vOTU-003397

Overview

No. of genomes 8

Genome length 35,224 bps

Completeness 100.00% (complete)

Host CAG-448 sp003150135

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-003397
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00264 › vSUBFAM-00917 › vGENUS-00826 › vSUBGEN-00396 › vOTU-003397
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › CAG-272 › CAG-448 › CAG-448 sp003150135
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1362721
BioSample	NA
Genome length	35,224 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	47
CDS density	92.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1362721_1	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-1362721_1	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1362721_1	UniRef90	UniRef90_A0A3A9DTT0	Methyltransferase (Fragment)	NA
UHGV-1362721_1	eggNOG-mapper	1288484.APCS01000031_gene2368	N-4 methylation of cytosine	NA
UHGV-1362721_1	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-1362721_1	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1362721_1	COG	COG0863	DNA modification methylase	NA
UHGV-1362721_2	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1362721_2	UniRef90	UniRef90_A0A2Z4GUI4	Minor capsid protein 2	NA
UHGV-1362721_2	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1362721_2	COG	COG2369	NA	NA
UHGV-1362721_3	UniRef90	UniRef90_R6NCU4	Putative scaffolding protein	NA
UHGV-1362721_4	eggNOG-mapper	33035.JPJF01000030_gene2294	NA	NA
UHGV-1362721_4	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1362721_10	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-1362721_13	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-1362721_13	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-1362721_13	eggNOG-mapper	1121904.ARBP01000055_gene486	Bacterial Ig-like domain (group 2)	NA
UHGV-1362721_13	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-1362721_13	COG	COG1409	3',5'-cyclic AMP phosphodiesterase CpdA	NA
UHGV-1362721_20	PHROG	phrog_16490	NA	unknown function
UHGV-1362721_20	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1362721_21	UniRef90	UniRef90_A0A345BNU6	Spore surface glycoprotein	NA
UHGV-1362721_21	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1362721_26	KOfam	K14059	int; integrase	NA
UHGV-1362721_26	PHROG	phrog_1	integrase	integration and excision
UHGV-1362721_26	UniRef90	UniRef90_U2QJL8	Site-specific recombinase, phage integrase family	NA
UHGV-1362721_26	eggNOG-mapper	1226322.HMPREF1545_00144	Belongs to the 'phage' integrase family	NA
UHGV-1362721_26	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1362721_26	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1362721_26	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-1362721_28	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1362721_28	UniRef90	UniRef90_A0A1M5ZHX2	HTH cro/C1-type domain-containing protein	NA
UHGV-1362721_28	eggNOG-mapper	565653.EGBG_01939	Helix-turn-helix XRE-family like proteins	NA
UHGV-1362721_28	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1362721_28	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1362721_28	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-1362721_35	PHROG	phrog_14970	NA	unknown function
UHGV-1362721_35	eggNOG-mapper	469604.HMPREF0946_01110	DNA recombination	NA
UHGV-1362721_35	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-1362721_35	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-1362721_35	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-1362721_36	PHROG	phrog_6244	NA	unknown function
UHGV-1362721_37	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1362721_37	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1362721_37	UniRef90	UniRef90_A0A316RXZ4	Single-stranded DNA-binding protein	NA
UHGV-1362721_37	eggNOG-mapper	1121334.KB911069_gene1617	Single-stranded DNA-binding protein	NA
UHGV-1362721_37	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1362721_37	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1362721_37	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1362721_37	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1362721_37	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1362721_38	PHROG	phrog_9474	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1362721_38	eggNOG-mapper	1226322.HMPREF1545_00016	HNH endonuclease	NA
UHGV-1362721_38	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1362721_41	PHROG	phrog_2999	NA	unknown function
UHGV-1362721_42	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1362721_42	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1362721_42	UniRef90	UniRef90_A0A843HIU7	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1362721_42	eggNOG-mapper	796940.HMPREF9628_00163	Endodeoxyribonuclease RusA	NA
UHGV-1362721_42	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1362721_42	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1362721_42	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-1362721_44	PHROG	phrog_2412	NA	unknown function
UHGV-1362721_45	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1362721_45	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1362721_45	UniRef90	UniRef90_A0A0X8VA91	Terminase-like family protein	NA
UHGV-1362721_45	eggNOG-mapper	642492.Clole_0814	Phage terminase, large subunit, PBSX family	NA
UHGV-1362721_45	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1362721_45	COG	COG1783	Phage terminase large subunit	NA
UHGV-1362721_45	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1362721_46	PHROG	phrog_533	portal protein	head and packaging
UHGV-1362721_46	eggNOG-mapper	1232443.BAIA02000078_gene36	NA	NA
UHGV-1362721_46	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1362721_47	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1362721_47	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1362721_47	UniRef90	UniRef90_UPI00055C7461	site-specific DNA-methyltransferase	NA
UHGV-1362721_47	eggNOG-mapper	1508644.SFBmNL_00843	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-1362721_47	PADLOC	MTase_II_00051	Type II methyltransferase	RM
UHGV-1362721_47	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1362721_47	COG	COG2189	Adenine specific DNA methylase Mod	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1362721	Yes	35,224 bps	54.91%	100.00%	0.9785
UHGV-1362717	No	35,203 bps	54.90%	100.00%	0.9786
UHGV-1363378	No	35,161 bps	54.90%	100.00%	0.9786
UHGV-1503584	No	35,234 bps	54.90%	99.90%	0.9767
UHGV-1505655	No	33,383 bps	54.42%	94.77%	0.9776
UHGV-1446863	No	28,003 bps	54.85%	79.50%	0.9773
UHGV-1467064	No	22,453 bps	55.21%	63.74%	0.9793
UHGV-1384706	No	22,383 bps	55.17%	63.54%	0.9770