vOTU-000474

Overview

No. of genomes 33

Genome length 44,062 bps

Completeness 100.00% (complete)

Host Faecousia sp003525905

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000474
Number of genomes	33
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00829 › vGENUS-00706 › vSUBGEN-00721 › vOTU-000474
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Faecousia › Faecousia sp003525905
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1377238
BioSample	SAMN06348130
Genome length	44,062 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	92.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1377238_1	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-1377238_2	eggNOG-mapper	1408437.JNJN01000043_gene802	NA	NA
UHGV-1377238_3	PHROG	phrog_16490	NA	unknown function
UHGV-1377238_3	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1377238_5	eggNOG-mapper	445972.ANACOL_01878	NA	NA
UHGV-1377238_6	UniRef90	UniRef90_U2R3E6	KORA domain-containing protein	NA
UHGV-1377238_7	PHROG	phrog_22978	NA	unknown function
UHGV-1377238_7	UniRef90	UniRef90_A0A1Y3SMK5	MuF_C domain-containing protein	NA
UHGV-1377238_7	eggNOG-mapper	693746.OBV_23800	NA	NA
UHGV-1377238_7	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-1377238_8	eggNOG-mapper	1203606.HMPREF1526_02741	NA	NA
UHGV-1377238_9	PHROG	phrog_156	portal protein	head and packaging
UHGV-1377238_9	eggNOG-mapper	1519439.JPJG01000060_gene1886	NA	NA
UHGV-1377238_9	Structural annotation	PF16510, MF_04120, TIGR01542, COG4695	NA	NA
UHGV-1377238_10	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-1377238_10	eggNOG-mapper	1519439.JPJG01000060_gene1903	NA	NA
UHGV-1377238_10	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-1377238_12	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1377238_12	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1377238_12	UniRef90	UniRef90_UPI001105ADB4	PBSX family phage terminase large subunit	NA
UHGV-1377238_12	eggNOG-mapper	1226322.HMPREF1545_03843	phage Terminase large subunit	NA
UHGV-1377238_12	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1377238_12	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1377238_12	COG	COG1783	Phage terminase large subunit	NA
UHGV-1377238_12	Structural annotation	PF04466, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1377238_13	PHROG	phrog_371	major head protein	head and packaging
UHGV-1377238_13	UniRef90	UniRef90_A0A8F2JBL2	Mu-like prophage major head subunit gpT family protein	NA
UHGV-1377238_13	eggNOG-mapper	1226322.HMPREF1545_03848	NA	NA
UHGV-1377238_13	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-1377238_13	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1377238_14	PHROG	phrog_24113	NA	unknown function
UHGV-1377238_14	eggNOG-mapper	1226322.HMPREF1545_03847	NA	NA
UHGV-1377238_14	Structural annotation	PF11133, COG5471	NA	NA
UHGV-1377238_15	PHROG	phrog_35275	NA	unknown function
UHGV-1377238_15	eggNOG-mapper	1226322.HMPREF1545_03846	NA	NA
UHGV-1377238_17	PHROG	phrog_443	holin	lysis
UHGV-1377238_17	UniRef90	UniRef90_UPI0002E2AC7F	holin	NA
UHGV-1377238_17	eggNOG-mapper	1469948.JPNB01000002_gene3855	Putative lactococcus lactis phage r1t holin	NA
UHGV-1377238_17	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1377238_17	Structural annotation	PF16945	NA	NA
UHGV-1377238_18	PHROG	phrog_937	hemolysin	other
UHGV-1377238_18	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-1377238_19	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1377238_19	PHROG	phrog_15001	endolysin	lysis
UHGV-1377238_19	UniRef90	UniRef90_A0A7X7U879	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-1377238_19	eggNOG-mapper	1235835.C814_01292	Ami_2	NA
UHGV-1377238_19	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1377238_19	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1377238_19	COG	COG1388	LysM repeat	NA
UHGV-1377238_19	Structural annotation	PF18342, PF01510, NF041850, COG5632	NA	NA
UHGV-1377238_21	PHROG	phrog_27545	NA	unknown function
UHGV-1377238_21	UniRef90	UniRef90_A0A3D1XGA4	Chitin-binding type-3 domain-containing protein	NA
UHGV-1377238_21	eggNOG-mapper	1122971.BAME01000151_gene6566	NA	NA
UHGV-1377238_21	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-1377238_22	PHROG	phrog_5073	tail fiber protein	tail
UHGV-1377238_22	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1377238_23	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-1377238_23	eggNOG-mapper	1226322.HMPREF1545_03842	DNA-packaging protein gp3	NA
UHGV-1377238_23	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-1377238_23	Structural annotation	PF16677	NA	NA
UHGV-1377238_24	eggNOG-mapper	1226322.HMPREF1545_00288	NA	NA
UHGV-1377238_24	Pfam	PF05225	helix-turn-helix, Psq domain	HTH_psq
UHGV-1377238_25	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1377238_25	eggNOG-mapper	1226322.HMPREF1545_03841	NA	NA
UHGV-1377238_25	Structural annotation	PF01446, NF041486	NA	NA
UHGV-1377238_26	Structural annotation	COG4451	NA	NA
UHGV-1377238_27	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-1377238_27	PHROG	phrog_4433	NA	unknown function
UHGV-1377238_27	eggNOG-mapper	573061.Clocel_3578	regulation of DNA-templated transcription, elongation	NA
UHGV-1377238_27	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1377238_27	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1377238_27	Structural annotation	PF12120, NF000318	NA	NA
UHGV-1377238_28	UniRef90	UniRef90_UPI00164AED9E	helix-turn-helix domain-containing protein	NA
UHGV-1377238_28	eggNOG-mapper	1235798.C817_04600	NA	NA
UHGV-1377238_28	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-1377238_28	Structural annotation	NF040522, COG2944	NA	NA
UHGV-1377238_34	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1377238_34	PHROG	phrog_363	DNA methyltransferase	other
UHGV-1377238_34	UniRef90	UniRef90_G4KRB8	Cytosine-specific methyltransferase	NA
UHGV-1377238_34	eggNOG-mapper	693746.OBV_01900	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-1377238_34	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-1377238_34	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1377238_34	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1377238_34	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1377238_34	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-1377238_35	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1377238_35	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1377238_35	UniRef90	UniRef90_A0A8D9PDC5	Adenine specific DNA methyltransferase	NA
UHGV-1377238_35	eggNOG-mapper	1268240.ATFI01000007_gene431	DNA methylase	NA
UHGV-1377238_35	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-1377238_35	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1377238_35	COG	COG0863	DNA modification methylase	NA
UHGV-1377238_35	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-1377238_36	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-1377238_36	UniRef90	UniRef90_A0A2V2FSM6	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-1377238_36	eggNOG-mapper	40631.O64365_BPN15	NA	NA
UHGV-1377238_36	Pfam	PF14359	NA	DUF4406
UHGV-1377238_36	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-1377238_38	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-1377238_38	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-1377238_40	Structural annotation	PF07039	NA	NA
UHGV-1377238_49	UniRef90	UniRef90_A0A1Y4L0A2	HTH cro/C1-type domain-containing protein	NA
UHGV-1377238_49	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-1377238_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1377238_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1377238_49	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1377238_51	Pfam	PF02805	Metal binding domain of Ada	Ada_Zn_binding
UHGV-1377238_51	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-1377238_53	UniRef90	UniRef90_A0A354UMM3	HTH cro/C1-type domain-containing protein	NA
UHGV-1377238_53	eggNOG-mapper	1449976.KALB_8768	Cupin domain	NA
UHGV-1377238_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1377238_53	COG	COG1917	Cupin domain protein related to quercetin dioxygenase	NA
UHGV-1377238_53	Structural annotation	PF13560, MF_00535, NF041677, COG1396	NA	NA
UHGV-1377238_54	KOfam	K14059	int; integrase	NA
UHGV-1377238_54	PHROG	phrog_1	integrase	integration and excision
UHGV-1377238_54	UniRef90	UniRef90_D4LDY0	Integrase	NA
UHGV-1377238_54	eggNOG-mapper	262724.TT_C0665	Belongs to the 'phage' integrase family	NA
UHGV-1377238_54	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1377238_54	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1377238_54	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1377238_54	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1377238	Yes	44,062 bps	61.71%	100.00%	0.9817
UHGV-2074188	No	43,858 bps	61.44%	100.00%	0.9811
UHGV-0373815	No	43,805 bps	61.42%	100.00%	0.9810
UHGV-1383636	No	43,685 bps	61.44%	100.00%	0.9803
UHGV-1380877	No	43,637 bps	61.61%	100.00%	0.9801
UHGV-0176562	No	43,615 bps	61.61%	100.00%	0.9799
UHGV-0392671	No	43,615 bps	61.61%	100.00%	0.9799
UHGV-0112941	No	43,317 bps	61.20%	100.00%	0.9812
UHGV-2049844	No	43,294 bps	61.38%	100.00%	0.9809
UHGV-1379485	No	43,105 bps	61.35%	100.00%	0.9813
UHGV-0248438	No	42,826 bps	61.96%	100.00%	0.9815
UHGV-1377416	No	42,815 bps	61.56%	100.00%	0.9798
UHGV-0142624	No	44,152 bps	61.44%	99.87%	0.9810
UHGV-1458227	No	44,152 bps	61.44%	99.87%	0.9810
UHGV-0848105	No	43,641 bps	61.72%	98.70%	0.9814
UHGV-1411015	No	43,382 bps	61.40%	98.15%	0.9810
UHGV-0103199	No	42,401 bps	61.76%	95.91%	0.9811
UHGV-1471764	No	42,401 bps	61.76%	95.91%	0.9811
UHGV-0155984	No	40,100 bps	61.38%	90.71%	0.9807
UHGV-1431294	No	40,100 bps	61.38%	90.71%	0.9807
UHGV-1398107	No	38,095 bps	61.33%	86.19%	0.9821
UHGV-1448202	No	38,084 bps	61.33%	86.17%	0.9820
UHGV-1394459	No	38,064 bps	61.50%	86.12%	0.9810
UHGV-1448544	No	36,970 bps	61.20%	83.65%	0.9823
UHGV-1423162	No	23,213 bps	61.59%	52.54%	0.9829
UHGV-1426743	No	22,846 bps	61.52%	51.71%	0.9832
UHGV-0156607	No	17,386 bps	62.43%	39.28%	0.9820
UHGV-1572512	No	16,361 bps	61.19%	37.26%	0.9789
UHGV-1800726	No	15,989 bps	61.50%	36.13%	0.9832
UHGV-2093566	No	14,713 bps	60.56%	33.50%	0.9822
UHGV-1546833	No	11,236 bps	62.86%	25.39%	0.9830
UHGV-1554240	No	10,268 bps	60.83%	23.38%	0.9829
UHGV-1559856	No	10,220 bps	60.81%	23.27%	0.9826