vOTU-002519

Overview

vOTU representative UHGV-2027089

No. of genomes 5

Genome length 40,818 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-002519
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-02427 › vSUBGEN-33773 › vOTU-002519
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2027089
BioSample	SAMEA2579933
Genome length	40,818 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	72
CDS density	90.35%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2027089_6	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2027089_6	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-2027089_6	UniRef90	UniRef90_A0A416S378	PBSX family phage terminase large subunit	NA
UHGV-2027089_6	eggNOG-mapper	411471.SUBVAR_06507	Phage terminase, large subunit, PBSX family	NA
UHGV-2027089_6	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-2027089_6	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-2027089_6	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2027089_6	COG	COG1783	Phage terminase large subunit	NA
UHGV-2027089_6	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-2027089_7	PHROG	phrog_64	portal protein	head and packaging
UHGV-2027089_7	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-2027089_7	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-2027089_7	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2027089_7	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2027089_9	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-2027089_9	UniRef90	UniRef90_A0A844DBI4	Phage_Mu_F domain-containing protein	NA
UHGV-2027089_9	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-2027089_9	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-2027089_9	COG	COG2369	NA	NA
UHGV-2027089_9	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-2027089_11	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2027089_11	UniRef90	UniRef90_A0A844DDB3	HK97 gp10 family phage protein	NA
UHGV-2027089_11	eggNOG-mapper	929506.CbC4_1219	NA	NA
UHGV-2027089_11	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2027089_12	Structural annotation	PF06810	NA	NA
UHGV-2027089_13	PHROG	phrog_544	major head protein	head and packaging
UHGV-2027089_13	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-2027089_13	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-2027089_13	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-2027089_15	PHROG	phrog_17977	NA	unknown function
UHGV-2027089_15	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-2027089_15	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-2027089_16	Structural annotation	PF13554	NA	NA
UHGV-2027089_17	PHROG	phrog_885	major tail protein	tail
UHGV-2027089_17	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-2027089_17	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2027089_20	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-2027089_20	UniRef90	UniRef90_A0A844DDD5	Tape measure protein	NA
UHGV-2027089_20	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-2027089_20	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-2027089_20	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-2027089_20	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2027089_20	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2027089_21	PHROG	phrog_3558	tail protein	tail
UHGV-2027089_21	UniRef90	UniRef90_A0A844DGT5	Prophage_tail domain-containing protein	NA
UHGV-2027089_21	eggNOG-mapper	877414.ATWA01000019_gene2050	Phage minor structural protein	NA
UHGV-2027089_21	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2027089_21	COG	COG4926	Phage-related protein	NA
UHGV-2027089_21	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2027089_23	UniRef90	UniRef90_A0A3R6MTS0	MtfA protein	NA
UHGV-2027089_23	eggNOG-mapper	610130.Closa_0753	phage tail	NA
UHGV-2027089_23	COG	COG4722	Phage-related protein YomH	NA
UHGV-2027089_23	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-2027089_24	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-2027089_24	PHROG	phrog_7158	NA	unknown function
UHGV-2027089_24	UniRef90	UniRef90_A0A1V9QUF5	Metallophos domain-containing protein	NA
UHGV-2027089_24	eggNOG-mapper	565653.EGBG_01980	Phage minor structural protein	NA
UHGV-2027089_24	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-2027089_24	COG	COG1409	3',5'-cyclic AMP phosphodiesterase CpdA	NA
UHGV-2027089_24	Structural annotation	PF14582, MF_00905, NF008359, COG2129	NA	NA
UHGV-2027089_25	KOfam	K07273	acm; lysozyme	NA
UHGV-2027089_25	PHROG	phrog_291	endolysin	lysis
UHGV-2027089_25	UniRef90	UniRef90_UPI001D0EE7D8	glycoside hydrolase family 25 protein	NA
UHGV-2027089_25	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-2027089_25	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2027089_25	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-2027089_25	Structural annotation	PF01183, COG3757	NA	NA
UHGV-2027089_26	PHROG	phrog_1863	NA	unknown function
UHGV-2027089_26	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-2027089_27	PHROG	phrog_15303	NA	unknown function
UHGV-2027089_29	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA
UHGV-2027089_32	PHROG	phrog_13890	NA	unknown function
UHGV-2027089_32	UniRef90	UniRef90_A0A1C7FKE8	Arc domain-containing protein	NA
UHGV-2027089_32	eggNOG-mapper	657322.FPR_28500	NA	NA
UHGV-2027089_32	Structural annotation	NF010256	NA	NA
UHGV-2027089_33	UniRef90	UniRef90_A0A415ZLW7	DNA-binding response regulator	NA
UHGV-2027089_33	eggNOG-mapper	411469.EUBHAL_02513	NA	NA
UHGV-2027089_33	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-2027089_33	Structural annotation	PF00196, NF040595, COG2771	NA	NA
UHGV-2027089_36	PHROG	phrog_3754	NA	unknown function
UHGV-2027089_36	eggNOG-mapper	1485543.JMME01000025_gene2462	NA	NA
UHGV-2027089_37	PHROG	phrog_21718	NA	unknown function
UHGV-2027089_37	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2027089_38	PHROG	phrog_22984	NA	unknown function
UHGV-2027089_39	PHROG	phrog_16490	NA	unknown function
UHGV-2027089_39	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2027089_41	PHROG	phrog_20016	NA	unknown function
UHGV-2027089_41	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-2027089_41	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-2027089_41	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2027089_42	Structural annotation	PF12510	NA	NA
UHGV-2027089_44	KOfam	K14059	int; integrase	NA
UHGV-2027089_44	PHROG	phrog_1	integrase	integration and excision
UHGV-2027089_44	UniRef90	UniRef90_A0A174D176	Tyrosine recombinase XerD	NA
UHGV-2027089_44	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-2027089_44	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2027089_44	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2027089_44	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2027089_45	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-2027089_45	PHROG	phrog_2328	transcriptional repressor	transcription regulation
UHGV-2027089_45	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-2027089_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2027089_45	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2027089_45	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-2027089_48	eggNOG-mapper	1280692.AUJL01000002_gene2596	beta-propeller repeat	NA
UHGV-2027089_48	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-2027089_48	Structural annotation	COG5342	NA	NA
UHGV-2027089_49	PHROG	phrog_888	NA	unknown function
UHGV-2027089_49	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-2027089_49	eggNOG-mapper	1415774.U728_165	Short C-terminal domain	NA
UHGV-2027089_49	Pfam	PF14471	NA	DUF4428
UHGV-2027089_49	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-2027089_49	Structural annotation	PF15947, PF14471	NA	NA
UHGV-2027089_51	Structural annotation	PF09202, MF_01819, NF041230, COG1321	NA	NA
UHGV-2027089_52	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2027089_52	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-2027089_53	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2027089_53	UniRef90	UniRef90_UPI001C009F10	helix-turn-helix transcriptional regulator	NA
UHGV-2027089_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2027089_53	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2027089_53	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2027089_54	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-2027089_54	UniRef90	UniRef90_UPI001C039A6C	ORF6C domain-containing protein	NA
UHGV-2027089_54	eggNOG-mapper	585506.HMPREF0877_0897	ORF6C domain	NA
UHGV-2027089_54	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-2027089_54	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-2027089_54	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-2027089_54	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-2027089_54	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-2027089_56	PHROG	phrog_4433	NA	unknown function
UHGV-2027089_56	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-2027089_56	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-2027089_56	Structural annotation	PF12120, NF007410	NA	NA
UHGV-2027089_58	Structural annotation	PF10743, NF033787	NA	NA
UHGV-2027089_61	Structural annotation	PF14120	NA	NA
UHGV-2027089_63	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2027089_63	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-2027089_63	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-2027089_63	Pfam	PF04404	ERF superfamily	ERF
UHGV-2027089_63	Structural annotation	PF04404, COG4712	NA	NA
UHGV-2027089_64	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2027089_64	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2027089_64	UniRef90	UniRef90_UPI001C00AA91	single-stranded DNA-binding protein	NA
UHGV-2027089_64	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-2027089_64	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2027089_64	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2027089_64	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2027089_64	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2027089_64	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-2027089_65	PHROG	phrog_15768	NA	unknown function
UHGV-2027089_65	UniRef90	UniRef90_E2ZNS6	NA	NA
UHGV-2027089_65	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-2027089_65	Pfam	PF19808	NA	DUF6291
UHGV-2027089_65	Structural annotation	PF19808	NA	NA
UHGV-2027089_66	Structural annotation	PF01775, MF_00273, NF001981, COG2157	NA	NA
UHGV-2027089_68	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2027089_68	UniRef90	UniRef90_UPI000C082058	DNA cytosine methyltransferase	NA
UHGV-2027089_68	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2027089_68	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2027089_69	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-2027089_69	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2027089_69	UniRef90	UniRef90_A0A844DBG8	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-2027089_69	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-2027089_69	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-2027089_69	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-2027089_69	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-2027089_71	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2027089	Yes	40,818 bps	53.34%	100.00%	0.9791
UHGV-1361401	No	40,035 bps	53.45%	100.00%	0.9802
UHGV-0182072	No	40,017 bps	53.46%	100.00%	0.9796
UHGV-1474519	No	40,873 bps	53.36%	99.90%	0.9802
UHGV-0069614	No	40,021 bps	53.46%	99.90%	0.9794