vOTU-001240

Overview

No. of genomes 26

Genome length 33,283 bps

Completeness 100.00% (complete)

Host UBA1417 sp003531055

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-001240
Number of genomes	26
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00598 › vGENUS-00499 › vSUBGEN-00642 › vOTU-001240
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › UBA1417 › UBA1417 sp003531055
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1354272
BioSample	SAMN00034856
Genome length	33,283 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	53
CDS density	91.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1354272_1	PHROG	phrog_27197	NA	unknown function
UHGV-1354272_1	eggNOG-mapper	645991.Sgly_0315	regulation of DNA-templated transcription, elongation	NA
UHGV-1354272_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1354272_3	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1354272_3	UniRef90	UniRef90_A0A410PZR1	Siphovirus Gp157 family protein	NA
UHGV-1354272_3	eggNOG-mapper	1296659.S5M9S4_9CAUD	Siphovirus Gp157	NA
UHGV-1354272_3	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1354272_3	Structural annotation	PF05565, NF002139	NA	NA
UHGV-1354272_4	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1354272_4	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-1354272_4	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-1354272_4	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-1354272_5	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1354272_5	UniRef90	UniRef90_A0A2Z4Q9W9	NinB	NA
UHGV-1354272_5	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-1354272_5	Structural annotation	PF05772	NA	NA
UHGV-1354272_6	PHROG	phrog_7566	NA	unknown function
UHGV-1354272_6	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-1354272_6	eggNOG-mapper	1507.HMPREF0262_00433	NA	NA
UHGV-1354272_7	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1354272_7	UniRef90	UniRef90_UPI0011781160	NA	NA
UHGV-1354272_7	eggNOG-mapper	1120998.AUFC01000030_gene2219	NA	NA
UHGV-1354272_7	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1354272_7	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1354272_7	Structural annotation	PF14297	NA	NA
UHGV-1354272_8	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1354272_8	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1354272_8	UniRef90	UniRef90_A0A1C6HFV4	DNA replication protein	NA
UHGV-1354272_8	eggNOG-mapper	428125.CLOLEP_01820	NA	NA
UHGV-1354272_8	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1354272_8	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1354272_8	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-1354272_9	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1354272_9	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1354272_9	UniRef90	UniRef90_A0A352RPR0	Single-stranded DNA-binding protein	NA
UHGV-1354272_9	eggNOG-mapper	1384065.JAGS01000001_gene118	Single-stranded DNA-binding protein	NA
UHGV-1354272_9	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1354272_9	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1354272_9	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1354272_9	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1354272_9	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1354272_10	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1354272_10	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1354272_10	UniRef90	UniRef90_A0A3D0M1J0	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1354272_10	eggNOG-mapper	411459.RUMOBE_01038	COG COG4570 Holliday junction resolvase	NA
UHGV-1354272_10	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1354272_10	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1354272_10	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-1354272_16	UniRef90	UniRef90_A0A3A9EZN6	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-1354272_16	eggNOG-mapper	1111134.HMPREF1253_1193	NA	NA
UHGV-1354272_16	Structural annotation	PF02996	NA	NA
UHGV-1354272_17	PHROG	phrog_21498	NA	unknown function
UHGV-1354272_17	UniRef90	UniRef90_F0NXT0	ParB-like nuclease	NA
UHGV-1354272_17	eggNOG-mapper	78346.BRUM_0376	DNA binding	NA
UHGV-1354272_17	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1354272_17	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-1354272_19	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1354272_19	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1354272_19	UniRef90	UniRef90_A0A2V2GQ57	HNH endonuclease	NA
UHGV-1354272_19	eggNOG-mapper	1226322.HMPREF1545_00111	HNH nucleases	NA
UHGV-1354272_19	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1354272_19	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1354272_19	Structural annotation	PF05766, NF008448	NA	NA
UHGV-1354272_20	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-1354272_20	UniRef90	UniRef90_A0A1C6H6I9	Phage terminase, small subunit	NA
UHGV-1354272_20	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1354272_20	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1354272_20	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1354272_21	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1354272_21	UniRef90	UniRef90_A0A0D8IV16	Terminase	NA
UHGV-1354272_21	eggNOG-mapper	1226322.HMPREF1545_00113	Phage Terminase	NA
UHGV-1354272_21	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1354272_21	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1354272_21	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1354272_21	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-1354272_22	PHROG	phrog_12	portal protein	head and packaging
UHGV-1354272_22	UniRef90	UniRef90_A0A0D8IVL0	Phage portal protein	NA
UHGV-1354272_22	eggNOG-mapper	1226322.HMPREF1545_00114	Phage portal protein, HK97 family	NA
UHGV-1354272_22	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1354272_22	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1354272_22	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1354272_22	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1354272_23	KOfam	K06904	NA	NA
UHGV-1354272_23	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1354272_23	UniRef90	UniRef90_A0A1C6H687	Phage prohead protease, HK97 family	NA
UHGV-1354272_23	eggNOG-mapper	1226322.HMPREF1545_00115	Phage prohead protease, HK97 family	NA
UHGV-1354272_23	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1354272_23	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1354272_23	COG	COG3740	Phage head maturation protease	NA
UHGV-1354272_23	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1354272_24	PHROG	phrog_10	major head protein	head and packaging
UHGV-1354272_24	UniRef90	UniRef90_UPI000679B959	phage major capsid protein	NA
UHGV-1354272_24	eggNOG-mapper	1226322.HMPREF1545_00116	phage major capsid protein, HK97 family	NA
UHGV-1354272_24	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1354272_24	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1354272_24	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1354272_24	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1354272_25	PHROG	phrog_2550	NA	unknown function
UHGV-1354272_25	UniRef90	UniRef90_UPI001E35E63D	phage head-tail connector protein	NA
UHGV-1354272_25	eggNOG-mapper	1226322.HMPREF1545_00117	NA	NA
UHGV-1354272_25	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1354272_26	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-1354272_26	UniRef90	UniRef90_UPI0013024D32	phage head closure protein	NA
UHGV-1354272_26	eggNOG-mapper	411471.SUBVAR_05854	NA	NA
UHGV-1354272_26	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1354272_26	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1354272_27	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1354272_27	UniRef90	UniRef90_A0A8J6PH82	HK97 gp10 family phage protein	NA
UHGV-1354272_27	eggNOG-mapper	411471.SUBVAR_05855	NA	NA
UHGV-1354272_27	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1354272_27	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1354272_28	PHROG	phrog_78	tail terminator	connector
UHGV-1354272_28	UniRef90	UniRef90_U2SBX3	HTH merR-type domain-containing protein	NA
UHGV-1354272_28	eggNOG-mapper	411471.SUBVAR_05856	NA	NA
UHGV-1354272_28	Structural annotation	PF20765	NA	NA
UHGV-1354272_29	PHROG	phrog_88	major tail protein	tail
UHGV-1354272_29	UniRef90	UniRef90_D1PND6	Phage major tail protein, phi13 family	NA
UHGV-1354272_29	eggNOG-mapper	411471.SUBVAR_05857	phage major tail protein, phi13 family	NA
UHGV-1354272_29	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1354272_29	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1354272_30	PHROG	phrog_709	NA	unknown function
UHGV-1354272_30	eggNOG-mapper	411471.SUBVAR_05858	NA	NA
UHGV-1354272_30	Structural annotation	PF11836	NA	NA
UHGV-1354272_31	PHROG	phrog_3033	NA	unknown function
UHGV-1354272_31	eggNOG-mapper	1304866.K413DRAFT_1233	NA	NA
UHGV-1354272_32	PHROG	phrog_5755	tail length tape measure protein	tail
UHGV-1354272_32	UniRef90	UniRef90_A0A1C6H5M9	Phage-related minor tail protein	NA
UHGV-1354272_32	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-1354272_32	COG	COG5412	Phage-related protein	NA
UHGV-1354272_32	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1354272_33	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1354272_33	UniRef90	UniRef90_A0A1C6H6D2	Phage-related protein	NA
UHGV-1354272_33	eggNOG-mapper	1123263.AUKY01000068_gene490	tail component	NA
UHGV-1354272_33	COG	COG4722	Phage-related protein YomH	NA
UHGV-1354272_33	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1354272_34	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1354272_34	UniRef90	UniRef90_UPI001968120D	phage tail protein	NA
UHGV-1354272_34	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-1354272_34	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1354272_34	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1354272_34	COG	COG4926	Phage-related protein	NA
UHGV-1354272_34	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1354272_35	eggNOG-mapper	1321782.HMPREF1986_02279	COG NOG18825 non supervised orthologous group	NA
UHGV-1354272_35	Pfam	PF19789	NA	DUF6273
UHGV-1354272_35	Structural annotation	PF10651, PF19789, COG2372	NA	NA
UHGV-1354272_36	PHROG	phrog_1863	NA	unknown function
UHGV-1354272_36	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-1354272_37	PHROG	phrog_443	holin	lysis
UHGV-1354272_37	UniRef90	UniRef90_UPI001C3BFF52	Holin	NA
UHGV-1354272_37	eggNOG-mapper	1469948.JPNB01000002_gene3855	Putative lactococcus lactis phage r1t holin	NA
UHGV-1354272_37	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1354272_37	Structural annotation	PF16945	NA	NA
UHGV-1354272_38	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-1354272_38	PHROG	phrog_819	tail protein	tail
UHGV-1354272_38	UniRef90	UniRef90_UPI0018835F0C	collagen-like protein	NA
UHGV-1354272_38	eggNOG-mapper	476272.RUMHYD_00002	NA	NA
UHGV-1354272_38	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1354272_38	Structural annotation	PF10651	NA	NA
UHGV-1354272_39	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1354272_39	PHROG	phrog_3088	amidase	lysis
UHGV-1354272_39	UniRef90	UniRef90_A0A3D3Y0W1	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-1354272_39	eggNOG-mapper	428125.CLOLEP_01782	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1354272_39	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1354272_39	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1354272_39	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1354272_40	UniRef90	UniRef90_R6DRH1	Putative TnpX site-specific recombinase	NA
UHGV-1354272_40	eggNOG-mapper	742738.HMPREF9460_00886	NA	NA
UHGV-1354272_41	eggNOG-mapper	469378.Ccur_02570	NA	NA
UHGV-1354272_44	KOfam	K14059	int; integrase	NA
UHGV-1354272_44	PHROG	phrog_1	integrase	integration and excision
UHGV-1354272_44	UniRef90	UniRef90_UPI00164B8B01	site-specific integrase	NA
UHGV-1354272_44	eggNOG-mapper	861454.HMPREF9099_00328	Phage integrase family	NA
UHGV-1354272_44	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1354272_44	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1354272_44	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-1354272_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1354272_45	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-1354272_46	PHROG	phrog_17572	NA	unknown function
UHGV-1354272_46	UniRef90	UniRef90_A0A0H4LIJ8	Prophage ps2 protein 03	NA
UHGV-1354272_46	eggNOG-mapper	1499683.CCFF01000017_gene3026	NA	NA
UHGV-1354272_46	AcrCatalog	cluster_25152	NA	NA
UHGV-1354272_46	Structural annotation	PF13783, MF_01122	NA	NA
UHGV-1354272_48	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1354272_48	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1354272_48	UniRef90	UniRef90_A0A1Q6RKG1	HTH cro/C1-type domain-containing protein	NA
UHGV-1354272_48	eggNOG-mapper	97138.C820_01960	Helix-turn-helix XRE-family like proteins	NA
UHGV-1354272_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1354272_48	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1354272_48	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-1354272_51	Structural annotation	PF13560, MF_00535, NF041951, COG3655	NA	NA
UHGV-1354272_53	PHROG	phrog_4433	NA	unknown function
UHGV-1354272_53	UniRef90	UniRef90_A0A6M5C839	Putative ADP-ribosyltransferase	NA
UHGV-1354272_53	eggNOG-mapper	106648.BBLJ01000054_gene3814	regulation of DNA-templated transcription, elongation	NA
UHGV-1354272_53	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1354272	Yes	33,283 bps	52.59%	100.00%	0.9789
UHGV-1360306	No	32,989 bps	52.50%	100.00%	0.9804
UHGV-1360528	No	32,977 bps	52.51%	100.00%	0.9785
UHGV-2149151	No	32,850 bps	52.28%	100.00%	0.9782
UHGV-1363423	No	31,790 bps	52.61%	100.00%	0.9799
UHGV-0091471	No	35,076 bps	51.76%	99.90%	0.9780
UHGV-1927874	No	32,929 bps	52.89%	99.90%	0.9718
UHGV-1545202	No	32,289 bps	52.46%	99.90%	0.9810
UHGV-0212885	No	31,200 bps	53.37%	96.71%	0.9771
UHGV-0843089	No	31,013 bps	53.12%	96.15%	0.9808
UHGV-1403990	No	27,121 bps	53.59%	84.04%	0.9799
UHGV-0996638	No	24,869 bps	52.70%	77.08%	0.9797
UHGV-1450070	No	24,565 bps	53.22%	76.19%	0.9800
UHGV-1419604	No	24,111 bps	54.67%	74.76%	0.9825
UHGV-1956181	No	24,017 bps	51.01%	74.42%	0.9775
UHGV-2217201	No	22,414 bps	55.02%	69.49%	0.9823
UHGV-2199380	No	20,738 bps	54.34%	64.31%	0.9802
UHGV-0233345	No	20,225 bps	54.65%	62.72%	0.9820
UHGV-1440346	No	20,069 bps	52.19%	62.18%	0.9785
UHGV-1394878	No	19,301 bps	50.09%	59.77%	0.9766
UHGV-2186685	No	18,335 bps	55.46%	56.87%	0.9829
UHGV-1810773	No	13,684 bps	55.95%	42.10%	0.9828
UHGV-0873863	No	11,732 bps	49.10%	36.37%	0.9755
UHGV-1622453	No	11,582 bps	56.20%	35.65%	0.9820
UHGV-2204930	No	10,406 bps	49.91%	32.17%	0.9760
UHGV-2199376	No	10,316 bps	50.71%	31.87%	0.9794