vOTU-000808

Overview

No. of genomes 18

Genome length 43,127 bps

Completeness 100.00% (complete)

Host UMGS1696 sp900753285

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000808
Number of genomes	18
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-01767 › vGENUS-02254 › vSUBGEN-07249 › vOTU-000808
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › CAG-272 › UMGS1696 › UMGS1696 sp900753285
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0336275
BioSample	SAMEA4813920
Genome length	43,127 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	75
CDS density	92.66%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0336275_1	PHROG	phrog_9534	head protein	head and packaging
UHGV-0336275_1	eggNOG-mapper	431943.CKL_2628	COG NOG18825 non supervised orthologous group	NA
UHGV-0336275_3	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0336275_3	PHROG	phrog_7767	metallo-endopeptidase	other
UHGV-0336275_3	UniRef90	UniRef90_A0A0W7TLV7	Peptidase_M23 domain-containing protein	NA
UHGV-0336275_3	eggNOG-mapper	665956.HMPREF1032_00102	heme binding	NA
UHGV-0336275_3	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0336275_3	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0336275_3	Structural annotation	PF01551, PF09992, NF040883, COG0739, COG3698	NA	NA
UHGV-0336275_4	eggNOG-mapper	411470.RUMGNA_00254	NA	NA
UHGV-0336275_5	UniRef90	UniRef90_A0A843IZ65	Sigma70_r4 domain-containing protein	NA
UHGV-0336275_5	Structural annotation	PF04545, MF_00245, NF001074, COG2739	NA	NA
UHGV-0336275_8	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-0336275_9	PHROG	phrog_3754	NA	unknown function
UHGV-0336275_9	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0336275_10	PHROG	phrog_21718	NA	unknown function
UHGV-0336275_10	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0336275_11	PHROG	phrog_22984	NA	unknown function
UHGV-0336275_12	PHROG	phrog_16490	NA	unknown function
UHGV-0336275_12	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0336275_14	PHROG	phrog_20016	NA	unknown function
UHGV-0336275_14	UniRef90	UniRef90_A0A2Z4QB67	Carbohydrate binding domain/collagen triple helix repeat protein	NA
UHGV-0336275_14	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0336275_14	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0336275_15	Structural annotation	PF12510	NA	NA
UHGV-0336275_16	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0336275_17	KOfam	K14059	int; integrase	NA
UHGV-0336275_17	PHROG	phrog_1	integrase	integration and excision
UHGV-0336275_17	UniRef90	UniRef90_A0A328U998	Site-specific integrase	NA
UHGV-0336275_17	eggNOG-mapper	887325.HMPREF0381_0346	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0336275_17	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0336275_17	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0336275_17	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0336275_18	eggNOG-mapper	1105029.HMPREF1137_1911	NA	NA
UHGV-0336275_18	Structural annotation	PF11631, TIGR03066	NA	NA
UHGV-0336275_19	UniRef90	UniRef90_A0A1Q6SAI0	HTH cro/C1-type domain-containing protein	NA
UHGV-0336275_19	eggNOG-mapper	556261.HMPREF0240_03592	Putative restriction endonuclease	NA
UHGV-0336275_19	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0336275_19	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-0336275_20	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0336275_20	UniRef90	UniRef90_A0A1H7R256	Helix-turn-helix domain-containing protein	NA
UHGV-0336275_20	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0336275_20	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0336275_20	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-0336275_26	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0336275_26	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0336275_26	UniRef90	UniRef90_A0A7X9G042	Helix-turn-helix transcriptional regulator	NA
UHGV-0336275_26	eggNOG-mapper	1121335.Clst_1876	Helix-turn-helix XRE-family like proteins	NA
UHGV-0336275_26	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0336275_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0336275_26	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0336275_26	Structural annotation	PF01381, NF041677, COG1396	NA	NA
UHGV-0336275_27	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0336275_27	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0336275_27	UniRef90	UniRef90_A0A133YTS1	Bro-N domain-containing protein	NA
UHGV-0336275_27	eggNOG-mapper	411471.SUBVAR_04667	BRO family, N-terminal domain	NA
UHGV-0336275_27	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0336275_27	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0336275_27	COG	COG3617	Prophage antirepressor	NA
UHGV-0336275_28	Pfam	PF20432	Antitoxin Xre-like helix-turn-helix domain	Xre-like-HTH
UHGV-0336275_30	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0336275_30	UniRef90	UniRef90_A0A6G7Y206	Phage recombination protein Bet	NA
UHGV-0336275_30	eggNOG-mapper	1122173.AXVL01000067_gene1959	DNA synthesis involved in double-strand break repair via homologous recombination	NA
UHGV-0336275_30	Pfam	PF03837	RecT family	RecT
UHGV-0336275_30	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0336275_30	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0336275_31	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0336275_31	UniRef90	UniRef90_UPI001C3A3B51	Siphovirus Gp157 family protein	NA
UHGV-0336275_31	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-0336275_31	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0336275_31	Structural annotation	PF05565	NA	NA
UHGV-0336275_32	PHROG	phrog_6251	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UHGV-0336275_32	UniRef90	UniRef90_K2PHK9	Phage replication protein	NA
UHGV-0336275_32	eggNOG-mapper	1231377.C426_1702	dnaD_dom DnaD domain protein	NA
UHGV-0336275_32	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0336275_32	Structural annotation	PF09681, PF07261, TIGR01714, TIGR01446, COG3935	NA	NA
UHGV-0336275_33	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-0336275_33	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0336275_35	Structural annotation	PF18129, NF000331	NA	NA
UHGV-0336275_36	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0336275_36	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-0336275_36	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0336275_36	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0336275_36	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0336275_39	PHROG	phrog_9300	NA	unknown function
UHGV-0336275_39	UniRef90	UniRef90_F2F2I1	Predicted ATPase	NA
UHGV-0336275_40	Structural annotation	PF06289, COG1582	NA	NA
UHGV-0336275_41	PHROG	phrog_7314	NA	unknown function
UHGV-0336275_42	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0336275_42	PHROG	phrog_1271	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0336275_42	UniRef90	UniRef90_UPI001A90E773	HNH endonuclease	NA
UHGV-0336275_42	eggNOG-mapper	1158609.I586_02595	HNH nucleases	NA
UHGV-0336275_42	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0336275_42	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0336275_42	Structural annotation	PF01844, NF008448, COG1403	NA	NA
UHGV-0336275_50	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0336275_50	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0336275_50	UniRef90	UniRef90_R6TSJ9	Single-stranded DNA-binding protein	NA
UHGV-0336275_50	eggNOG-mapper	445972.ANACOL_04434	Single-stranded DNA-binding protein	NA
UHGV-0336275_50	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0336275_50	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0336275_50	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0336275_50	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0336275_50	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0336275_51	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0336275_51	UniRef90	UniRef90_A0A1V5ZUM0	Endodeoxyribonuclease RusA	NA
UHGV-0336275_51	eggNOG-mapper	469604.HMPREF0946_00819	NA	NA
UHGV-0336275_51	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0336275_52	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0336275_52	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0336275_52	UniRef90	UniRef90_A0A1C5ZCG7	ParB/RepB/Spo0J family partition protein	NA
UHGV-0336275_52	eggNOG-mapper	411459.RUMOBE_01044	NA	NA
UHGV-0336275_52	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0336275_52	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0336275_52	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0336275_52	Structural annotation	PF02195, TIGR00180, COG5119	NA	NA
UHGV-0336275_53	PHROG	phrog_842	beta-glucosyl-HMC-alpha-glucosyltransferase	other
UHGV-0336275_53	eggNOG-mapper	508419.F8J156_9CAUD	NA	NA
UHGV-0336275_53	Pfam	PF20691	TET-Associated Glycosyltransferase	TAGT
UHGV-0336275_53	Structural annotation	PF20691, NF041865, COG1216	NA	NA
UHGV-0336275_55	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0336275_55	PHROG	phrog_10250	NA	unknown function
UHGV-0336275_55	UniRef90	UniRef90_A0A1I3QR69	Phage terminase, large subunit, PBSX family	NA
UHGV-0336275_55	eggNOG-mapper	748224.HMPREF9436_03341	Phage terminase, large subunit, PBSX family	NA
UHGV-0336275_55	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0336275_55	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0336275_55	COG	COG1783	Phage terminase large subunit	NA
UHGV-0336275_55	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0336275_56	PHROG	phrog_64	portal protein	head and packaging
UHGV-0336275_56	UniRef90	UniRef90_A0A856HZB4	Phage portal protein	NA
UHGV-0336275_56	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0336275_56	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0336275_56	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0336275_57	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0336275_57	UniRef90	UniRef90_A0A3D3Y165	Phage_Mu_F domain-containing protein	NA
UHGV-0336275_57	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0336275_57	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0336275_57	COG	COG2369	NA	NA
UHGV-0336275_57	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0336275_58	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0336275_58	UniRef90	UniRef90_A0A6A8M6L6	HK97 gp10 family phage protein	NA
UHGV-0336275_58	eggNOG-mapper	1540257.JQMW01000009_gene3375	NA	NA
UHGV-0336275_58	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0336275_58	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0336275_58	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0336275_60	PHROG	phrog_13589	NA	unknown function
UHGV-0336275_60	eggNOG-mapper	411471.SUBVAR_06929	ATPase involved in DNA repair	NA
UHGV-0336275_60	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-0336275_62	PHROG	phrog_30034	NA	unknown function
UHGV-0336275_62	UniRef90	UniRef90_A0A3D1XGA4	Chitin-binding type-3 domain-containing protein	NA
UHGV-0336275_62	eggNOG-mapper	1235796.C815_00903	NA	NA
UHGV-0336275_62	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0336275_63	UniRef90	UniRef90_UPI001F485105	branched-chain amino acid ABC transporter permease	NA
UHGV-0336275_63	eggNOG-mapper	1232453.BAIF02000013_gene3226	NA	NA
UHGV-0336275_64	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0336275_64	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-0336275_64	Structural annotation	PF06810	NA	NA
UHGV-0336275_65	PHROG	phrog_544	major head protein	head and packaging
UHGV-0336275_65	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-0336275_65	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0336275_65	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0336275_67	PHROG	phrog_17977	NA	unknown function
UHGV-0336275_67	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0336275_67	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0336275_68	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-0336275_68	Structural annotation	PF11367	NA	NA
UHGV-0336275_69	PHROG	phrog_885	major tail protein	tail
UHGV-0336275_69	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0336275_69	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0336275_69	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0336275_72	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0336275_72	PHROG	phrog_5493	tail length tape measure protein	tail
UHGV-0336275_72	eggNOG-mapper	1121334.KB911068_gene2299	Phage tail tape measure protein, TP901 family	NA
UHGV-0336275_72	COG	COG5283	Phage-related tail protein	NA
UHGV-0336275_73	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0336275_73	UniRef90	UniRef90_A0A564T4N7	Phage tail protein	NA
UHGV-0336275_73	eggNOG-mapper	748224.HMPREF9436_00700	Phage tail protein	NA
UHGV-0336275_73	Structural annotation	PF16774, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0336275_74	PHROG	phrog_538	minor tail protein	tail
UHGV-0336275_74	UniRef90	UniRef90_UPI0011064D4D	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0336275_74	eggNOG-mapper	755731.Clo1100_0557	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-0336275_74	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0336275_74	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0336275_75	PHROG	phrog_9534	head protein	head and packaging
UHGV-0336275_75	eggNOG-mapper	748224.HMPREF9436_00702	COG NOG18825 non supervised orthologous group	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0336275	Yes	43,127 bps	46.20%	100.00%	0.9815
UHGV-1371475	No	42,708 bps	46.09%	100.00%	0.9809
UHGV-1360401	No	42,179 bps	46.09%	100.00%	0.9803
UHGV-1324553	No	41,718 bps	46.35%	100.00%	0.9810
UHGV-1876654	No	40,499 bps	46.36%	100.00%	0.9818
UHGV-1365245	No	39,490 bps	46.26%	100.00%	0.9811
UHGV-1372836	No	37,687 bps	46.63%	100.00%	0.9813
UHGV-1515988	No	43,981 bps	46.34%	99.90%	0.9807
UHGV-0083857	No	41,391 bps	46.41%	99.90%	0.9803
UHGV-1467501	No	41,391 bps	46.41%	99.90%	0.9803
UHGV-1393555	No	32,473 bps	46.20%	79.95%	0.9810
UHGV-0056824	No	26,006 bps	46.91%	64.20%	0.9830
UHGV-1410480	No	26,006 bps	46.91%	64.20%	0.9830
UHGV-0053005	No	19,369 bps	45.53%	47.51%	0.9690
UHGV-1826772	No	17,996 bps	45.77%	44.14%	0.9694
UHGV-0108378	No	13,183 bps	46.63%	32.48%	0.9827
UHGV-0342806	No	10,763 bps	47.07%	26.56%	0.9827
UHGV-0105197	No	10,628 bps	46.12%	26.20%	0.9787