vOTU-000641

Overview

vOTU representative UHGV-0204423

No. of genomes 31

Genome length 45,454 bps

Completeness 100.00% (complete)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000641
Number of genomes	31
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00027 › vSUBFAM-00268 › vGENUS-20030 › vSUBGEN-39171 › vOTU-000641
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204423
BioSample	NA
Genome length	45,454 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	72
CDS density	92.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204423_1	eggNOG-mapper	1235797.C816_04174	NA	NA
UHGV-0204423_1	Structural annotation	PF14600	NA	NA
UHGV-0204423_3	PHROG	phrog_11303	tail fiber protein	tail
UHGV-0204423_3	eggNOG-mapper	1123288.SOV_2c10820	Phage Tail Collar Domain	NA
UHGV-0204423_3	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-0204423_3	COG	COG4675	Phage tail collar domain	NA
UHGV-0204423_4	PHROG	phrog_587	structural protein	head and packaging
UHGV-0204423_4	UniRef90	UniRef90_A0A0U1KW84	Putative bacteriophage protein	NA
UHGV-0204423_4	eggNOG-mapper	1123288.SOV_2c10810	NA	NA
UHGV-0204423_4	Pfam	PF11041	NA	DUF2612
UHGV-0204423_4	Structural annotation	PF11041, TIGR02242, COG3948	NA	NA
UHGV-0204423_5	PHROG	phrog_6	baseplate protein	tail
UHGV-0204423_5	UniRef90	UniRef90_UPI00156BA425	baseplate J/gp47 family protein	NA
UHGV-0204423_5	eggNOG-mapper	1123288.SOV_2c10800	Baseplate J-like protein	NA
UHGV-0204423_5	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0204423_5	COG	COG3299	NA	NA
UHGV-0204423_5	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0204423_6	PHROG	phrog_120	baseplate protein	tail
UHGV-0204423_6	UniRef90	UniRef90_UPI00045D3201	bacteriophage protein	NA
UHGV-0204423_6	eggNOG-mapper	104623.Ser39006_04143	NA	NA
UHGV-0204423_6	Structural annotation	PF10934, TIGR03357, COG3628	NA	NA
UHGV-0204423_7	UniRef90	UniRef90_G9XHG7	Gp138_N domain-containing protein	NA
UHGV-0204423_7	eggNOG-mapper	1123288.SOV_2c10780	Baseplate assembly protein	NA
UHGV-0204423_7	Pfam	PF18352	NA	Gp138_N
UHGV-0204423_7	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-0204423_7	Structural annotation	PF18352, TIGR01644, COG4540	NA	NA
UHGV-0204423_10	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0204423_10	PHROG	phrog_20677	NA	unknown function
UHGV-0204423_10	UniRef90	UniRef90_A0A4Z0QZJ2	LYZ2 domain-containing protein	NA
UHGV-0204423_10	eggNOG-mapper	748727.CLJU_c36460	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0204423_10	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0204423_10	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0204423_10	Structural annotation	PF01551, PF05113, MF_00664, NF033848, NF040883, COG0739, COG3500	NA	NA
UHGV-0204423_11	eggNOG-mapper	1196322.A370_02020	NA	NA
UHGV-0204423_12	PHROG	phrog_817	tail fiber protein	tail
UHGV-0204423_12	UniRef90	UniRef90_G2JBI6	Putative phage-related protein	NA
UHGV-0204423_12	eggNOG-mapper	546271.Selsp_1321	NA	NA
UHGV-0204423_12	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-0204423_12	Structural annotation	PF21821, TIGR01633, COG3499	NA	NA
UHGV-0204423_13	PHROG	phrog_22539	NA	unknown function
UHGV-0204423_13	eggNOG-mapper	546271.Selsp_1322	NA	NA
UHGV-0204423_14	eggNOG-mapper	1123288.SOV_2c10720	NA	NA
UHGV-0204423_14	Pfam	PF21822	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
UHGV-0204423_14	Structural annotation	PF21822	NA	NA
UHGV-0204423_15	PHROG	phrog_280	virion structural protein	head and packaging
UHGV-0204423_15	UniRef90	UniRef90_UPI00078022D8	NA	NA
UHGV-0204423_15	eggNOG-mapper	1211817.CCAT010000003_gene226	NA	NA
UHGV-0204423_15	Pfam	PF11681	Bacteriophage KPP10, Structural protein ORF10	KPP10_Orf10
UHGV-0204423_15	Structural annotation	PF11681, TIGR02241, COG5437	NA	NA
UHGV-0204423_16	PHROG	phrog_205	virion structural protein	head and packaging
UHGV-0204423_16	UniRef90	UniRef90_UPI0004F394B9	NA	NA
UHGV-0204423_16	eggNOG-mapper	1392540.P256_00701	NA	NA
UHGV-0204423_16	Pfam	PF11863	NA	DUF3383
UHGV-0204423_16	Structural annotation	PF11863, COG3497	NA	NA
UHGV-0204423_17	PHROG	phrog_1973	NA	unknown function
UHGV-0204423_17	eggNOG-mapper	1123288.SOV_2c10680	NA	NA
UHGV-0204423_17	Structural annotation	PF06141	NA	NA
UHGV-0204423_18	PHROG	phrog_939	head protein	head and packaging
UHGV-0204423_18	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0204423_19	PHROG	phrog_222	tail protein	tail
UHGV-0204423_19	UniRef90	UniRef90_C9LU87	Putative bacteriophage protein	NA
UHGV-0204423_19	eggNOG-mapper	546271.Selsp_1328	NA	NA
UHGV-0204423_20	PHROG	phrog_302	virion structural protein	head and packaging
UHGV-0204423_20	UniRef90	UniRef90_J4UZ93	PF13262 family protein	NA
UHGV-0204423_20	eggNOG-mapper	864563.HMPREF9166_1250	NA	NA
UHGV-0204423_20	Pfam	PF13262	NA	DUF4054
UHGV-0204423_20	Structural annotation	PF13262	NA	NA
UHGV-0204423_22	PHROG	phrog_264	major head protein	head and packaging
UHGV-0204423_22	UniRef90	UniRef90_UPI00156AD629	NA	NA
UHGV-0204423_22	eggNOG-mapper	1415774.U728_3749	NA	NA
UHGV-0204423_22	Pfam	PF09950	NA	DUF2184
UHGV-0204423_22	COG	COG4834	NA	NA
UHGV-0204423_22	Structural annotation	PF09950, MF_04113, TIGR01554, COG4834	NA	NA
UHGV-0204423_23	PHROG	phrog_563	virion structural protein	head and packaging
UHGV-0204423_23	eggNOG-mapper	1415774.U728_3750	NA	NA
UHGV-0204423_23	Structural annotation	PF09956	NA	NA
UHGV-0204423_25	KOfam	K09960	NA	NA
UHGV-0204423_25	PHROG	phrog_16985	NA	unknown function
UHGV-0204423_25	UniRef90	UniRef90_UPI0015930320	NA	NA
UHGV-0204423_25	eggNOG-mapper	1196322.A370_02033	NA	NA
UHGV-0204423_25	Pfam	PF09979	NA	DUF2213
UHGV-0204423_25	COG	COG3566	NA	NA
UHGV-0204423_25	Structural annotation	PF09979, TIGR01543, COG3566	NA	NA
UHGV-0204423_29	PHROG	phrog_324	head morphogenesis	head and packaging
UHGV-0204423_29	UniRef90	UniRef90_A0A0C3MBK6	Phage_Mu_F domain-containing protein	NA
UHGV-0204423_29	eggNOG-mapper	1415774.U728_3754	Phage Mu protein F like protein	NA
UHGV-0204423_29	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0204423_29	COG	COG2369	NA	NA
UHGV-0204423_29	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-0204423_31	PHROG	phrog_16619	minor head protein	head and packaging
UHGV-0204423_31	UniRef90	UniRef90_A0A2N5ISM8	NAD(+)--protein-arginine ADP-ribosyltransferase	NA
UHGV-0204423_31	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0204423_33	KOfam	K08304	mltA; membrane-bound lytic murein transglycosylase A [EC:4.2.2.-]	NA
UHGV-0204423_33	PHROG	phrog_22529	NA	unknown function
UHGV-0204423_33	UniRef90	UniRef90_A0A6N7SPP5	SH3 domain-containing protein	NA
UHGV-0204423_33	eggNOG-mapper	1007096.BAGW01000031_gene115	3D domain	NA
UHGV-0204423_33	Pfam	PF06725	3D domain	3D
UHGV-0204423_33	COG	COG3584	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	NA
UHGV-0204423_33	Structural annotation	NF040675, COG3584	NA	NA
UHGV-0204423_36	KOfam	K09961	NA	NA
UHGV-0204423_36	PHROG	phrog_146	portal protein	head and packaging
UHGV-0204423_36	UniRef90	UniRef90_J5I3B7	Phage-associated protein, HI1409 family	NA
UHGV-0204423_36	eggNOG-mapper	936573.HMPREF1147_1323	NA	NA
UHGV-0204423_36	Pfam	PF06381	Anti-CBASS protein Acb1-like	Abc1-like
UHGV-0204423_36	NCBIFam	TIGR01555.1	phage-associated protein, HI1409 family	NA
UHGV-0204423_36	COG	COG3567	NA	NA
UHGV-0204423_36	Structural annotation	PF06381, MF_04135, TIGR01555, COG3567	NA	NA
UHGV-0204423_37	Structural annotation	PF00210, MF_01441, NF041388, COG0783	NA	NA
UHGV-0204423_39	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0204423_39	PHROG	phrog_10250	NA	unknown function
UHGV-0204423_39	UniRef90	UniRef90_A0A6C0QTU4	Phage terminase, large subunit, PBSX family	NA
UHGV-0204423_39	eggNOG-mapper	749413.E5DV50_9VIRU	Terminase-like family	NA
UHGV-0204423_39	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0204423_39	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0204423_39	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0204423_41	eggNOG-mapper	1120998.AUFC01000017_gene114	Probable zinc-ribbon domain	NA
UHGV-0204423_41	Pfam	PF13451	Probable zinc-ribbon domain	zf-trcl
UHGV-0204423_41	COG	COG1278	Cold shock protein, CspA family	NA
UHGV-0204423_41	Structural annotation	PF13451	NA	NA
UHGV-0204423_42	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0204423_42	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0204423_42	UniRef90	UniRef90_A0A1E5L8G9	Terminase	NA
UHGV-0204423_42	eggNOG-mapper	1567015.A0A0A7S1A8_9VIRU	Terminase small subunit	NA
UHGV-0204423_42	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0204423_42	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0204423_43	Structural annotation	PF14084	NA	NA
UHGV-0204423_44	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0204423_44	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0204423_44	UniRef90	UniRef90_R6Z2B0	Ribonuclease H	NA
UHGV-0204423_44	eggNOG-mapper	656519.Halsa_1618	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	NA
UHGV-0204423_44	Pfam	PF00075	RNase H	RNase_H
UHGV-0204423_44	COG	COG0328	Ribonuclease HI	NA
UHGV-0204423_44	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0204423_45	Structural annotation	PF18066	NA	NA
UHGV-0204423_47	Structural annotation	PF18994	NA	NA
UHGV-0204423_48	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0204423_50	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0204423_51	PHROG	phrog_1706	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
UHGV-0204423_51	Pfam	PF01930	NA	Cas_Cas4
UHGV-0204423_51	Structural annotation	PF01930, MF_03030, TIGR00372, COG5377	NA	NA
UHGV-0204423_52	PHROG	phrog_23240	NA	unknown function
UHGV-0204423_53	KOfam	K03553	recA; recombination protein RecA	NA
UHGV-0204423_53	PHROG	phrog_97	UvsX-like recombinase	other
UHGV-0204423_53	UniRef90	UniRef90_A0A2A4SWA0	Protein RecA	NA
UHGV-0204423_53	eggNOG-mapper	1188236.MARG_3940	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	NA
UHGV-0204423_53	Pfam	PF00154	recA bacterial DNA recombination protein	RecA
UHGV-0204423_53	COG	COG0468	RecA/RadA recombinase	NA
UHGV-0204423_53	Structural annotation	PF00154, MF_00268, TIGR02012, COG0468	NA	NA
UHGV-0204423_54	KOfam	K02337	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	NA
UHGV-0204423_54	PHROG	phrog_405	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0204423_54	UniRef90	UniRef90_A0A843GPT9	DNA-directed DNA polymerase	NA
UHGV-0204423_54	eggNOG-mapper	204536.SULAZ_0041	TIGRFAM DNA polymerase III, alpha subunit	NA
UHGV-0204423_54	Pfam	PF02811	PHP domain	PHP
UHGV-0204423_54	Pfam	PF07733	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
UHGV-0204423_54	Pfam	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
UHGV-0204423_54	Pfam	PF14579	Helix-hairpin-helix motif	HHH_6
UHGV-0204423_54	NCBIFam	TIGR00594.1	DNA polymerase III subunit alpha	NA
UHGV-0204423_54	COG	COG0587	DNA polymerase III, alpha subunit	NA
UHGV-0204423_54	Structural annotation	PF07733, PF02811, PF17657, PF14579, MF_01902, TIGR00594, COG0587	NA	NA
UHGV-0204423_56	KOfam	K00560	thyA, TYMS; thymidylate synthase [EC:2.1.1.45]	NA
UHGV-0204423_56	PHROG	phrog_5131	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0204423_56	UniRef90	UniRef90_UPI0016505AA6	thymidylate synthase	NA
UHGV-0204423_56	eggNOG-mapper	1408254.T458_24480	Thymidylate synthase	NA
UHGV-0204423_56	Pfam	PF00303	Thymidylate synthase	Thymidylat_synt
UHGV-0204423_56	COG	COG0207	Thymidylate synthase	NA
UHGV-0204423_56	Structural annotation	PF00303, MF_00008, NF002497, COG0207	NA	NA
UHGV-0204423_58	KOfam	K22226	ahbC; Fe-coproporphyrin III synthase	NA
UHGV-0204423_58	PHROG	phrog_1802	radical SAM domain-containing protein	other
UHGV-0204423_58	UniRef90	UniRef90_A0A518CAW6	GTP 3',8-cyclase	NA
UHGV-0204423_58	eggNOG-mapper	530564.Psta_2345	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	NA
UHGV-0204423_58	PADLOC	pVip-lone	Viperins not associated with kinases	Viperin
UHGV-0204423_58	Pfam	PF04055	Radical SAM superfamily	Radical_SAM
UHGV-0204423_58	COG	COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	NA
UHGV-0204423_59	PHROG	phrog_761	thymidylate kinase	other
UHGV-0204423_59	Pfam	PF02223	Thymidylate kinase	Thymidylate_kin
UHGV-0204423_59	COG	COG0125	Thymidylate kinase	NA
UHGV-0204423_60	PHROG	phrog_173	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UHGV-0204423_60	UniRef90	UniRef90_A0A829ZWM6	dUTPase	NA
UHGV-0204423_60	Pfam	PF08761	dUTPase	dUTPase_2
UHGV-0204423_60	Structural annotation	PF12643, MF_01020, NF001610, COG0140	NA	NA
UHGV-0204423_61	Structural annotation	PF08804	NA	NA
UHGV-0204423_65	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0204423_65	PHROG	phrog_47	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0204423_65	UniRef90	UniRef90_A0A843GN62	Toprim domain-containing protein	NA
UHGV-0204423_65	eggNOG-mapper	984892.SPSE_1227	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	NA
UHGV-0204423_65	PADLOC	drt-UG29	DRT	DRT
UHGV-0204423_65	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0204423_65	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0204423_65	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0204423_65	Structural annotation	PF01807, PF08275, MF_00974, TIGR01391, COG0358	NA	NA
UHGV-0204423_68	Pfam	PF10979	NA	DUF2786
UHGV-0204423_68	Structural annotation	PF10979, MF_00757	NA	NA
UHGV-0204423_69	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0204423_69	PHROG	phrog_670	endolysin	lysis
UHGV-0204423_69	UniRef90	UniRef90_A0A810QAT9	SLH domain-containing protein	NA
UHGV-0204423_69	eggNOG-mapper	1226322.HMPREF1545_00070	Ami_2	NA
UHGV-0204423_69	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0204423_69	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0204423_69	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0204423_70	PHROG	phrog_13256	NA	unknown function
UHGV-0204423_70	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-0204423_71	PHROG	phrog_23092	NA	unknown function
UHGV-0204423_71	eggNOG-mapper	1226322.HMPREF1545_02839	NA	NA
UHGV-0204423_72	PHROG	phrog_1863	NA	unknown function
UHGV-0204423_72	eggNOG-mapper	748224.HMPREF9436_00408	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204423	Yes	45,454 bps	34.12%	100.00%	0.9475
UHGV-1375996	No	45,418 bps	34.42%	100.00%	0.9200
UHGV-0093583	No	44,918 bps	34.34%	100.00%	0.9489
UHGV-1376091	No	44,918 bps	34.34%	100.00%	0.9505
UHGV-1373651	No	44,588 bps	34.23%	100.00%	0.9386
UHGV-0119129	No	44,417 bps	34.18%	100.00%	0.9401
UHGV-0383130	No	44,417 bps	34.18%	100.00%	0.9401
UHGV-1369154	No	44,195 bps	34.23%	100.00%	0.9370
UHGV-1369873	No	44,195 bps	34.23%	100.00%	0.9456
UHGV-0273539	No	44,178 bps	34.27%	100.00%	0.9399
UHGV-1379791	No	44,125 bps	34.35%	100.00%	0.9507
UHGV-2198974	No	43,326 bps	33.98%	100.00%	0.9432
UHGV-0110124	No	61,036 bps	40.49%	99.90%	0.9627
UHGV-1360323	No	44,741 bps	34.14%	99.61%	0.9491
UHGV-1449758	No	44,671 bps	34.23%	99.45%	0.9445
UHGV-1490790	No	44,587 bps	34.19%	99.26%	0.9425
UHGV-1488252	No	44,488 bps	34.23%	99.04%	0.9383
UHGV-1920324	No	44,449 bps	34.21%	98.96%	0.9095
UHGV-2014950	No	44,236 bps	34.36%	98.48%	0.9503
UHGV-2108790	No	43,895 bps	34.85%	97.72%	0.9428
UHGV-2049666	No	43,592 bps	34.07%	97.05%	0.9317
UHGV-1495753	No	42,837 bps	34.09%	95.37%	0.9494
UHGV-0072027	No	37,869 bps	34.40%	84.31%	0.9546
UHGV-1430468	No	31,007 bps	34.75%	69.03%	0.9650
UHGV-0071985	No	30,121 bps	34.61%	67.06%	0.9467
UHGV-1386227	No	30,121 bps	34.61%	67.06%	0.9467
UHGV-0092033	No	29,423 bps	34.13%	65.50%	0.9360
UHGV-1402578	No	27,442 bps	34.16%	61.09%	0.9437
UHGV-1567538	No	16,398 bps	33.21%	36.51%	0.8687
UHGV-1690084	No	14,386 bps	33.35%	32.03%	0.7983
UHGV-1576437	No	11,857 bps	34.32%	26.40%	0.9697