vOTU-002264

Overview

vOTU representative UHGV-2036608

No. of genomes 4

Genome length 36,654 bps

Completeness 100.00% (complete)

Host SFEL01 sp004557245

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-002264
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00087 › vSUBFAM-00289 › vGENUS-00434 › vSUBGEN-40279 › vOTU-002264
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › CAG-138 › SFEL01 › SFEL01 sp004557245
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2036608
BioSample	SAMEA2737743
Genome length	36,654 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	61
CDS density	89.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2036608_2	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2036608_2	UniRef90	UniRef90_UPI00082FB90B	HNH endonuclease	NA
UHGV-2036608_2	eggNOG-mapper	445972.ANACOL_01826	HNH nucleases	NA
UHGV-2036608_2	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2036608_4	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2036608_5	PHROG	phrog_24368	NA	unknown function
UHGV-2036608_6	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2036608_6	UniRef90	UniRef90_UPI000BFEB725	conserved phage C-terminal domain-containing protein	NA
UHGV-2036608_6	eggNOG-mapper	642492.Clole_1831	Helix-turn-helix domain	NA
UHGV-2036608_6	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-2036608_6	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-2036608_6	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-2036608_6	Structural annotation	PF09524, TIGR02220	NA	NA
UHGV-2036608_7	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-2036608_7	PHROG	phrog_116	DNA methyltransferase	other
UHGV-2036608_7	UniRef90	UniRef90_A0A316NA61	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2036608_7	eggNOG-mapper	718252.FP2_16350	C-5 cytosine-specific DNA methylase	NA
UHGV-2036608_7	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-2036608_7	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-2036608_7	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2036608_7	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2036608_9	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2036608_9	eggNOG-mapper	537013.CLOSTMETH_02141	NA	NA
UHGV-2036608_9	Structural annotation	PF21578, MF_00360	NA	NA
UHGV-2036608_10	PHROG	phrog_824	NA	unknown function
UHGV-2036608_10	UniRef90	UniRef90_UPI001C0C5C8A	VRR-NUC domain-containing protein	NA
UHGV-2036608_10	eggNOG-mapper	411470.RUMGNA_02049	VRR-NUC domain	NA
UHGV-2036608_10	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2036608_11	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-2036608_12	PHROG	phrog_17928	NA	unknown function
UHGV-2036608_12	eggNOG-mapper	338963.Pcar_0531	NA	NA
UHGV-2036608_16	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-2036608_16	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-2036608_16	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-2036608_16	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-2036608_17	PHROG	phrog_22543	NA	unknown function
UHGV-2036608_20	Pfam	PF20037	NA	DUF6440
UHGV-2036608_20	Structural annotation	PF20037	NA	NA
UHGV-2036608_21	PHROG	phrog_3301	pyrophosphatase	other
UHGV-2036608_21	eggNOG-mapper	411459.RUMOBE_01042	Mazg nucleotide pyrophosphohydrolase	NA
UHGV-2036608_21	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-2036608_21	Structural annotation	COG1694	NA	NA
UHGV-2036608_22	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-2036608_24	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2036608_24	UniRef90	UniRef90_A0A1M5WHB2	5-methylcytosine-specific restriction enzyme A	NA
UHGV-2036608_24	eggNOG-mapper	371042.NG99_21295	HNH nucleases	NA
UHGV-2036608_24	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2036608_25	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-2036608_25	UniRef90	UniRef90_UPI0003615350	phage terminase small subunit P27 family	NA
UHGV-2036608_25	eggNOG-mapper	439292.Bsel_0787	Phage terminase small Subunit	NA
UHGV-2036608_25	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2036608_25	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-2036608_25	COG	COG3747	Phage terminase, small subunit	NA
UHGV-2036608_25	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2036608_26	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2036608_26	UniRef90	UniRef90_UPI00164ABF0B	terminase large subunit	NA
UHGV-2036608_26	eggNOG-mapper	1122919.KB905559_gene1359	Terminase	NA
UHGV-2036608_26	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2036608_26	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2036608_26	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2036608_26	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2036608_27	PHROG	phrog_12	portal protein	head and packaging
UHGV-2036608_27	UniRef90	UniRef90_A0A1V5WBB3	Phage portal protein	NA
UHGV-2036608_27	eggNOG-mapper	1410624.JNKK01000017_gene1975	Phage portal protein	NA
UHGV-2036608_27	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2036608_27	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2036608_27	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2036608_27	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2036608_28	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2036608_28	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2036608_28	UniRef90	UniRef90_A0A1V5WAY6	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2036608_28	eggNOG-mapper	748727.CLJU_c03550	Belongs to the peptidase S14 family	NA
UHGV-2036608_28	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2036608_28	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2036608_28	Structural annotation	PF00574, MF_00444, NF009203, COG0740	NA	NA
UHGV-2036608_29	PHROG	phrog_10	major head protein	head and packaging
UHGV-2036608_29	UniRef90	UniRef90_UPI00164C0871	phage major capsid protein	NA
UHGV-2036608_29	eggNOG-mapper	1121324.CLIT_8c00760	phage major capsid protein, HK97 family	NA
UHGV-2036608_29	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2036608_29	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2036608_29	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2036608_29	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2036608_30	PHROG	phrog_442	head-tail adaptor	connector
UHGV-2036608_30	UniRef90	UniRef90_UPI00164A2E93	head-tail connector protein	NA
UHGV-2036608_30	eggNOG-mapper	1449126.JQKL01000051_gene3168	Phage gp6-like head-tail connector protein	NA
UHGV-2036608_30	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2036608_30	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2036608_30	Structural annotation	PF05135, TIGR02215	NA	NA
UHGV-2036608_31	PHROG	phrog_25	head closure Hc1	connector
UHGV-2036608_31	UniRef90	UniRef90_UPI00164B7AD3	phage head closure protein	NA
UHGV-2036608_31	eggNOG-mapper	935948.KE386495_gene1331	Phage head-tail joining protein	NA
UHGV-2036608_31	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2036608_31	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2036608_31	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2036608_31	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2036608_32	PHROG	phrog_78	tail terminator	connector
UHGV-2036608_32	eggNOG-mapper	1444310.JANV01000004_gene2676	NA	NA
UHGV-2036608_32	Structural annotation	PF05657	NA	NA
UHGV-2036608_33	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2036608_33	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2036608_33	Structural annotation	TIGR01725	NA	NA
UHGV-2036608_34	PHROG	phrog_88	major tail protein	tail
UHGV-2036608_34	UniRef90	UniRef90_S0FUN2	Phage major tail protein, phi13 family	NA
UHGV-2036608_34	eggNOG-mapper	1195236.CTER_5106	phage major tail protein, phi13 family	NA
UHGV-2036608_34	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2036608_34	COG	COG5492	NA	NA
UHGV-2036608_34	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-2036608_35	Structural annotation	PF11836	NA	NA
UHGV-2036608_36	PHROG	phrog_13338	NA	unknown function
UHGV-2036608_36	UniRef90	UniRef90_A3DFW3	Tail tape measure protein TP901 core region	NA
UHGV-2036608_36	eggNOG-mapper	1195236.CTER_5104	nuclear chromosome segregation	NA
UHGV-2036608_36	COG	COG5283	Phage-related tail protein	NA
UHGV-2036608_36	Structural annotation	PF20155	NA	NA
UHGV-2036608_37	PHROG	phrog_37549	virion structural protein	head and packaging
UHGV-2036608_37	UniRef90	UniRef90_A0A3D0W045	Fibronectin type-III domain-containing protein	NA
UHGV-2036608_37	eggNOG-mapper	642492.Clole_0981	NA	NA
UHGV-2036608_37	Pfam	PF19789	NA	DUF6273
UHGV-2036608_37	Structural annotation	PF19077, PF06199, PF16794, PF08329, MF_04116, NF040520, COG3401, COG3499	NA	NA
UHGV-2036608_38	PHROG	phrog_26795	NA	unknown function
UHGV-2036608_38	UniRef90	UniRef90_A0A5J6T4K8	Minor tail protein	NA
UHGV-2036608_38	eggNOG-mapper	1195236.CTER_5102	NA	NA
UHGV-2036608_38	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-2036608_39	Structural annotation	PF18614, MF_00085, NF003082, COG0361	NA	NA
UHGV-2036608_40	KOfam	K19719	COL2A; collagen type II alpha	NA
UHGV-2036608_40	PHROG	phrog_819	tail protein	tail
UHGV-2036608_40	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-2036608_40	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2036608_40	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-2036608_44	NCBIFam	TIGR01167.1	LPXTG cell wall anchor domain-containing protein	NA
UHGV-2036608_44	Structural annotation	PF12988	NA	NA
UHGV-2036608_45	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-2036608_45	PHROG	phrog_329	minor tail protein	tail
UHGV-2036608_45	UniRef90	UniRef90_A0A2V2EEK9	NlpC/P60 domain-containing protein	NA
UHGV-2036608_45	eggNOG-mapper	1869.MB27_29350	NlpC/P60 family	NA
UHGV-2036608_45	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-2036608_45	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-2036608_45	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2036608_45	Structural annotation	PF00877, PF01471, NF033743, COG0791	NA	NA
UHGV-2036608_46	PHROG	phrog_1863	NA	unknown function
UHGV-2036608_46	UniRef90	UniRef90_A0A7X2Z1D1	t-SNARE coiled-coil homology domain-containing protein	NA
UHGV-2036608_46	eggNOG-mapper	1122918.KB907250_gene3599	NA	NA
UHGV-2036608_47	PHROG	phrog_881	holin	lysis
UHGV-2036608_47	UniRef90	UniRef90_A0A4Q7P349	Dp-1 family holin	NA
UHGV-2036608_47	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-2036608_47	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-2036608_47	Structural annotation	PF16938	NA	NA
UHGV-2036608_49	PHROG	phrog_21718	NA	unknown function
UHGV-2036608_51	eggNOG-mapper	658655.HMPREF0988_00917	NA	NA
UHGV-2036608_52	eggNOG-mapper	658655.HMPREF0988_00916	NA	NA
UHGV-2036608_54	KOfam	K14059	int; integrase	NA
UHGV-2036608_54	PHROG	phrog_1	integrase	integration and excision
UHGV-2036608_54	UniRef90	UniRef90_R6M673	Putative integrase-phage associated	NA
UHGV-2036608_54	eggNOG-mapper	1235797.C816_00779	Phage integrase family	NA
UHGV-2036608_54	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-2036608_54	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2036608_54	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2036608_54	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-2036608_55	KOfam	K19370	DNAJC22; DnaJ homolog subfamily C member 22	NA
UHGV-2036608_55	PHROG	phrog_10292	NA	unknown function
UHGV-2036608_55	UniRef90	UniRef90_UPI001C8BC2B7	TM2 domain-containing protein	NA
UHGV-2036608_55	eggNOG-mapper	1033810.HLPCO_001631	TM2 domain	NA
UHGV-2036608_55	Pfam	PF05154	TM2 domain	TM2
UHGV-2036608_55	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-2036608_55	COG	COG2314	NA	NA
UHGV-2036608_56	eggNOG-mapper	663278.Ethha_2212	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2036608_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2036608_56	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2036608_57	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-2036608_57	PHROG	phrog_5823	transcriptional regulator	transcription regulation
UHGV-2036608_57	UniRef90	UniRef90_A0A7I8D7I7	HTH cro/C1-type domain-containing protein	NA
UHGV-2036608_57	eggNOG-mapper	663278.Ethha_2212	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2036608_57	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2036608_57	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2036608_57	Structural annotation	PF13443, MF_00535, NF041951, COG3655	NA	NA
UHGV-2036608_58	UniRef90	UniRef90_T2RFW2	Bacterial regulatory, Fis family protein	NA
UHGV-2036608_58	eggNOG-mapper	929506.CbC4_1187	NA	NA
UHGV-2036608_58	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-2036608_60	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2036608	Yes	36,654 bps	53.02%	100.00%	0.9785
UHGV-0069293	No	36,654 bps	53.02%	100.00%	0.9803
UHGV-1372273	No	36,654 bps	53.02%	100.00%	0.9804
UHGV-1375326	No	36,654 bps	53.02%	100.00%	0.9803