vOTU-000912

Overview

No. of genomes 28

Genome length 41,734 bps

Completeness 100.00% (complete)

Host Flavonifractor plautii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-000912
Number of genomes	28
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00367 › vGENUS-02638 › vSUBGEN-05710 › vOTU-000912
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Flavonifractor › Flavonifractor plautii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0333208
BioSample	SAMN06164859
Genome length	41,734 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	76
CDS density	91.38%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0333208_2	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0333208_2	eggNOG-mapper	548477.HMPREF0294_2478	Host cell surface-exposed lipoprotein	NA
UHGV-0333208_2	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0333208_2	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0333208_2	Structural annotation	PF07553, MF_01114, NF001062, COG2137	NA	NA
UHGV-0333208_3	KOfam	K14059	int; integrase	NA
UHGV-0333208_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0333208_3	UniRef90	UniRef90_A0A1C5W824	Integrase	NA
UHGV-0333208_3	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-0333208_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0333208_3	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0333208_3	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0333208_4	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0333208_5	PHROG	phrog_28802	NA	unknown function
UHGV-0333208_5	Structural annotation	PF12510	NA	NA
UHGV-0333208_6	PHROG	phrog_20016	NA	unknown function
UHGV-0333208_6	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0333208_6	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0333208_6	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0333208_7	PHROG	phrog_16490	NA	unknown function
UHGV-0333208_7	eggNOG-mapper	1226322.HMPREF1545_00076	NA	NA
UHGV-0333208_8	PHROG	phrog_22984	NA	unknown function
UHGV-0333208_9	PHROG	phrog_21718	NA	unknown function
UHGV-0333208_9	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0333208_10	PHROG	phrog_3754	NA	unknown function
UHGV-0333208_10	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-0333208_11	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0333208_12	KOfam	K10947	padR; PadR family transcriptional regulator, regulatory protein PadR	NA
UHGV-0333208_12	UniRef90	UniRef90_A0A6S6XBU7	PadR family transcriptional regulator	NA
UHGV-0333208_12	eggNOG-mapper	1105031.HMPREF1141_0637	Transcriptional regulator PadR-like family	NA
UHGV-0333208_12	Pfam	PF03551	Transcriptional regulator PadR-like family	PadR
UHGV-0333208_12	COG	COG1695	DNA-binding transcriptional regulator, PadR family	NA
UHGV-0333208_13	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0333208_13	PHROG	phrog_7698	endolysin	lysis
UHGV-0333208_13	UniRef90	UniRef90_R5HQL6	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0333208_13	eggNOG-mapper	1519439.JPJG01000059_gene1952	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0333208_13	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0333208_13	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0333208_13	Structural annotation	PF05203, PF01510, MF_04111, MF_01420, NF005852, COG1372	NA	NA
UHGV-0333208_16	PHROG	phrog_443	holin	lysis
UHGV-0333208_16	UniRef90	UniRef90_UPI00137A08C5	holin	NA
UHGV-0333208_16	eggNOG-mapper	397288.C806_00114	Putative lactococcus lactis phage r1t holin	NA
UHGV-0333208_16	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0333208_16	Structural annotation	PF16945	NA	NA
UHGV-0333208_17	PHROG	phrog_937	hemolysin	other
UHGV-0333208_17	eggNOG-mapper	445972.ANACOL_01873	NA	NA
UHGV-0333208_21	KOfam	K13276	bpr; bacillopeptidase F [EC:3.4.21.-]	NA
UHGV-0333208_21	PHROG	phrog_11157	NA	unknown function
UHGV-0333208_21	UniRef90	UniRef90_G9YSD2	Big_13 domain-containing protein	NA
UHGV-0333208_21	eggNOG-mapper	1235797.C816_02657	NA	NA
UHGV-0333208_21	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0333208_21	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0333208_21	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0333208_21	Structural annotation	PF09136, PF13750, MF_04116, NF032891, COG2372	NA	NA
UHGV-0333208_23	PHROG	phrog_13879	NA	unknown function
UHGV-0333208_23	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-0333208_23	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-0333208_24	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0333208_25	PHROG	phrog_23464	NA	unknown function
UHGV-0333208_25	UniRef90	UniRef90_A0A1C6CIN9	Phage-related protein	NA
UHGV-0333208_25	eggNOG-mapper	665950.HMPREF1025_02660	phage tail tape measure protein	NA
UHGV-0333208_25	Pfam	PF05017	TMP repeat	TMP
UHGV-0333208_25	COG	COG5283	Phage-related tail protein	NA
UHGV-0333208_25	Structural annotation	PF20155, COG5280	NA	NA
UHGV-0333208_27	PHROG	phrog_18646	NA	unknown function
UHGV-0333208_27	UniRef90	UniRef90_B6CXF0	Peptidase-colicin	NA
UHGV-0333208_28	PHROG	phrog_885	major tail protein	tail
UHGV-0333208_28	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0333208_28	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0333208_29	PHROG	phrog_17405	head protein	head and packaging
UHGV-0333208_29	Structural annotation	PF11367	NA	NA
UHGV-0333208_30	PHROG	phrog_1233	NA	unknown function
UHGV-0333208_30	UniRef90	UniRef90_UPI001C39EFB9	Dienelactone hydrolase family protein	NA
UHGV-0333208_30	eggNOG-mapper	357809.Cphy_2967	NA	NA
UHGV-0333208_31	PHROG	phrog_17977	NA	unknown function
UHGV-0333208_31	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0333208_31	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0333208_33	eggNOG-mapper	1226322.HMPREF1545_00051	NA	NA
UHGV-0333208_34	PHROG	phrog_544	major head protein	head and packaging
UHGV-0333208_34	UniRef90	UniRef90_A0A395X7A1	S-l_SbsC_C domain-containing protein	NA
UHGV-0333208_34	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0333208_34	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0333208_35	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0333208_35	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-0333208_35	Structural annotation	PF06810	NA	NA
UHGV-0333208_36	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0333208_36	UniRef90	UniRef90_A0A139QI12	HNH homing endonuclease	NA
UHGV-0333208_36	eggNOG-mapper	357276.EL88_11520	HNH endonuclease domain protein	NA
UHGV-0333208_36	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0333208_36	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0333208_36	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0333208_36	Pfam	PF07453	NUMOD1 domain	NUMOD1
UHGV-0333208_36	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-0333208_39	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0333208_39	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-0333208_39	eggNOG-mapper	1280685.AUKC01000004_gene1630	NA	NA
UHGV-0333208_39	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0333208_40	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0333208_40	UniRef90	UniRef90_A0A1C7FSE6	Phage_Mu_F domain-containing protein	NA
UHGV-0333208_40	eggNOG-mapper	945021.TEH_08610	Phage Mu protein F like protein	NA
UHGV-0333208_40	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0333208_40	COG	COG2369	NA	NA
UHGV-0333208_40	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0333208_41	PHROG	phrog_64	portal protein	head and packaging
UHGV-0333208_41	UniRef90	UniRef90_UPI0018A8A301	phage portal protein	NA
UHGV-0333208_41	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0333208_41	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0333208_41	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0333208_42	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0333208_42	PHROG	phrog_10250	NA	unknown function
UHGV-0333208_42	UniRef90	UniRef90_A0A3D3Y0N9	PBSX family phage terminase large subunit	NA
UHGV-0333208_42	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-0333208_42	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0333208_42	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0333208_42	COG	COG1783	Phage terminase large subunit	NA
UHGV-0333208_42	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0333208_43	UniRef90	UniRef90_U2R3C0	Nascent polypeptide-associated complex domain protein	NA
UHGV-0333208_43	eggNOG-mapper	1232443.BAIA02000078_gene38	NA	NA
UHGV-0333208_43	Structural annotation	PF13542	NA	NA
UHGV-0333208_44	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0333208_44	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-0333208_44	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0333208_47	PHROG	phrog_22543	NA	unknown function
UHGV-0333208_49	PHROG	phrog_38832	NA	unknown function
UHGV-0333208_49	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-0333208_53	PHROG	phrog_10714	NA	unknown function
UHGV-0333208_53	UniRef90	UniRef90_UPI001C3A10B1	Zinc ribbon domain-containing protein	NA
UHGV-0333208_53	eggNOG-mapper	1226322.HMPREF1545_00023	NA	NA
UHGV-0333208_54	PHROG	phrog_111	DNA methyltransferase	other
UHGV-0333208_54	UniRef90	UniRef90_UPI000B356992	adenine methyltransferase	NA
UHGV-0333208_54	eggNOG-mapper	1121121.KB894312_gene3179	DNA N-6-adenine-methyltransferase	NA
UHGV-0333208_54	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-0333208_54	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0333208_54	Structural annotation	PF05869, MF_03187, TIGR01712, COG2263	NA	NA
UHGV-0333208_55	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0333208_55	UniRef90	UniRef90_A0A6B4TI31	NUMOD4 domain-containing protein	NA
UHGV-0333208_55	eggNOG-mapper	1345695.CLSA_c30140	NUMOD4 motif	NA
UHGV-0333208_55	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0333208_55	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0333208_55	Structural annotation	PF07463	NA	NA
UHGV-0333208_56	PHROG	phrog_474	phosphofructokinase	other
UHGV-0333208_56	UniRef90	UniRef90_A0A2V2FHD6	NA	NA
UHGV-0333208_56	eggNOG-mapper	428125.CLOLEP_01367	NA	NA
UHGV-0333208_56	Pfam	PF19905	NA	DUF6378
UHGV-0333208_56	Structural annotation	PF19905	NA	NA
UHGV-0333208_57	Pfam	PF18912	Double zinc ribbon domain	DZR_2
UHGV-0333208_58	KOfam	K01494	dcd; dCTP deaminase [EC:3.5.4.13]	NA
UHGV-0333208_58	PHROG	phrog_1663	dCTP deaminase	DNA, RNA and nucleotide metabolism
UHGV-0333208_58	UniRef90	UniRef90_A0A3B9D5C2	dCTP deaminase, dUMP-forming	NA
UHGV-0333208_58	eggNOG-mapper	1121335.Clst_0069	TIGRFAM deoxycytidine triphosphate deaminase	NA
UHGV-0333208_58	Pfam	PF06559	2'-deoxycytidine 5'-triphosphate deaminase (DCD)	DCD
UHGV-0333208_58	NCBIFam	TIGR02274.1	dCTP deaminase	NA
UHGV-0333208_58	COG	COG0717	dCTP deaminase	NA
UHGV-0333208_58	HAMAP	MF_00146	dCTP deaminase, dUMP-forming [dcd]	NA
UHGV-0333208_58	Structural annotation	PF06559, MF_00146, TIGR02274, COG0717	NA	NA
UHGV-0333208_60	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0333208_60	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0333208_60	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0333208_60	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0333208_60	Structural annotation	PF02452, NF010262, COG2337	NA	NA
UHGV-0333208_61	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0333208_61	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0333208_61	UniRef90	UniRef90_A0A810Q3X8	IstB_IS21 domain-containing protein	NA
UHGV-0333208_61	eggNOG-mapper	445972.ANACOL_01829	NA	NA
UHGV-0333208_61	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0333208_61	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0333208_62	PHROG	phrog_13246	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-0333208_62	eggNOG-mapper	1031288.AXAA01000044_gene1970	NA	NA
UHGV-0333208_63	UniRef90	UniRef90_UPI001F4CC127	helix-turn-helix domain-containing protein	NA
UHGV-0333208_63	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0333208_63	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0333208_64	PHROG	phrog_18107	NA	unknown function
UHGV-0333208_64	UniRef90	UniRef90_UPI00058F46CC	NA	NA
UHGV-0333208_64	eggNOG-mapper	476272.RUMHYD_01739	NA	NA
UHGV-0333208_64	Structural annotation	PF05037	NA	NA
UHGV-0333208_65	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0333208_65	UniRef90	UniRef90_A0A1C5N4H2	Siphovirus Gp157	NA
UHGV-0333208_65	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-0333208_65	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0333208_65	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0333208_66	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0333208_66	UniRef90	UniRef90_A0A8J6P193	AAA family ATPase	NA
UHGV-0333208_66	eggNOG-mapper	1232453.BAIF02000010_gene3337	AAA domain	NA
UHGV-0333208_66	Pfam	PF13479	AAA domain	AAA_24
UHGV-0333208_66	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0333208_67	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0333208_67	UniRef90	UniRef90_UPI001D0641E0	NUMOD4 domain-containing protein	NA
UHGV-0333208_67	eggNOG-mapper	1527693.A0A096XV21_9CAUD	HNH endonuclease	NA
UHGV-0333208_67	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0333208_67	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0333208_67	Structural annotation	PF13392	NA	NA
UHGV-0333208_70	UniRef90	UniRef90_A0A8D9PDM8	Pyocin activator protein	NA
UHGV-0333208_71	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0333208_71	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0333208_71	UniRef90	UniRef90_A0A7U0DMG3	Helix-turn-helix transcriptional regulator	NA
UHGV-0333208_71	eggNOG-mapper	1121286.AUMT01000005_gene3314	Helix-turn-helix domain	NA
UHGV-0333208_71	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0333208_71	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0333208_71	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0333208_76	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0333208_76	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0333208_76	UniRef90	UniRef90_A0A1C6J7L0	Helix-turn-helix	NA
UHGV-0333208_76	eggNOG-mapper	411471.SUBVAR_05818	sequence-specific DNA binding	NA
UHGV-0333208_76	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0333208_76	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0333208_76	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0333208	Yes	41,734 bps	48.14%	100.00%	0.9765
UHGV-0076383	No	41,734 bps	48.14%	100.00%	0.9793
UHGV-0372420	No	41,734 bps	48.14%	100.00%	0.9793
UHGV-1356832	No	41,734 bps	48.14%	100.00%	0.9770
UHGV-0398973	No	41,639 bps	48.08%	100.00%	0.9794
UHGV-0435516	No	41,079 bps	48.23%	100.00%	0.9772
UHGV-0360823	No	40,382 bps	48.05%	100.00%	0.9788
UHGV-2207999	No	41,833 bps	48.16%	99.90%	0.9774
UHGV-0835690	No	33,680 bps	47.55%	82.80%	0.9764
UHGV-1504651	No	33,421 bps	48.68%	82.00%	0.9805
UHGV-0201092	No	27,200 bps	48.69%	66.79%	0.9795
UHGV-1482639	No	26,238 bps	48.87%	64.37%	0.9802
UHGV-1402221	No	25,112 bps	47.30%	61.68%	0.9800
UHGV-1421426	No	22,859 bps	48.88%	56.24%	0.9797
UHGV-0817953	No	21,044 bps	48.47%	51.76%	0.9783
UHGV-2189155	No	20,909 bps	48.55%	51.43%	0.9778
UHGV-0073418	No	19,309 bps	47.37%	47.33%	0.9714
UHGV-1998209	No	18,685 bps	49.38%	45.80%	0.9820
UHGV-1653396	No	18,523 bps	47.96%	45.43%	0.9816
UHGV-1769805	No	15,738 bps	48.10%	38.68%	0.9809
UHGV-1661217	No	14,099 bps	49.07%	34.60%	0.9820
UHGV-1933390	No	14,000 bps	48.19%	34.02%	0.9816
UHGV-1999714	No	13,794 bps	46.09%	33.82%	0.9630
UHGV-1684625	No	12,738 bps	49.45%	30.64%	0.9821
UHGV-1945397	No	12,153 bps	48.31%	29.78%	0.9826
UHGV-1595284	No	11,694 bps	49.89%	28.09%	0.9808
UHGV-0405180	No	10,806 bps	49.19%	26.64%	0.9835
UHGV-1713702	No	10,580 bps	49.37%	26.09%	0.9834