vOTU-002532

Overview

vOTU representative UHGV-0203305

No. of genomes 11

Genome length 29,868 bps

Completeness 100.00% (complete)

Host Collinsella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-002532
Number of genomes	11
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00182 › vSUBFAM-00678 › vGENUS-03537 › vSUBGEN-08536 › vOTU-002532
Host taxonomy	Bacteria › Actinobacteriota › Coriobacteriia › Coriobacteriales › Coriobacteriaceae › Collinsella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203305
BioSample	SAMN10408110
Genome length	29,868 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	50
CDS density	91.33%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203305_1	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0203305_1	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0203305_1	UniRef90	UniRef90_R6WX70	AAA domain-containing protein	NA
UHGV-0203305_1	eggNOG-mapper	203119.Cthe_2467	IstB-like ATP binding protein	NA
UHGV-0203305_1	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0203305_1	NCBIFam	NF005992.0	hypothetical protein	NA
UHGV-0203305_1	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0203305_1	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-0203305_2	UniRef90	UniRef90_UPI00102E56E4	helix-turn-helix domain-containing protein	NA
UHGV-0203305_2	eggNOG-mapper	1139219.I569_00067	DnaD domain protein	NA
UHGV-0203305_2	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0203305_2	Structural annotation	PF13463, TIGR02719, COG3355	NA	NA
UHGV-0203305_4	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0203305_4	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0203305_4	UniRef90	UniRef90_C4F8E6	Single-stranded DNA-binding protein	NA
UHGV-0203305_4	eggNOG-mapper	521003.COLINT_02317	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0203305_4	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0203305_4	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0203305_4	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0203305_4	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0203305_4	Structural annotation	PF00436, MF_00984, NF005406, COG0629	NA	NA
UHGV-0203305_5	PHROG	phrog_14970	NA	unknown function
UHGV-0203305_5	UniRef90	UniRef90_UPI00164BFA28	Rad52/Rad22 family DNA repair protein	NA
UHGV-0203305_5	eggNOG-mapper	697329.Rumal_1121	double-strand break repair protein	NA
UHGV-0203305_5	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0203305_5	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0203305_5	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0203305_9	Structural annotation	PF20714, MF_01909, NF040939, COG4738	NA	NA
UHGV-0203305_11	PHROG	phrog_6969	NA	unknown function
UHGV-0203305_11	eggNOG-mapper	1232446.BAIE02000002_gene816	NA	NA
UHGV-0203305_12	KOfam	K03552	hjr; holliday junction resolvase Hjr [EC:3.1.21.10]	NA
UHGV-0203305_12	eggNOG-mapper	711393.AYRX01000095_gene3600	Archaeal holliday junction resolvase (hjc)	NA
UHGV-0203305_12	Pfam	PF01870	Archaeal holliday junction resolvase (hjc)	Hjc
UHGV-0203305_13	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0203305_13	UniRef90	UniRef90_A0A345MKC2	Minor capsid protein	NA
UHGV-0203305_13	eggNOG-mapper	665956.HMPREF1032_02954	NA	NA
UHGV-0203305_13	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0203305_13	COG	COG2369	NA	NA
UHGV-0203305_13	Structural annotation	PF06152	NA	NA
UHGV-0203305_14	PHROG	phrog_533	portal protein	head and packaging
UHGV-0203305_14	UniRef90	UniRef90_A0A345MKB8	Portal protein	NA
UHGV-0203305_14	eggNOG-mapper	1235799.C818_04218	NA	NA
UHGV-0203305_14	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0203305_15	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0203305_15	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0203305_15	UniRef90	UniRef90_UPI00057FC767	PBSX family phage terminase large subunit	NA
UHGV-0203305_15	eggNOG-mapper	246199.CUS_7600	Phage terminase, large subunit, PBSX family	NA
UHGV-0203305_15	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0203305_15	Pfam	PF14890	Intein splicing domain	Intein_splicing
UHGV-0203305_15	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0203305_15	COG	COG1783	Phage terminase large subunit	NA
UHGV-0203305_15	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, TIGR01445, COG1783	NA	NA
UHGV-0203305_16	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0203305_16	UniRef90	UniRef90_A0A3N0WK81	Terminase	NA
UHGV-0203305_16	eggNOG-mapper	992406.RIA_0201	transposase activity	NA
UHGV-0203305_16	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0203305_16	Structural annotation	PF07141	NA	NA
UHGV-0203305_20	PHROG	phrog_32635	NA	unknown function
UHGV-0203305_20	UniRef90	UniRef90_A0A374TRJ0	Amidase_5 domain-containing protein	NA
UHGV-0203305_20	eggNOG-mapper	97139.C824_05948	NA	NA
UHGV-0203305_20	Structural annotation	PF05382	NA	NA
UHGV-0203305_21	PHROG	phrog_10091	holin	lysis
UHGV-0203305_21	UniRef90	UniRef90_A0A7X2TMW7	Phage holin	NA
UHGV-0203305_21	eggNOG-mapper	445975.COLSTE_02144	Bacteriophage holin	NA
UHGV-0203305_21	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0203305_21	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0203305_21	COG	COG5546	NA	NA
UHGV-0203305_21	Structural annotation	COG5546	NA	NA
UHGV-0203305_24	PHROG	phrog_1220	head protein	head and packaging
UHGV-0203305_24	eggNOG-mapper	1033738.CAEP01000018_gene3685	NA	NA
UHGV-0203305_24	Structural annotation	PF20747	NA	NA
UHGV-0203305_25	PHROG	phrog_538	minor tail protein	tail
UHGV-0203305_25	UniRef90	UniRef90_A0A8J6IQQ3	Siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0203305_25	eggNOG-mapper	1449338.JQLU01000005_gene3628	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-0203305_25	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0203305_25	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0203305_26	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0203305_26	UniRef90	UniRef90_A0A1C5VV34	Phage-related protein	NA
UHGV-0203305_26	eggNOG-mapper	1321782.HMPREF1986_02277	PFAM Phage tail protein	NA
UHGV-0203305_26	COG	COG4722	Phage-related protein YomH	NA
UHGV-0203305_26	Structural annotation	PF16774, PF21766, TIGR01633, COG4722	NA	NA
UHGV-0203305_27	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-0203305_27	UniRef90	UniRef90_A0A318XNK8	Phage-related minor tail protein	NA
UHGV-0203305_27	eggNOG-mapper	445975.COLSTE_02155	Phage tail tape measure protein TP901	NA
UHGV-0203305_27	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0203305_27	Structural annotation	PF20155	NA	NA
UHGV-0203305_28	PHROG	phrog_706	NA	unknown function
UHGV-0203305_28	UniRef90	UniRef90_A0A4U9R6H8	Protein gp15	NA
UHGV-0203305_28	eggNOG-mapper	1540257.JQMW01000013_gene734	Bacteriophage Gp15 protein	NA
UHGV-0203305_28	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0203305_28	Structural annotation	PF06854	NA	NA
UHGV-0203305_30	PHROG	phrog_3099	NA	unknown function
UHGV-0203305_30	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0203305_31	PHROG	phrog_3266	tail completion	connector
UHGV-0203305_31	Structural annotation	PF12691	NA	NA
UHGV-0203305_32	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0203305_32	eggNOG-mapper	764299.STRIC_2533	Minor capsid protein	NA
UHGV-0203305_32	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0203305_32	Structural annotation	PF11114	NA	NA
UHGV-0203305_33	Structural annotation	PF20536	NA	NA
UHGV-0203305_34	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0203305_34	UniRef90	UniRef90_A0A345MKD1	Putative head-tail connector protein	NA
UHGV-0203305_35	PHROG	phrog_892	tail fiber protein	tail
UHGV-0203305_36	PHROG	phrog_267	major head protein	head and packaging
UHGV-0203305_36	UniRef90	UniRef90_A0A7X7VRL6	P22 coat protein - protein 5 domain protein	NA
UHGV-0203305_36	eggNOG-mapper	1504823.CCMM01000008_gene1041	P22 coat protein-protein 5 domain protein	NA
UHGV-0203305_36	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0203305_39	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0203305_39	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0203305_39	UniRef90	UniRef90_UPI000AB7E165	site-specific DNA-methyltransferase	NA
UHGV-0203305_39	eggNOG-mapper	521003.COLINT_02335	DNA methylase	NA
UHGV-0203305_39	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0203305_39	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0203305_39	COG	COG0863	DNA modification methylase	NA
UHGV-0203305_39	Structural annotation	PF12847, TIGR02469	NA	NA
UHGV-0203305_40	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0203305_40	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0203305_40	UniRef90	UniRef90_UPI00096ABC7C	ParB/Srx family N-terminal domain-containing protein	NA
UHGV-0203305_40	eggNOG-mapper	521003.COLINT_02335	DNA methylase	NA
UHGV-0203305_40	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0203305_40	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0203305_40	COG	COG0863	DNA modification methylase	NA
UHGV-0203305_41	PHROG	phrog_28142	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203305_41	eggNOG-mapper	1111121.HMPREF1247_0042	NA	NA
UHGV-0203305_44	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0203305_44	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0203305_44	UniRef90	UniRef90_A0A415UWA3	Methyltransferase	NA
UHGV-0203305_44	eggNOG-mapper	1064535.MELS_1947	N-4 methylation of cytosine	NA
UHGV-0203305_44	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0203305_44	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0203305_44	COG	COG0863	DNA modification methylase	NA
UHGV-0203305_44	Structural annotation	PF01555, NF008572, COG0863	NA	NA
UHGV-0203305_45	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0203305_45	UniRef90	UniRef90_A0A7C6TWW8	Siphovirus Gp157 family protein	NA
UHGV-0203305_45	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-0203305_45	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0203305_45	Structural annotation	PF05565	NA	NA
UHGV-0203305_48	Structural annotation	PF01503, MF_01020, TIGR03188, COG0140	NA	NA
UHGV-0203305_49	PHROG	phrog_1689	nucleotide kinase	other
UHGV-0203305_49	UniRef90	UniRef90_UPI000E3BC5A6	NA	NA
UHGV-0203305_49	Pfam	PF11753	NA	DUF3310

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203305	Yes	29,868 bps	61.27%	100.00%	0.9810
UHGV-0341210	No	29,588 bps	61.06%	100.00%	0.9810
UHGV-1407758	No	26,100 bps	61.55%	100.00%	0.9811
UHGV-2045131	No	28,950 bps	60.50%	98.92%	0.9796
UHGV-1345287	No	26,136 bps	61.51%	89.38%	0.9810
UHGV-0124648	No	26,132 bps	61.54%	89.35%	0.9810
UHGV-1404848	No	26,132 bps	61.54%	89.35%	0.9810
UHGV-1418816	No	22,922 bps	61.73%	77.01%	0.9818
UHGV-1357260	No	11,908 bps	60.05%	40.95%	0.9786
UHGV-0072591	No	10,570 bps	62.37%	35.51%	0.9824
UHGV-1720640	No	10,570 bps	62.37%	35.51%	0.9824