vOTU-002468

Overview

vOTU representative UHGV-1372006

No. of genomes 5

Genome length 37,268 bps

Completeness 100.00% (complete)

Host Eubacterium I ramulus A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-002468
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-01177 › vGENUS-03635 › vSUBGEN-22690 › vOTU-002468
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Eubacterium I › Eubacterium I ramulus A
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1372006
BioSample	SAMN00042371
Genome length	37,268 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	55
CDS density	92.60%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1372006_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1372006_1	PHROG	phrog_95	integrase	integration and excision
UHGV-1372006_1	UniRef90	UniRef90_U2RFE5	Resolvase protein	NA
UHGV-1372006_1	eggNOG-mapper	1256908.HMPREF0373_00206	Resolvase, N terminal domain	NA
UHGV-1372006_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1372006_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-1372006_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1372006_1	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-1372006_2	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1372006_2	PHROG	phrog_435	endolysin	lysis
UHGV-1372006_2	UniRef90	UniRef90_U2RBW1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1372006_2	eggNOG-mapper	1256908.HMPREF0373_00462	Cell wall hydrolase autolysin	NA
UHGV-1372006_2	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1372006_2	Pfam	PF21540	Choline-binding repeat	Choline_bind_4
UHGV-1372006_2	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1372006_2	Structural annotation	PF01520, PF19127, MF_00417, TIGR02883, TIGR04035, COG0860	NA	NA
UHGV-1372006_3	PHROG	phrog_199	holin	lysis
UHGV-1372006_3	UniRef90	UniRef90_A0A174GVG0	Phage-related holin (Lysis protein)	NA
UHGV-1372006_3	eggNOG-mapper	411462.DORLON_00766	Bacteriophage holin family	NA
UHGV-1372006_3	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1372006_3	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1372006_3	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1372006_3	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1372006_5	eggNOG-mapper	478749.BRYFOR_08510	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-1372006_5	COG	COG4926	Phage-related protein	NA
UHGV-1372006_6	PHROG	phrog_38044	NA	unknown function
UHGV-1372006_6	UniRef90	UniRef90_A0A2V1JQ53	Ig-like domain-containing protein	NA
UHGV-1372006_6	eggNOG-mapper	1437603.BMON_1128	NA	NA
UHGV-1372006_6	Structural annotation	PF14874, NF038186	NA	NA
UHGV-1372006_7	PHROG	phrog_16267	NA	unknown function
UHGV-1372006_7	eggNOG-mapper	877414.ATWA01000019_gene2050	Phage minor structural protein	NA
UHGV-1372006_7	COG	COG4926	Phage-related protein	NA
UHGV-1372006_7	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-1372006_8	PHROG	phrog_1194	NA	unknown function
UHGV-1372006_8	eggNOG-mapper	33035.JPJF01000093_gene2242	NA	NA
UHGV-1372006_8	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1372006_9	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1372006_9	UniRef90	UniRef90_A0A174WQ97	Phage-like protein	NA
UHGV-1372006_9	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-1372006_9	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1372006_9	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1372006_10	PHROG	phrog_8355	NA	unknown function
UHGV-1372006_10	UniRef90	UniRef90_UPI001ADD7ADE	Gp15 family bacteriophage protein	NA
UHGV-1372006_10	eggNOG-mapper	742740.HMPREF9474_03513	NA	NA
UHGV-1372006_10	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1372006_11	PHROG	phrog_8300	NA	unknown function
UHGV-1372006_11	eggNOG-mapper	33035.JPJF01000093_gene2245	NA	NA
UHGV-1372006_11	Structural annotation	PF06854	NA	NA
UHGV-1372006_12	PHROG	phrog_820	major tail protein	tail
UHGV-1372006_12	eggNOG-mapper	1282664.H354_06691	NA	NA
UHGV-1372006_12	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1372006_13	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-1372006_13	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-1372006_13	eggNOG-mapper	33035.JPJF01000093_gene2247	NA	NA
UHGV-1372006_13	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1372006_13	Structural annotation	PF12691, COG5003	NA	NA
UHGV-1372006_14	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1372006_14	eggNOG-mapper	483218.BACPEC_01151	NA	NA
UHGV-1372006_15	PHROG	phrog_8710	NA	unknown function
UHGV-1372006_15	eggNOG-mapper	33035.JPJF01000093_gene2249	NA	NA
UHGV-1372006_15	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1372006_16	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1372006_16	eggNOG-mapper	1304866.K413DRAFT_0783	NA	NA
UHGV-1372006_17	PHROG	phrog_422	major head protein	head and packaging
UHGV-1372006_17	UniRef90	UniRef90_UPI001D0613D8	phage capsid protein	NA
UHGV-1372006_17	eggNOG-mapper	445972.ANACOL_01845	NA	NA
UHGV-1372006_17	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1372006_18	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1372006_18	eggNOG-mapper	33035.JPJF01000093_gene2253	NA	NA
UHGV-1372006_20	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-1372006_20	UniRef90	UniRef90_A0A3E2TS79	NA	NA
UHGV-1372006_20	eggNOG-mapper	1256908.HMPREF0373_00479	NA	NA
UHGV-1372006_20	Pfam	PF14359	NA	DUF4406
UHGV-1372006_20	Structural annotation	PF14359	NA	NA
UHGV-1372006_21	PHROG	phrog_918	NA	unknown function
UHGV-1372006_21	UniRef90	UniRef90_UPI001D092FF5	NA	NA
UHGV-1372006_21	eggNOG-mapper	1256908.HMPREF0373_00480	NA	NA
UHGV-1372006_21	Pfam	PF19791	NA	DUF6275
UHGV-1372006_21	Structural annotation	PF19791	NA	NA
UHGV-1372006_23	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1372006_23	UniRef90	UniRef90_A0A416Q253	Minor capsid protein	NA
UHGV-1372006_23	eggNOG-mapper	33035.JPJF01000093_gene2255	NA	NA
UHGV-1372006_23	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1372006_23	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-1372006_23	COG	COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	NA
UHGV-1372006_23	Structural annotation	PF06152, PF03496, MF_04139, NF040688	NA	NA
UHGV-1372006_24	PHROG	phrog_533	portal protein	head and packaging
UHGV-1372006_24	UniRef90	UniRef90_A0A1C6JYD4	Phage portal protein, putative, A118 family	NA
UHGV-1372006_24	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-1372006_24	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1372006_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1372006_25	PHROG	phrog_10250	NA	unknown function
UHGV-1372006_25	UniRef90	UniRef90_A0A417V8L6	Terminase	NA
UHGV-1372006_25	eggNOG-mapper	1304866.K413DRAFT_0811	Phage terminase, large subunit, PBSX family	NA
UHGV-1372006_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-1372006_25	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1372006_26	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1372006_26	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1372006_26	UniRef90	UniRef90_A0A416L200	Terminase small subunit	NA
UHGV-1372006_26	eggNOG-mapper	1235792.C808_05330	Terminase small subunit	NA
UHGV-1372006_26	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1372006_26	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1372006_26	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1372006_27	Structural annotation	PF11026	NA	NA
UHGV-1372006_28	UniRef90	UniRef90_A0A841KYH0	Ribosome-associated translation inhibitor RaiA	NA
UHGV-1372006_28	eggNOG-mapper	1173020.Cha6605_5303	NA	NA
UHGV-1372006_28	Structural annotation	PF20505, NF001461	NA	NA
UHGV-1372006_29	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1372006_29	UniRef90	UniRef90_A0A3D3U8Q6	Sigma70_r4 domain-containing protein	NA
UHGV-1372006_29	eggNOG-mapper	1256908.HMPREF0373_00671	NA	NA
UHGV-1372006_29	Structural annotation	PF04545, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-1372006_30	PHROG	phrog_20593	NA	unknown function
UHGV-1372006_30	eggNOG-mapper	483218.BACPEC_01161	NA	NA
UHGV-1372006_31	UniRef90	UniRef90_R5TJQ4	Carbamoyl-phosphate synthase L chain ATP-binding protein	NA
UHGV-1372006_32	Structural annotation	PF21715, COG4901	NA	NA
UHGV-1372006_33	UniRef90	UniRef90_U2RIQ6	NA	NA
UHGV-1372006_33	eggNOG-mapper	1256908.HMPREF0373_00667	NA	NA
UHGV-1372006_33	Pfam	PF04448	NA	DUF551
UHGV-1372006_33	Structural annotation	PF04448	NA	NA
UHGV-1372006_35	Structural annotation	PF05641	NA	NA
UHGV-1372006_37	PHROG	phrog_23374	NA	unknown function
UHGV-1372006_37	eggNOG-mapper	1256908.HMPREF0373_00664	NA	NA
UHGV-1372006_38	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-1372006_38	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-1372006_38	UniRef90	UniRef90_U2RAH9	SF4 helicase domain-containing protein	NA
UHGV-1372006_38	eggNOG-mapper	1256908.HMPREF0373_00663	NA	NA
UHGV-1372006_38	Pfam	PF13481	AAA domain	AAA_25
UHGV-1372006_38	COG	COG0305	Replicative DNA helicase	NA
UHGV-1372006_38	Structural annotation	PF03796, PF19898, MF_04154, TIGR03877, TIGR01391, COG0467, COG0358	NA	NA
UHGV-1372006_40	PHROG	phrog_20437	DNA replication initiation	DNA, RNA and nucleotide metabolism
UHGV-1372006_40	UniRef90	UniRef90_U2Q2M3	NA	NA
UHGV-1372006_40	eggNOG-mapper	1256908.HMPREF0373_00661	NA	NA
UHGV-1372006_40	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1372006_40	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1372006_41	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-1372006_41	UniRef90	UniRef90_R9KEE1	ERCC4 domain-containing protein	NA
UHGV-1372006_41	eggNOG-mapper	1256908.HMPREF0373_00660	NA	NA
UHGV-1372006_41	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-1372006_41	Structural annotation	PF03834, NF040956, COG1948	NA	NA
UHGV-1372006_42	PHROG	phrog_18107	NA	unknown function
UHGV-1372006_42	eggNOG-mapper	1256908.HMPREF0373_00659	NA	NA
UHGV-1372006_42	Structural annotation	PF05037	NA	NA
UHGV-1372006_43	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1372006_43	UniRef90	UniRef90_A0A391PHL2	ATP-binding protein	NA
UHGV-1372006_43	eggNOG-mapper	1256908.HMPREF0373_00658	AAA domain	NA
UHGV-1372006_43	Pfam	PF13479	AAA domain	AAA_24
UHGV-1372006_43	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-1372006_44	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1372006_44	UniRef90	UniRef90_UPI001C8D41EE	siphovirus Gp157 family protein	NA
UHGV-1372006_44	eggNOG-mapper	1256908.HMPREF0373_00657	Siphovirus Gp157	NA
UHGV-1372006_44	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1372006_44	Structural annotation	PF05565, NF002139	NA	NA
UHGV-1372006_47	Structural annotation	PF16311, NF002796	NA	NA
UHGV-1372006_50	Structural annotation	PF07378, MF_00783, COG5443	NA	NA
UHGV-1372006_52	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1372006_52	UniRef90	UniRef90_UPI001E32C9FE	helix-turn-helix domain-containing protein	NA
UHGV-1372006_52	eggNOG-mapper	1536772.R70723_06540	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1372006_52	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1372006_52	Structural annotation	PF01381, NF041951, COG3655	NA	NA
UHGV-1372006_53	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1372006_53	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1372006_53	UniRef90	UniRef90_R5G6Y4	DNA-binding helix-turn-helix protein	NA
UHGV-1372006_53	eggNOG-mapper	411459.RUMOBE_00961	Bacteriophage CI repressor helix-turn-helix domain	NA
UHGV-1372006_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1372006_53	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-1372006_53	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-1372006_54	PHROG	phrog_87	metallo-protease	other
UHGV-1372006_54	UniRef90	UniRef90_R6NRS1	Peptidase_M78 domain-containing protein	NA
UHGV-1372006_54	eggNOG-mapper	476272.RUMHYD_01733	IrrE N-terminal-like domain	NA
UHGV-1372006_54	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1372006_54	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1372006_54	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1372006_55	eggNOG-mapper	658086.HMPREF0994_03399	NA	NA
UHGV-1372006_55	Structural annotation	PF07718, PF02883, NF007398, COG3121	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1372006	Yes	37,268 bps	42.06%	100.00%	0.9758
UHGV-0205197	No	37,268 bps	42.06%	100.00%	0.9693
UHGV-0124026	No	37,194 bps	41.99%	100.00%	0.9742
UHGV-0099036	No	37,141 bps	42.00%	99.90%	0.9753
UHGV-2086964	No	16,293 bps	42.89%	44.00%	0.9779