NA
UHGV-2101700_48	eggNOG-mapper	715451.ambt_14505	NA	NA
UHGV-2101700_49	UniRef90	UniRef90_R5HRH2	DNA-binding helix-turn-helix protein	NA
UHGV-2101700_49	eggNOG-mapper	537007.BLAHAN_06565	sequence-specific DNA binding	NA
UHGV-2101700_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2101700_49	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2101700_49	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-2101700_50	KOfam	K14059	int; integrase	NA
UHGV-2101700_50	PHROG	phrog_1	integrase	integration and excision
UHGV-2101700_50	UniRef90	UniRef90_G4L0W3	Tyr recombinase domain-containing protein	NA
UHGV-2101700_50	eggNOG-mapper	693746.OBV_43340	Belongs to the 'phage' integrase family	NA
UHGV-2101700_50	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2101700_50	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2101700_50	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-2101700_52	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2101700_53	PHROG	phrog_16490	NA	unknown function
UHGV-2101700_53	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-2101700_54	PHROG	phrog_22984	NA	unknown function
UHGV-2101700_56	UniRef90	UniRef90_A0A8D9PDQ3	ECF sigma factor	NA
UHGV-2101700_56	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-2101700_56	Structural annotation	PF04545, MF_00674, NF009179, COG1342	NA	NA
UHGV-2101700_57	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2101700_57	PHROG	phrog_670	endolysin	lysis
UHGV-2101700_57	UniRef90	UniRef90_A0A3D4D877	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2101700_57	eggNOG-mapper	1519439.JPJG01000060_gene1899	Ami_2	NA
UHGV-2101700_57	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2101700_57	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-2101700_57	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-2101700_58	PHROG	phrog_13256	NA	unknown function
UHGV-2101700_58	eggNOG-mapper	1519439.JPJG01000060_gene1898	NA	NA
UHGV-2101700_60	PHROG	phrog_937	hemolysin	other
UHGV-2101700_60	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-2101700_61	PHROG	phrog_22978	NA	unknown function
UHGV-2101700_61	UniRef90	UniRef90_A0A3D4D8G0	PBECR5 domain-containing protein	NA
UHGV-2101700_61	eggNOG-mapper	1519439.JPJG01000060_gene1905	NA	NA
UHGV-2101700_61	Pfam	PF18814	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2101700	Yes	43,941 bps	56.95%	100.00%	0.9814
UHGV-0159433	No	43,938 bps	56.99%	100.00%	0.9815
UHGV-1384031	No	43,938 bps	56.99%	100.00%	0.9815
UHGV-0188303	No	43,897 bps	56.93%	100.00%	0.9806
UHGV-0321190	No	43,897 bps	56.93%	100.00%	0.9820
UHGV-1383431	No	43,897 bps	56.93%	100.00%	0.9819
UHGV-0281092	No	43,864 bps	57.02%	100.00%	0.9817
UHGV-0246611	No	43,739 bps	56.99%	100.00%	0.9811
UHGV-0237190	No	43,678 bps	57.04%	100.00%	0.9812
UHGV-0070383	No	43,672 bps	57.04%	100.00%	0.9821
UHGV-1379871	No	43,672 bps	57.04%	100.00%	0.9812
UHGV-1384659	No	43,547 bps	57.24%	100.00%	0.9821
UHGV-0290344	No	43,480 bps	56.99%	100.00%	0.9815
UHGV-0307370	No	43,448 bps	56.94%	100.00%	0.9807
UHGV-0237443	No	43,426 bps	56.88%	100.00%	0.9798
UHGV-1379398	No	43,408 bps	57.28%	100.00%	0.9815
UHGV-0243012	No	43,406 bps	56.79%	100.00%	0.9819
UHGV-0379425	No	42,820 bps	56.83%	100.00%	0.9818
UHGV-0104676	No	51,289 bps	58.06%	99.90%	0.9817
UHGV-1438137	No	51,289 bps	58.06%	99.90%	0.9817
UHGV-2042431	No	47,475 bps	56.39%	99.90%	0.9750
UHGV-0314299	No	44,087 bps	57.03%	99.90%	0.9810
UHGV-1291559	No	44,072 bps	56.90%	99.90%	0.9720
UHGV-0238094	No	43,829 bps	56.98%	99.90%	0.9812
UHGV-2096787	No	43,555 bps	57.05%	99.90%	0.9813
UHGV-0084911	No	40,492 bps	57.31%	99.90%	0.9698
UHGV-1495515	No	42,855 bps	56.92%	99.29%	0.9816
UHGV-1389896	No	42,132 bps	57.05%	97.54%	0.9814
UHGV-0304633	No	41,584 bps	56.70%	96.34%	0.9818
UHGV-1517503	No	40,492 bps	57.31%	93.71%	0.9813
UHGV-0102477	No	35,083 bps	57.40%	81.21%	0.9814
UHGV-1422249	No	35,083 bps	57.40%	81.21%	0.9814
UHGV-0103080	No	34,674 bps	56.43%	80.36%	0.9814
UHGV-0157418	No	34,650 bps	56.77%	80.11%	0.9803
UHGV-1467503	No	34,650 bps	56.77%	80.11%	0.9803
UHGV-1476465	No	31,941 bps	56.71%	73.93%	0.9815
UHGV-0274013	No	31,329 bps	57.61%	72.60%	0.9821
UHGV-0107769	No	30,595 bps	56.74%	70.76%	0.9817
UHGV-1469326	No	30,595 bps	56.74%	70.76%	0.9817
UHGV-0076077	No	30,297 bps	56.49%	70.14%	0.9783
UHGV-0365487	No	29,716 bps	58.18%	68.86%	0.9819
UHGV-1513025	No	29,398 bps	56.42%	68.06%	0.9782
UHGV-0244324	No	28,842 bps	56.88%	66.71%	0.9821
UHGV-2090155	No	27,917 bps	54.96%	64.49%	0.9753
UHGV-0161352	No	23,879 bps	56.41%	55.16%	0.9809
UHGV-1466962	No	23,879 bps	56.41%	55.16%	0.9809
UHGV-1382342	No	23,387 bps	56.25%	54.14%	0.9798
UHGV-0279958	No	23,457 bps	55.88%	54.13%	0.9793
UHGV-0102226	No	23,321 bps	56.17%	53.91%	0.9805
UHGV-1377768	No	23,321 bps	56.17%	53.91%	0.9805
UHGV-0305990	No	22,707 bps	56.56%	52.62%	0.9800
UHGV-1384751	No	21,632 bps	57.29%	50.01%	0.9793
UHGV-0120532	No	20,149 bps	58.70%	46.67%	0.9803
UHGV-1720180	No	20,149 bps	58.70%	46.67%	0.9803
UHGV-1706900	No	17,352 bps	57.71%	40.22%	0.9821
UHGV-1736527	No	15,015 bps	57.70%	34.88%	0.9816
UHGV-0107687	No	14,681 bps	54.45%	34.01%	0.9810
UHGV-1688727	No	14,443 bps	57.11%	33.44%	0.9829
UHGV-0218067	No	14,124 bps	57.10%	32.60%	0.9817
UHGV-1763532	No	13,795 bps	59.86%	31.93%	0.9817
UHGV-0348781	No	13,035 bps	54.03%	30.17%	0.9795
UHGV-1674013	No	12,719 bps	58.32%	29.46%	0.9814
UHGV-1682421	No	12,659 bps	54.58%	29.20%	0.9785
UHGV-1567172	No	11,906 bps	59.00%	27.57%	0.9823
UHGV-1566437	No	11,878 bps	57.94%	27.51%	0.9823
UHGV-1838904	No	11,875 bps	54.48%	27.44%	0.9787
UHGV-1555932	No	11,259 bps	58.13%	26.08%	0.9789
UHGV-1553299	No	11,256 bps	58.13%	26.07%	0.9790
UHGV-1793400	No	10,986 bps	58.50%	25.51%	0.9812
UHGV-1753817	No	10,782 bps	58.79%	24.96%	0.9808
UHGV-1718819	No	10,455 bps	56.74%	24.22%	0.9827