vOTU-000654

Overview

vOTU representative UHGV-0291959

No. of genomes 33

Genome length 42,794 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000654
Number of genomes	33
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-00034 › vSUBGEN-45820 › vOTU-000654
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0291959
BioSample	NA
Genome length	42,794 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	73
CDS density	88.73%
tRNA count	3
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0291959_1	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0291959_1	UniRef90	UniRef90_A0A6N7TNN9	NA	NA
UHGV-0291959_1	eggNOG-mapper	748224.HMPREF9436_01463	NA	NA
UHGV-0291959_1	Pfam	PF07374	NA	DUF1492
UHGV-0291959_1	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-0291959_3	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0291959_3	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0291959_3	UniRef90	UniRef90_A0A6N7TND6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0291959_3	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-0291959_3	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0291959_3	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0291959_3	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0291959_4	PHROG	phrog_3136	NA	unknown function
UHGV-0291959_4	UniRef90	UniRef90_UPI001C02A61B	ASCH domain-containing protein	NA
UHGV-0291959_4	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0291959_4	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0291959_7	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0291959_7	UniRef90	UniRef90_A0A417JTT5	DNA cytosine methyltransferase	NA
UHGV-0291959_7	eggNOG-mapper	1095750.HMPREF9970_0173	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0291959_7	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0291959_7	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0291959_10	UniRef90	UniRef90_A0A417H740	NA	NA
UHGV-0291959_11	Structural annotation	PF11417	NA	NA
UHGV-0291959_12	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0291959_12	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0291959_12	UniRef90	UniRef90_A0A844D5V0	DnaD domain protein	NA
UHGV-0291959_12	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-0291959_12	Pfam	PF19808	NA	DUF6291
UHGV-0291959_12	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0291959_12	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0291959_12	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-0291959_13	UniRef90	UniRef90_UPI001CBB85F6	single-stranded DNA-binding protein	NA
UHGV-0291959_13	Structural annotation	PF00436, MF_00720, NF004512, COG0629	NA	NA
UHGV-0291959_14	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0291959_14	UniRef90	UniRef90_A0A3A6EAW6	Phage recombination protein Bet	NA
UHGV-0291959_14	eggNOG-mapper	1235794.C811_01355	RecT family	NA
UHGV-0291959_14	Pfam	PF03837	RecT family	RecT
UHGV-0291959_14	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0291959_14	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0291959_14	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0291959_15	PHROG	phrog_674	NA	unknown function
UHGV-0291959_15	UniRef90	UniRef90_A0A3A6E846	NA	NA
UHGV-0291959_15	eggNOG-mapper	556268.OFAG_00840	NA	NA
UHGV-0291959_15	Pfam	PF07083	NA	DUF1351
UHGV-0291959_15	Structural annotation	PF07083	NA	NA
UHGV-0291959_17	Structural annotation	PF09537	NA	NA
UHGV-0291959_18	Structural annotation	PF12270, NF040944	NA	NA
UHGV-0291959_19	Structural annotation	PF10743, NF033787	NA	NA
UHGV-0291959_20	PHROG	phrog_4433	NA	unknown function
UHGV-0291959_20	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0291959_21	PHROG	phrog_15946	NA	unknown function
UHGV-0291959_21	eggNOG-mapper	1041147.AUFB01000014_gene330	NA	NA
UHGV-0291959_22	PHROG	phrog_4652	NA	unknown function
UHGV-0291959_22	eggNOG-mapper	397290.C810_01459	NA	NA
UHGV-0291959_22	Structural annotation	TIGR02582, COG1604	NA	NA
UHGV-0291959_23	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0291959_23	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0291959_23	UniRef90	UniRef90_A0A6N7TLD1	Phage antirepressor Ant	NA
UHGV-0291959_23	eggNOG-mapper	1230342.CTM_16892	Phage antirepressor protein	NA
UHGV-0291959_23	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-0291959_23	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0291959_23	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0291959_23	Structural annotation	PF03374, PF08346, TIGR02681, COG3561, COG3645	NA	NA
UHGV-0291959_24	UniRef90	UniRef90_UPI0018995761	helix-turn-helix transcriptional regulator	NA
UHGV-0291959_25	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0291959_25	UniRef90	UniRef90_A0A2N2CQC6	XRE family transcriptional regulator	NA
UHGV-0291959_25	eggNOG-mapper	1226322.HMPREF1545_00148	Transcriptional	NA
UHGV-0291959_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0291959_25	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0291959_25	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0291959_27	PHROG	phrog_888	NA	unknown function
UHGV-0291959_27	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-0291959_27	eggNOG-mapper	1151292.QEW_1347	Short C-terminal domain	NA
UHGV-0291959_27	Pfam	PF14471	NA	DUF4428
UHGV-0291959_27	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-0291959_27	Structural annotation	PF15947, PF14471	NA	NA
UHGV-0291959_30	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-0291959_30	eggNOG-mapper	266265.Bxe_A3948	Helix-turn-helix domain	NA
UHGV-0291959_30	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0291959_30	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0291959_30	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-0291959_31	KOfam	K14059	int; integrase	NA
UHGV-0291959_31	PHROG	phrog_1	integrase	integration and excision
UHGV-0291959_31	UniRef90	UniRef90_A0A6N7TNQ4	Tyrosine-type recombinase/integrase	NA
UHGV-0291959_31	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-0291959_31	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0291959_31	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0291959_31	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0291959_33	Structural annotation	PF12510	NA	NA
UHGV-0291959_34	PHROG	phrog_20016	NA	unknown function
UHGV-0291959_34	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0291959_34	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0291959_34	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0291959_35	PHROG	phrog_16490	NA	unknown function
UHGV-0291959_35	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0291959_36	PHROG	phrog_22984	NA	unknown function
UHGV-0291959_37	PHROG	phrog_21718	NA	unknown function
UHGV-0291959_37	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0291959_38	PHROG	phrog_3754	NA	unknown function
UHGV-0291959_38	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-0291959_40	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0291959_40	Structural annotation	PF13560, NF040522	NA	NA
UHGV-0291959_41	Structural annotation	PF04545, MF_00245, NF001074, COG2739	NA	NA
UHGV-0291959_43	Structural annotation	PF07870, MF_01506	NA	NA
UHGV-0291959_44	PHROG	phrog_15303	NA	unknown function
UHGV-0291959_44	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-0291959_46	KOfam	K07273	acm; lysozyme	NA
UHGV-0291959_46	PHROG	phrog_291	endolysin	lysis
UHGV-0291959_46	UniRef90	UniRef90_E2ZES5	Glycosyl hydrolase family 25	NA
UHGV-0291959_46	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-0291959_46	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0291959_46	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0291959_46	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0291959_47	PHROG	phrog_1382	NA	unknown function
UHGV-0291959_47	eggNOG-mapper	411468.CLOSCI_00272	NA	NA
UHGV-0291959_49	PHROG	phrog_9534	head protein	head and packaging
UHGV-0291959_49	eggNOG-mapper	748224.HMPREF9436_01407	COG NOG18825 non supervised orthologous group	NA
UHGV-0291959_50	PHROG	phrog_3558	tail protein	tail
UHGV-0291959_50	UniRef90	UniRef90_R9C6X0	Phage minor structural protein	NA
UHGV-0291959_50	eggNOG-mapper	1035184.HMPREF1042_1326	Prophage endopeptidase tail	NA
UHGV-0291959_50	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0291959_50	COG	COG4926	Phage-related protein	NA
UHGV-0291959_50	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0291959_51	UniRef90	UniRef90_A0A417QGC1	MtfA protein	NA
UHGV-0291959_51	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-0291959_51	COG	COG4722	Phage-related protein YomH	NA
UHGV-0291959_51	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-0291959_52	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-0291959_52	UniRef90	UniRef90_A0A6N7TLD3	Tape measure protein	NA
UHGV-0291959_52	eggNOG-mapper	662755.CRES_0873	phage tail tape measure protein	NA
UHGV-0291959_52	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0291959_52	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0291959_52	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0291959_52	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0291959_55	PHROG	phrog_885	major tail protein	tail
UHGV-0291959_55	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0291959_55	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0291959_56	Structural annotation	PF13554	NA	NA
UHGV-0291959_57	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-0291959_57	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0291959_59	PHROG	phrog_544	major head protein	head and packaging
UHGV-0291959_59	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-0291959_59	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0291959_59	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0291959_62	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0291959_62	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-0291959_62	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0291959_62	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0291959_62	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0291959_62	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0291959_63	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0291959_63	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0291959_63	UniRef90	UniRef90_A0A396LJD2	Bro-N domain-containing protein	NA
UHGV-0291959_63	eggNOG-mapper	663952.SDD27957_09050	COG3617 Prophage antirepressor	NA
UHGV-0291959_63	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0291959_63	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0291959_63	COG	COG3617	Prophage antirepressor	NA
UHGV-0291959_63	Structural annotation	PF02498, PF03374, TIGR02681, COG3617	NA	NA
UHGV-0291959_64	Structural annotation	PF07342	NA	NA
UHGV-0291959_66	UniRef90	UniRef90_R6LL89	HTH cro/C1-type domain-containing protein	NA
UHGV-0291959_66	eggNOG-mapper	1378168.N510_02489	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0291959_66	Pfam	PF20075	NA	DUF6471
UHGV-0291959_66	Structural annotation	PF13560, MF_00535, TIGR02612, COG1396	NA	NA
UHGV-0291959_67	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0291959_67	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-0291959_67	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0291959_67	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0291959_67	COG	COG2369	NA	NA
UHGV-0291959_67	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0291959_69	PHROG	phrog_64	portal protein	head and packaging
UHGV-0291959_69	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-0291959_69	eggNOG-mapper	642492.Clole_2764	phage portal protein, SPP1	NA
UHGV-0291959_69	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0291959_69	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0291959_70	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0291959_70	PHROG	phrog_10250	NA	unknown function
UHGV-0291959_70	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-0291959_70	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-0291959_70	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0291959_70	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0291959_70	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0291959_70	COG	COG1783	Phage terminase large subunit	NA
UHGV-0291959_70	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0291959_71	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0291959_71	UniRef90	UniRef90_UPI000AC737F1	helix-turn-helix domain containing protein	NA
UHGV-0291959_71	eggNOG-mapper	748224.HMPREF9436_03342	transposase activity	NA
UHGV-0291959_71	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0291959_72	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0291959_72	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0291959_72	UniRef90	UniRef90_A0A1H0YNW6	Methyltransferase	NA
UHGV-0291959_72	eggNOG-mapper	742823.HMPREF9465_00225	PFAM DNA methylase N-4 N-6	NA
UHGV-0291959_72	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0291959_72	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0291959_72	COG	COG0863	DNA modification methylase	NA
UHGV-0291959_72	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0291959_73	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0291959_73	UniRef90	UniRef90_E2ZNR4	ParB domain-containing protein	NA
UHGV-0291959_73	eggNOG-mapper	748224.HMPREF9436_03344	ParB-like nuclease domain	NA
UHGV-0291959_73	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0291959_73	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0291959_73	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0291959_73	Structural annotation	PF02195, TIGR00180, COG5119	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0291959	Yes	42,794 bps	54.60%	100.00%	0.9823
UHGV-1370600	No	42,631 bps	54.43%	100.00%	0.9804
UHGV-1354540	No	42,178 bps	54.89%	100.00%	0.9817
UHGV-1855500	No	42,114 bps	54.64%	100.00%	0.9818
UHGV-0142455	No	41,943 bps	54.74%	100.00%	0.9819
UHGV-0197833	No	41,943 bps	54.74%	100.00%	0.9823
UHGV-0361585	No	41,943 bps	54.74%	100.00%	0.9816
UHGV-1368376	No	41,943 bps	54.74%	100.00%	0.9816
UHGV-1858865	No	44,122 bps	54.88%	99.90%	0.9822
UHGV-0121917	No	42,638 bps	54.42%	99.90%	0.9802
UHGV-1498427	No	42,638 bps	54.42%	99.90%	0.9818
UHGV-1546703	No	42,390 bps	54.66%	99.90%	0.9822
UHGV-1386753	No	42,054 bps	54.71%	99.34%	0.9815
UHGV-0143914	No	42,019 bps	54.73%	99.26%	0.9818
UHGV-1425259	No	42,019 bps	54.73%	99.26%	0.9818
UHGV-1410652	No	37,427 bps	54.67%	88.39%	0.9815
UHGV-0149161	No	34,491 bps	55.25%	81.37%	0.9822
UHGV-1457543	No	34,491 bps	55.25%	81.37%	0.9822
UHGV-0054913	No	34,274 bps	54.48%	80.94%	0.9816
UHGV-1504946	No	33,210 bps	54.10%	78.45%	0.9805
UHGV-1401076	No	29,384 bps	55.22%	69.30%	0.9829
UHGV-1924565	No	27,046 bps	54.88%	63.99%	0.9810
UHGV-0101349	No	23,041 bps	55.10%	54.42%	0.9828
UHGV-1420678	No	23,041 bps	55.10%	54.42%	0.9828
UHGV-1755671	No	20,455 bps	55.15%	48.36%	0.9823
UHGV-1655472	No	18,336 bps	54.36%	43.37%	0.9814
UHGV-1737802	No	14,759 bps	55.48%	34.91%	0.9809
UHGV-0155245	No	14,407 bps	54.31%	34.05%	0.9819
UHGV-0157713	No	13,818 bps	55.55%	32.73%	0.9707
UHGV-1654998	No	12,508 bps	54.33%	29.55%	0.9822
UHGV-1559545	No	11,500 bps	56.31%	27.23%	0.9808
UHGV-0052587	No	10,314 bps	54.73%	24.38%	0.9814
UHGV-1722345	No	10,314 bps	54.73%	24.38%	0.9814