vOTU-001710

Overview

No. of genomes 47

Genome length 18,466 bps

Completeness 100.00% (complete)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-001710
Number of genomes	47
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-02153 › vGENUS-04060 › vSUBGEN-02241 › vOTU-001710
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1479842
BioSample	SAMEA2466942
Genome length	18,466 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	24
CDS density	91.78%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1479842_1	PHROG	phrog_2150	terminase	head and packaging
UHGV-1479842_1	UniRef90	UniRef90_A0A843GVF4	Phage DNA encapsidation protein	NA
UHGV-1479842_1	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1479842_1	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1479842_1	Structural annotation	PF05894, MF_04145, TIGR01547, COG5323	NA	NA
UHGV-1479842_2	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1479842_2	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-1479842_2	UniRef90	UniRef90_F4XEQ8	HTH cro/C1-type domain-containing protein	NA
UHGV-1479842_2	eggNOG-mapper	1519439.JPJG01000059_gene1955	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1479842_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1479842_2	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1479842_3	Structural annotation	PF17548	NA	NA
UHGV-1479842_4	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1479842_4	UniRef90	UniRef90_J9GJ47	SsDNA binding protein (Fragment)	NA
UHGV-1479842_4	eggNOG-mapper	307240.Q5ILD0_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-1479842_4	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-1479842_4	Structural annotation	PF17427	NA	NA
UHGV-1479842_5	Structural annotation	PF05435	NA	NA
UHGV-1479842_6	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1479842_6	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1479842_6	UniRef90	UniRef90_A0A355RJ67	DNA-directed DNA polymerase	NA
UHGV-1479842_6	eggNOG-mapper	10756.DPOL_BPPH2	DNA polymerase type B, organellar and viral	NA
UHGV-1479842_6	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1479842_6	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1479842_7	PHROG	phrog_4898	holin	lysis
UHGV-1479842_8	KOfam	K07273	acm; lysozyme	NA
UHGV-1479842_8	PHROG	phrog_291	endolysin	lysis
UHGV-1479842_8	UniRef90	UniRef90_E6MGW6	Glycosyl hydrolase family 25	NA
UHGV-1479842_8	eggNOG-mapper	887929.HMP0721_1250	hydrolase, family 25	NA
UHGV-1479842_8	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1479842_8	Pfam	PF00395	S-layer homology domain	SLH
UHGV-1479842_8	COG	COG1388	LysM repeat	NA
UHGV-1479842_8	Structural annotation	PF01183, COG3757	NA	NA
UHGV-1479842_9	KOfam	K07273	acm; lysozyme	NA
UHGV-1479842_9	PHROG	phrog_291	endolysin	lysis
UHGV-1479842_9	UniRef90	UniRef90_A0A843GNG3	CHAP domain-containing protein	NA
UHGV-1479842_9	eggNOG-mapper	1235796.C815_01287	pathogenesis	NA
UHGV-1479842_9	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1479842_9	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1479842_9	Pfam	PF05257	CHAP domain	CHAP
UHGV-1479842_9	COG	COG3942	Surface antigen	NA
UHGV-1479842_11	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1479842_11	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1479842_11	eggNOG-mapper	1309583.M4W8D1_9CAUD	viral capsid	NA
UHGV-1479842_11	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1479842_12	PHROG	phrog_2248	tail protein	tail
UHGV-1479842_12	UniRef90	UniRef90_A0A843HU95	Caud_tail_N domain-containing protein	NA
UHGV-1479842_12	eggNOG-mapper	1128071.G9J3I0_9CAUD	NA	NA
UHGV-1479842_12	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1479842_12	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1479842_12	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1479842_13	PHROG	phrog_2038	upper collar connector	connector
UHGV-1479842_13	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1479842_13	eggNOG-mapper	1309583.M4W5Z5_9CAUD	Phage Connector (GP10)	NA
UHGV-1479842_13	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1479842_13	Structural annotation	PF05352, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-1479842_14	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1479842_14	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-1479842_17	PHROG	phrog_5231	NA	unknown function
UHGV-1479842_17	Structural annotation	PF14600	NA	NA
UHGV-1479842_18	Structural annotation	PF18957, PF14600	NA	NA
UHGV-1479842_23	Structural annotation	PF19962	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1479842	Yes	18,466 bps	40.69%	100.00%	0.9788
UHGV-1475943	No	18,348 bps	41.21%	100.00%	0.9794
UHGV-1399484	No	18,220 bps	40.81%	100.00%	0.9780
UHGV-1399497	No	18,121 bps	40.87%	100.00%	0.9782
UHGV-1434978	No	17,620 bps	40.49%	100.00%	0.9783
UHGV-1439712	No	17,618 bps	40.48%	100.00%	0.9780
UHGV-0359920	No	18,477 bps	40.83%	84.15%	0.9785
UHGV-1479610	No	18,422 bps	40.46%	83.85%	0.9788
UHGV-0227043	No	18,415 bps	40.55%	83.82%	0.9787
UHGV-0177173	No	18,380 bps	40.78%	82.53%	0.9784
UHGV-1394283	No	18,208 bps	40.81%	81.74%	0.9779
UHGV-1393624	No	18,143 bps	40.83%	81.44%	0.9768
UHGV-1397287	No	18,137 bps	40.87%	81.39%	0.9786
UHGV-1396383	No	18,024 bps	40.86%	80.79%	0.9785
UHGV-1438528	No	17,739 bps	40.43%	80.78%	0.9783
UHGV-1392616	No	18,109 bps	41.34%	80.68%	0.9787
UHGV-0389363	No	17,949 bps	40.68%	80.57%	0.9783
UHGV-1946581	No	17,687 bps	40.45%	80.55%	0.9780
UHGV-0334811	No	17,353 bps	40.46%	79.94%	0.9784
UHGV-2234388	No	17,532 bps	40.46%	79.84%	0.9779
UHGV-1479279	No	17,451 bps	40.55%	79.48%	0.9769
UHGV-1477204	No	17,391 bps	40.37%	79.24%	0.9784
UHGV-1481721	No	17,322 bps	40.34%	78.89%	0.9785
UHGV-1436638	No	17,570 bps	40.67%	78.86%	0.9776
UHGV-1922383	No	17,315 bps	40.34%	78.86%	0.9786
UHGV-2220175	No	17,303 bps	40.51%	78.81%	0.9781
UHGV-1923219	No	17,270 bps	40.48%	78.66%	0.9777
UHGV-1442373	No	17,530 bps	40.28%	78.38%	0.9786
UHGV-1423510	No	17,041 bps	40.29%	77.88%	0.9777
UHGV-1396352	No	16,903 bps	39.77%	77.01%	0.9773
UHGV-0206337	No	16,796 bps	40.52%	76.48%	0.9780
UHGV-1393021	No	17,000 bps	39.35%	76.19%	0.9775
UHGV-2196416	No	16,165 bps	39.83%	73.53%	0.9777
UHGV-1416925	No	16,108 bps	40.92%	73.09%	0.9780
UHGV-0440346	No	15,705 bps	41.05%	71.52%	0.9797
UHGV-1415593	No	15,493 bps	39.98%	70.30%	0.9774
UHGV-0071202	No	15,295 bps	40.05%	69.66%	0.9769
UHGV-1495115	No	13,762 bps	41.00%	61.79%	0.9792
UHGV-1407551	No	13,374 bps	40.44%	59.74%	0.9791
UHGV-2218727	No	12,498 bps	40.70%	56.87%	0.9808
UHGV-0445150	No	12,411 bps	40.96%	56.51%	0.9797
UHGV-1405721	No	11,633 bps	41.20%	51.73%	0.9792
UHGV-1901186	No	11,077 bps	40.50%	50.43%	0.9795
UHGV-1864181	No	11,171 bps	41.08%	49.52%	0.9796
UHGV-1686855	No	10,850 bps	41.00%	48.08%	0.9784
UHGV-1799458	No	12,929 bps	41.74%	39.67%	0.9785
UHGV-1691903	No	10,776 bps	41.52%	35.06%	0.9777