vOTU-000812

Overview

No. of genomes 29

Genome length 34,560 bps

Completeness 100.00% (complete)

Host Veillonella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000812
Number of genomes	29
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-00222 › vGENUS-00316 › vSUBGEN-02129 › vOTU-000812
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0178835
BioSample	SAMN07501297
Genome length	34,560 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	61
CDS density	92.75%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0178835_1	PHROG	phrog_12	portal protein	head and packaging
UHGV-0178835_1	eggNOG-mapper	1196031.ALEG01000039_gene1813	Portal protein	NA
UHGV-0178835_1	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0178835_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0178835_2	UniRef90	UniRef90_R5BEI0	Phage terminase large subunit	NA
UHGV-0178835_2	eggNOG-mapper	796940.HMPREF9628_00147	Phage Terminase	NA
UHGV-0178835_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0178835_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0178835_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0178835_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0178835_3	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0178835_3	UniRef90	UniRef90_R5BHQ7	Phage-related protein	NA
UHGV-0178835_3	eggNOG-mapper	755731.Clo1100_1159	phage terminase small subunit	NA
UHGV-0178835_3	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0178835_3	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0178835_3	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0178835_4	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0178835_4	UniRef90	UniRef90_R5BDT2	HNHc domain-containing protein	NA
UHGV-0178835_4	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0178835_6	UniRef90	UniRef90_A0A6N2ZRY1	HNH endonuclease	NA
UHGV-0178835_6	eggNOG-mapper	1123489.AUAN01000010_gene369	endonuclease activity	NA
UHGV-0178835_6	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0178835_6	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0178835_6	Structural annotation	COG1403	NA	NA
UHGV-0178835_7	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0178835_7	UniRef90	UniRef90_A0A6N2ZMD2	Sigma-70, region 4	NA
UHGV-0178835_7	eggNOG-mapper	706434.HMPREF9429_00383	NA	NA
UHGV-0178835_7	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0178835_7	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0178835_8	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0178835_8	UniRef90	UniRef90_UPI001F1C005B	NA	NA
UHGV-0178835_8	eggNOG-mapper	883156.HMPREF9282_01229	NA	NA
UHGV-0178835_8	Pfam	PF14359	NA	DUF4406
UHGV-0178835_8	Structural annotation	PF14359, TIGR03646, COG3613	NA	NA
UHGV-0178835_13	Pfam	PF09643	YopX protein	YopX
UHGV-0178835_13	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0178835_14	KOfam	K19232	btaE; hyaluronate-binding autotransporter adhesin	NA
UHGV-0178835_14	PHROG	phrog_10464	NA	unknown function
UHGV-0178835_14	UniRef90	UniRef90_A0A6N2ZGW5	Adhesin YadA	NA
UHGV-0178835_14	eggNOG-mapper	1128111.HMPREF0870_01786	Hep Hag repeat protein	NA
UHGV-0178835_14	Pfam	PF05658	YadA head domain repeat (2 copies)	YadA_head
UHGV-0178835_14	Pfam	PF05662	Coiled stalk of trimeric autotransporter adhesin	YadA_stalk
UHGV-0178835_14	Pfam	PF03895	YadA-like membrane anchor domain	YadA_anchor
UHGV-0178835_14	COG	COG5295	Autotransporter adhesin	NA
UHGV-0178835_14	Structural annotation	PF03895, NF033478, COG5295	NA	NA
UHGV-0178835_15	UniRef90	UniRef90_UPI00098A0DE3	helix-turn-helix domain-containing protein	NA
UHGV-0178835_15	Structural annotation	PF02796, TIGR04381, COG2771	NA	NA
UHGV-0178835_16	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0178835_16	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0178835_16	UniRef90	UniRef90_UPI00098A2438	single-stranded DNA-binding protein	NA
UHGV-0178835_16	eggNOG-mapper	1408422.JHYF01000019_gene1422	Single-stranded DNA-binding protein	NA
UHGV-0178835_16	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0178835_16	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0178835_16	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0178835_16	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0178835_16	Structural annotation	PF00436, MF_00984, NF005406, COG0629	NA	NA
UHGV-0178835_17	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0178835_17	UniRef90	UniRef90_A0A1I5LZL1	Relaxase/Mobilisation nuclease domain-containing protein	NA
UHGV-0178835_17	eggNOG-mapper	883156.HMPREF9282_01224	NA	NA
UHGV-0178835_17	Structural annotation	PF21578	NA	NA
UHGV-0178835_21	Structural annotation	PF09035, TIGR01764, COG3311	NA	NA
UHGV-0178835_26	UniRef90	UniRef90_UPI00098BCE66	helix-turn-helix domain-containing protein	NA
UHGV-0178835_26	eggNOG-mapper	699218.HMPREF0889_0316	NA	NA
UHGV-0178835_26	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0178835_27	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0178835_27	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0178835_27	UniRef90	UniRef90_J4RQU4	DNA-binding helix-turn-helix protein	NA
UHGV-0178835_27	eggNOG-mapper	479436.Vpar_0382	Helix-turn-helix domain protein	NA
UHGV-0178835_27	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0178835_27	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0178835_27	Structural annotation	PF13560, MF_02017, NF041951, COG3655	NA	NA
UHGV-0178835_28	PHROG	phrog_20936	NA	unknown function
UHGV-0178835_28	UniRef90	UniRef90_UPI001F0B7502	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0178835_28	Structural annotation	PF06114	NA	NA
UHGV-0178835_29	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0178835_29	PHROG	phrog_1412	antitoxin mazE-like	moron, auxiliary metabolic gene and host takeover
UHGV-0178835_29	UniRef90	UniRef90_A0A848EVS5	Type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0178835_29	eggNOG-mapper	546271.Selsp_1362	PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA
UHGV-0178835_29	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0178835_29	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0178835_29	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0178835_30	KOfam	K14059	int; integrase	NA
UHGV-0178835_30	PHROG	phrog_1	integrase	integration and excision
UHGV-0178835_30	UniRef90	UniRef90_A0A6N2ZQB7	Site-specific tyrosine recombinase XerC	NA
UHGV-0178835_30	eggNOG-mapper	546273.VEIDISOL_01041	Phage integrase family	NA
UHGV-0178835_30	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0178835_30	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0178835_30	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0178835_33	KOfam	K07273	acm; lysozyme	NA
UHGV-0178835_33	PHROG	phrog_291	endolysin	lysis
UHGV-0178835_33	UniRef90	UniRef90_UPI001D073E26	glycosyl hydrolase family 25	NA
UHGV-0178835_33	eggNOG-mapper	883156.HMPREF9282_01828	Glycosyl hydrolases family 25	NA
UHGV-0178835_33	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0178835_33	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0178835_33	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0178835_34	PHROG	phrog_27828	NA	unknown function
UHGV-0178835_34	UniRef90	UniRef90_F5KZP5	Conserved domain protein	NA
UHGV-0178835_34	eggNOG-mapper	1401067.HMPREF0872_00180	NA	NA
UHGV-0178835_35	PHROG	phrog_23091	NA	unknown function
UHGV-0178835_37	Structural annotation	PF21611	NA	NA
UHGV-0178835_38	KOfam	K14059	int; integrase	NA
UHGV-0178835_38	PHROG	phrog_1	integrase	integration and excision
UHGV-0178835_38	UniRef90	UniRef90_A0A6N3DZH6	Tyrosine recombinase XerD	NA
UHGV-0178835_38	eggNOG-mapper	1401067.HMPREF0872_00200	Belongs to the 'phage' integrase family	NA
UHGV-0178835_38	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0178835_38	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0178835_38	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0178835_38	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0178835_39	Structural annotation	PF09458	NA	NA
UHGV-0178835_41	Structural annotation	PF09458	NA	NA
UHGV-0178835_43	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0178835_43	UniRef90	UniRef90_UPI000F8D5867	phage tail protein	NA
UHGV-0178835_43	eggNOG-mapper	546273.VEIDISOL_00731	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0178835_43	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0178835_43	Structural annotation	PF12571	NA	NA
UHGV-0178835_44	PHROG	phrog_521	tail protein	tail
UHGV-0178835_44	UniRef90	UniRef90_UPI000F8DB9B6	NA	NA
UHGV-0178835_44	eggNOG-mapper	641107.CDLVIII_4355	NA	NA
UHGV-0178835_44	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0178835_44	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-0178835_44	Structural annotation	PF10076, NF000930, COG3778	NA	NA
UHGV-0178835_45	PHROG	phrog_6	baseplate protein	tail
UHGV-0178835_45	UniRef90	UniRef90_UPI000F8C5CEB	baseplate J/gp47 family protein	NA
UHGV-0178835_45	eggNOG-mapper	97138.C820_00599	Baseplate J-like protein	NA
UHGV-0178835_45	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0178835_45	COG	COG3299	NA	NA
UHGV-0178835_45	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0178835_46	PHROG	phrog_120	baseplate protein	tail
UHGV-0178835_46	UniRef90	UniRef90_UPI000F8EF05A	NA	NA
UHGV-0178835_46	eggNOG-mapper	97138.C820_00600	NA	NA
UHGV-0178835_46	Pfam	PF10934	NA	DUF2634
UHGV-0178835_46	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0178835_46	Structural annotation	PF10934, TIGR03357, COG3628	NA	NA
UHGV-0178835_47	PHROG	phrog_579	NA	unknown function
UHGV-0178835_47	UniRef90	UniRef90_UPI000F8C89A0	NA	NA
UHGV-0178835_47	eggNOG-mapper	632245.CLP_2905	NA	NA
UHGV-0178835_47	Pfam	PF10844	NA	DUF2577
UHGV-0178835_47	Structural annotation	PF10844	NA	NA
UHGV-0178835_48	PHROG	phrog_400	tail protein	tail
UHGV-0178835_48	eggNOG-mapper	883156.HMPREF9282_00657	PFAM Phage late control gene D protein (GPD)	NA
UHGV-0178835_48	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-0178835_48	Structural annotation	PF14594, PF05382, NF033848, COG4379	NA	NA
UHGV-0178835_49	PHROG	phrog_5184	NA	unknown function
UHGV-0178835_49	UniRef90	UniRef90_A0A6P1MGG2	Phage portal protein	NA
UHGV-0178835_49	eggNOG-mapper	1120998.AUFC01000013_gene2949	LysM domain	NA
UHGV-0178835_49	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0178835_49	Structural annotation	PF19266, TIGR02126, COG3499	NA	NA
UHGV-0178835_50	PHROG	phrog_7972	NA	unknown function
UHGV-0178835_50	UniRef90	UniRef90_A0A8G0NSD2	Phage tail protein	NA
UHGV-0178835_50	eggNOG-mapper	469617.FUAG_00846	tape measure	NA
UHGV-0178835_50	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0178835_50	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0178835_51	PHROG	phrog_4976	tail assembly chaperone	tail
UHGV-0178835_51	eggNOG-mapper	1095747.HMPREF1049_2003	NA	NA
UHGV-0178835_51	Structural annotation	PF08890, TIGR01674	NA	NA
UHGV-0178835_52	PHROG	phrog_365	tail protein	tail
UHGV-0178835_52	UniRef90	UniRef90_R5BEH1	PBSX prophage	NA
UHGV-0178835_52	eggNOG-mapper	393480.FNP_1694	Phage tail tube protein	NA
UHGV-0178835_52	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0178835_52	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0178835_53	PHROG	phrog_1480	tail sheath	tail
UHGV-0178835_53	UniRef90	UniRef90_R5BHP7	Phage_sheath_1C domain-containing protein	NA
UHGV-0178835_53	eggNOG-mapper	1095747.HMPREF1049_2005	Phage tail sheath C-terminal domain	NA
UHGV-0178835_53	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0178835_53	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0178835_54	PHROG	phrog_525	NA	unknown function
UHGV-0178835_54	eggNOG-mapper	293826.Amet_2419	NA	NA
UHGV-0178835_54	Pfam	PF20765	NA	DUF6838
UHGV-0178835_54	Structural annotation	PF20765, TIGR01633, COG5003	NA	NA
UHGV-0178835_55	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0178835_55	UniRef90	UniRef90_A0A7X2XHE9	HK97 gp10 family phage protein	NA
UHGV-0178835_55	eggNOG-mapper	293826.Amet_2418	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0178835_55	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0178835_55	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0178835_56	UniRef90	UniRef90_UPI0013E016C2	phage head closure protein	NA
UHGV-0178835_56	eggNOG-mapper	1196322.A370_05714	Phage head-tail adaptor	NA
UHGV-0178835_56	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0178835_56	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0178835_56	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0178835_56	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0178835_57	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0178835_57	UniRef90	UniRef90_UPI000F8E1CBE	head-tail connector protein	NA
UHGV-0178835_57	eggNOG-mapper	1285586.H131_21297	Phage gp6-like head-tail connector protein	NA
UHGV-0178835_57	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0178835_57	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0178835_58	PHROG	phrog_6865	NA	unknown function
UHGV-0178835_59	PHROG	phrog_10	major head protein	head and packaging
UHGV-0178835_59	UniRef90	UniRef90_R5BDS8	Phage major capsid protein	NA
UHGV-0178835_59	eggNOG-mapper	1285586.H131_21302	Phage major capsid protein, HK97 family	NA
UHGV-0178835_59	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0178835_59	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0178835_59	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0178835_59	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0178835_60	KOfam	K06904	NA	NA
UHGV-0178835_60	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0178835_60	UniRef90	UniRef90_UPI000F8EE1C5	HK97 family phage prohead protease	NA
UHGV-0178835_60	eggNOG-mapper	1414720.CBYM010000002_gene573	Phage prohead protease, HK97 family	NA
UHGV-0178835_60	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0178835_60	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0178835_60	COG	COG3740	Phage head maturation protease	NA
UHGV-0178835_60	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0178835_61	PHROG	phrog_12	portal protein	head and packaging
UHGV-0178835_61	UniRef90	UniRef90_UPI000F8DDB4D	phage portal protein	NA
UHGV-0178835_61	eggNOG-mapper	796940.HMPREF9628_00146	Portal protein	NA
UHGV-0178835_61	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0178835_61	COG	COG4695	Phage portal protein BeeE	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0178835	Yes	34,560 bps	35.69%	100.00%	0.9811
UHGV-0176732	No	34,560 bps	35.69%	100.00%	0.9803
UHGV-0180017	No	34,371 bps	35.82%	100.00%	0.9809
UHGV-0392007	No	34,371 bps	35.82%	100.00%	0.9809
UHGV-0173094	No	34,310 bps	35.95%	100.00%	0.9803
UHGV-0386542	No	34,310 bps	35.94%	100.00%	0.9803
UHGV-0386545	No	34,310 bps	35.94%	100.00%	0.9803
UHGV-0389710	No	30,294 bps	36.08%	100.00%	0.9817
UHGV-1444092	No	37,751 bps	35.59%	99.90%	0.9795
UHGV-0267477	No	37,700 bps	35.55%	99.90%	0.9809
UHGV-0129501	No	36,423 bps	35.49%	99.90%	0.9808
UHGV-0127067	No	35,530 bps	35.67%	99.90%	0.9796
UHGV-0150053	No	33,267 bps	35.76%	97.52%	0.9811
UHGV-0333468	No	33,023 bps	36.13%	96.78%	0.9811
UHGV-0137203	No	32,624 bps	36.26%	95.60%	0.9812
UHGV-1445247	No	28,313 bps	36.39%	82.98%	0.9800
UHGV-1485589	No	25,394 bps	36.37%	74.42%	0.9827
UHGV-1466266	No	23,937 bps	36.94%	70.13%	0.9822
UHGV-0300314	No	23,731 bps	36.69%	69.53%	0.9824
UHGV-1427102	No	22,869 bps	36.08%	67.03%	0.9822
UHGV-1477445	No	17,164 bps	36.87%	50.27%	0.9819
UHGV-1775065	No	16,548 bps	34.81%	47.63%	0.9789
UHGV-1805542	No	16,075 bps	36.72%	47.08%	0.9830
UHGV-1800754	No	15,997 bps	36.57%	46.85%	0.9822
UHGV-0142980	No	15,537 bps	35.70%	45.17%	0.9801
UHGV-0150823	No	13,998 bps	36.86%	41.03%	0.9831
UHGV-0208836	No	12,256 bps	37.00%	35.90%	0.9819
UHGV-1628978	No	12,209 bps	36.76%	35.76%	0.9834
UHGV-1745538	No	10,735 bps	37.10%	31.44%	0.9826