vOTU-000442

Overview

No. of genomes 37

Genome length 39,402 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000442
Number of genomes	37
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vGENUS-00584 › vSUBGEN-03851 › vOTU-000442
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1545260
BioSample	SAMEA2467022
Genome length	39,402 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	71
CDS density	88.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1545260_1	eggNOG-mapper	439292.Bsel_2991	Ami_2	NA
UHGV-1545260_1	Pfam	PF05036	SPOR domain	SPOR
UHGV-1545260_1	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1545260_3	PHROG	phrog_3754	NA	unknown function
UHGV-1545260_3	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-1545260_4	PHROG	phrog_21718	NA	unknown function
UHGV-1545260_4	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1545260_5	PHROG	phrog_22984	NA	unknown function
UHGV-1545260_6	PHROG	phrog_16490	NA	unknown function
UHGV-1545260_6	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1545260_7	PHROG	phrog_20016	NA	unknown function
UHGV-1545260_7	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1545260_7	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1545260_7	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1545260_8	Structural annotation	PF12510	NA	NA
UHGV-1545260_9	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-1545260_10	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1545260_10	PHROG	phrog_95	integrase	integration and excision
UHGV-1545260_10	UniRef90	UniRef90_A0A3A9I9T1	Recombinase family protein	NA
UHGV-1545260_10	eggNOG-mapper	357809.Cphy_2997	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-1545260_10	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1545260_10	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1545260_10	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1545260_10	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-1545260_11	UniRef90	UniRef90_R5HRH2	DNA-binding helix-turn-helix protein	NA
UHGV-1545260_11	eggNOG-mapper	537007.BLAHAN_06565	sequence-specific DNA binding	NA
UHGV-1545260_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1545260_11	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1545260_11	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-1545260_14	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1545260_14	UniRef90	UniRef90_Q2RLS1	Transcriptional regulator, XRE family	NA
UHGV-1545260_14	eggNOG-mapper	264732.Moth_0284	Helix-turn-helix XRE-family like proteins	NA
UHGV-1545260_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1545260_14	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1545260_14	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-1545260_15	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1545260_15	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1545260_15	UniRef90	UniRef90_A0A096BAN9	HTH cro/C1-type domain-containing protein	NA
UHGV-1545260_15	eggNOG-mapper	1282665.H353_08829	Helix-turn-helix XRE-family like proteins	NA
UHGV-1545260_15	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1545260_15	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1545260_15	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1545260_19	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1545260_19	UniRef90	UniRef90_A0A8D9PDS3	Resistance protein	NA
UHGV-1545260_19	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-1545260_19	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1545260_19	Structural annotation	PF05565	NA	NA
UHGV-1545260_20	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1545260_20	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-1545260_20	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-1545260_20	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-1545260_21	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1545260_21	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-1545260_21	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-1545260_21	Structural annotation	PF05772	NA	NA
UHGV-1545260_22	PHROG	phrog_7566	NA	unknown function
UHGV-1545260_22	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-1545260_22	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-1545260_23	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1545260_23	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1545260_23	UniRef90	UniRef90_A0A350TKS2	Single-stranded DNA-binding protein	NA
UHGV-1545260_23	eggNOG-mapper	1226322.HMPREF1545_04080	Single-strand binding protein family	NA
UHGV-1545260_23	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1545260_23	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1545260_23	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1545260_23	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1545260_23	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1545260_25	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1545260_25	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1545260_25	UniRef90	UniRef90_A0A810Q3X8	IstB_IS21 domain-containing protein	NA
UHGV-1545260_25	eggNOG-mapper	445972.ANACOL_01829	NA	NA
UHGV-1545260_25	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1545260_25	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1545260_25	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-1545260_27	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1545260_27	UniRef90	UniRef90_A0A8D9PDD6	Endonuclease	NA
UHGV-1545260_27	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-1545260_27	Pfam	PF06356	NA	DUF1064
UHGV-1545260_27	Structural annotation	PF06356	NA	NA
UHGV-1545260_29	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1545260_29	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1545260_29	UniRef90	UniRef90_A0A1H7KWC5	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	NA
UHGV-1545260_29	eggNOG-mapper	1280696.ATVY01000096_gene1971	NA	NA
UHGV-1545260_29	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1545260_29	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1545260_29	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-1545260_30	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1545260_30	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1545260_30	UniRef90	UniRef90_A0A8D9PDD1	DNA (Cytosine 5) methyltransferase	NA
UHGV-1545260_30	eggNOG-mapper	622312.ROSEINA2194_01264	C-5 cytosine-specific DNA methylase	NA
UHGV-1545260_30	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1545260_30	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1545260_30	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-1545260_33	PHROG	phrog_38832	NA	unknown function
UHGV-1545260_33	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-1545260_33	Structural annotation	PF11717, TIGR02450	NA	NA
UHGV-1545260_34	PHROG	phrog_3136	NA	unknown function
UHGV-1545260_34	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-1545260_34	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1545260_34	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-1545260_35	Structural annotation	PF04570	NA	NA
UHGV-1545260_39	Structural annotation	PF06289, COG1582	NA	NA
UHGV-1545260_45	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-1545260_45	UniRef90	UniRef90_UPI00195648BB	DNA-packaging protein	NA
UHGV-1545260_45	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-1545260_45	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-1545260_45	Structural annotation	PF16677	NA	NA
UHGV-1545260_46	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1545260_46	PHROG	phrog_10250	NA	unknown function
UHGV-1545260_46	UniRef90	UniRef90_A0A8J6MB41	PBSX family phage terminase large subunit	NA
UHGV-1545260_46	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-1545260_46	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1545260_46	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1545260_46	COG	COG1783	Phage terminase large subunit	NA
UHGV-1545260_46	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1545260_47	PHROG	phrog_64	portal protein	head and packaging
UHGV-1545260_47	UniRef90	UniRef90_UPI0018A8A301	phage portal protein	NA
UHGV-1545260_47	eggNOG-mapper	608534.GCWU000341_02296	phage portal protein, SPP1	NA
UHGV-1545260_47	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1545260_47	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1545260_48	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1545260_48	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-1545260_48	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-1545260_48	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1545260_48	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1545260_48	COG	COG2369	NA	NA
UHGV-1545260_48	Structural annotation	PF04233, PF21814, TIGR01641, COG2369	NA	NA
UHGV-1545260_49	Structural annotation	PF06442, MF_01194, NF000331, COG4014	NA	NA
UHGV-1545260_50	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1545260_50	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-1545260_50	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1545260_50	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1545260_50	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1545260_50	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1545260_51	Structural annotation	PF18152	NA	NA
UHGV-1545260_52	Structural annotation	PF06810	NA	NA
UHGV-1545260_53	PHROG	phrog_544	major head protein	head and packaging
UHGV-1545260_53	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-1545260_53	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-1545260_53	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1545260_55	PHROG	phrog_17977	NA	unknown function
UHGV-1545260_55	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-1545260_55	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1545260_56	PHROG	phrog_17405	head protein	head and packaging
UHGV-1545260_56	Structural annotation	PF11367	NA	NA
UHGV-1545260_57	PHROG	phrog_885	major tail protein	tail
UHGV-1545260_57	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1545260_57	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-1545260_57	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1545260_58	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-1545260_60	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1545260_60	eggNOG-mapper	536233.CLO_1577	tape measure	NA
UHGV-1545260_60	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1545260_60	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-1545260_61	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1545260_61	UniRef90	UniRef90_UPI000E5CE8E9	phage tail family protein	NA
UHGV-1545260_61	eggNOG-mapper	877414.ATWA01000019_gene2049	NA	NA
UHGV-1545260_61	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-1545260_62	PHROG	phrog_3558	tail protein	tail
UHGV-1545260_62	UniRef90	UniRef90_A0A810Q1Y2	Prophage_tail domain-containing protein	NA
UHGV-1545260_62	eggNOG-mapper	1235800.C819_02223	Prophage endopeptidase tail	NA
UHGV-1545260_62	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1545260_62	COG	COG4926	Phage-related protein	NA
UHGV-1545260_62	Structural annotation	PF06605, PF21683, TIGR01665, COG4926	NA	NA
UHGV-1545260_63	PHROG	phrog_372	tail protein	tail
UHGV-1545260_63	UniRef90	UniRef90_UPI001373A0FD	NA	NA
UHGV-1545260_63	eggNOG-mapper	1235802.C823_05263	NA	NA
UHGV-1545260_63	Pfam	PF05895	NA	DUF859
UHGV-1545260_63	COG	COG4675	Phage tail collar domain	NA
UHGV-1545260_63	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-1545260_67	PHROG	phrog_30034	NA	unknown function
UHGV-1545260_67	UniRef90	UniRef90_A0A3D1XGA4	Chitin-binding type-3 domain-containing protein	NA
UHGV-1545260_68	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-1545260_68	PHROG	phrog_31265	NA	unknown function
UHGV-1545260_68	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-1545260_68	Pfam	PF13576	Pentapeptide repeats (9 copies)	Pentapeptide_3
UHGV-1545260_68	Structural annotation	PF13599, NF000421, COG1357	NA	NA
UHGV-1545260_70	PHROG	phrog_199	holin	lysis
UHGV-1545260_70	UniRef90	UniRef90_UPI001BEFC888	Phage holin family protein	NA
UHGV-1545260_70	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-1545260_70	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1545260_70	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1545260_70	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1545260_70	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1545260_71	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1545260_71	PHROG	phrog_435	endolysin	lysis
UHGV-1545260_71	UniRef90	UniRef90_R6GV68	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1545260_71	eggNOG-mapper	411473.RUMCAL_02267	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1545260_71	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1545260_71	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1545260	Yes	39,402 bps	55.26%	100.00%	0.9812
UHGV-0259994	No	42,490 bps	55.18%	100.00%	0.9822
UHGV-0223562	No	40,745 bps	54.97%	100.00%	0.9810
UHGV-0204092	No	40,732 bps	54.94%	100.00%	0.9808
UHGV-1369222	No	40,729 bps	54.96%	100.00%	0.9805
UHGV-1361479	No	40,177 bps	55.00%	100.00%	0.9818
UHGV-1362262	No	40,099 bps	55.07%	100.00%	0.9803
UHGV-1361815	No	39,795 bps	55.43%	100.00%	0.9819
UHGV-0082756	No	39,507 bps	55.29%	100.00%	0.9819
UHGV-1367076	No	39,174 bps	54.91%	100.00%	0.9801
UHGV-1850725	No	38,368 bps	55.51%	100.00%	0.9821
UHGV-0168532	No	41,344 bps	55.00%	99.90%	0.9807
UHGV-1391196	No	40,356 bps	55.15%	99.90%	0.9800
UHGV-1896501	No	39,282 bps	54.91%	98.57%	0.9800
UHGV-0318291	No	33,305 bps	54.68%	83.50%	0.9819
UHGV-1476891	No	31,995 bps	55.52%	80.24%	0.9812
UHGV-1476879	No	31,824 bps	54.97%	79.86%	0.9827
UHGV-1479073	No	31,694 bps	54.50%	79.53%	0.9821
UHGV-0084767	No	31,480 bps	55.51%	78.95%	0.9814
UHGV-1488180	No	27,833 bps	54.83%	69.05%	0.9794
UHGV-1483321	No	26,327 bps	54.12%	66.14%	0.9797
UHGV-1410663	No	25,086 bps	56.21%	62.81%	0.9826
UHGV-1379457	No	23,334 bps	55.70%	58.54%	0.9831
UHGV-1465398	No	20,403 bps	56.01%	51.07%	0.9826
UHGV-1596709	No	18,192 bps	54.09%	45.49%	0.9830
UHGV-0153739	No	16,461 bps	54.67%	40.96%	0.9800
UHGV-0164309	No	15,719 bps	54.56%	39.54%	0.9829
UHGV-1717953	No	13,185 bps	53.94%	33.01%	0.9834
UHGV-0282718	No	12,491 bps	53.97%	31.30%	0.9834
UHGV-1632414	No	12,382 bps	54.59%	31.22%	0.9830
UHGV-1613604	No	12,392 bps	53.28%	30.90%	0.9834
UHGV-1623069	No	12,241 bps	55.90%	30.72%	0.9833
UHGV-1561310	No	11,969 bps	52.32%	29.77%	0.9796
UHGV-1548940	No	11,320 bps	59.19%	28.20%	0.9776
UHGV-1796645	No	11,196 bps	58.09%	28.10%	0.9803
UHGV-0060377	No	11,015 bps	53.70%	27.43%	0.9709
UHGV-1749965	No	10,599 bps	57.90%	26.56%	0.9829