vOTU-003453

Overview

vOTU representative UHGV-0199393

No. of genomes 8

Genome length 42,472 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-003453
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00155 › vSUBFAM-00348 › vGENUS-14804 › vSUBGEN-25216 › vOTU-003453
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199393
BioSample	SAMN06164954
Genome length	42,472 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	67
CDS density	89.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199393_1	PHROG	phrog_5132	NA	unknown function
UHGV-0199393_5	PHROG	phrog_881	holin	lysis
UHGV-0199393_5	UniRef90	UniRef90_UPI00189D3A4F	phage holin	NA
UHGV-0199393_5	eggNOG-mapper	476272.RUMHYD_01966	Putative phage holin Dp-1	NA
UHGV-0199393_5	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0199393_5	Structural annotation	PF16938	NA	NA
UHGV-0199393_6	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0199393_6	PHROG	phrog_435	endolysin	lysis
UHGV-0199393_6	UniRef90	UniRef90_A0A810PUG7	SPOR domain-containing protein	NA
UHGV-0199393_6	eggNOG-mapper	994573.T472_0210960	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0199393_6	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0199393_6	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0199393_6	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0199393_7	PHROG	phrog_1863	NA	unknown function
UHGV-0199393_7	UniRef90	UniRef90_A0A8D9UH94	Hemolysin	NA
UHGV-0199393_7	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-0199393_11	UniRef90	UniRef90_A0A8D9PDZ3	Holliday junction resolvase	NA
UHGV-0199393_11	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0199393_12	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0199393_12	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0199393_12	UniRef90	UniRef90_A0A8D9PDR8	Chromatin remodeling complex ATPase	NA
UHGV-0199393_12	eggNOG-mapper	318464.IO99_06995	snf2 family	NA
UHGV-0199393_12	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0199393_12	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0199393_12	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0199393_12	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0199393_12	Structural annotation	PF00176, PF00271, MF_01821, NF041790, COG0553	NA	NA
UHGV-0199393_13	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0199393_13	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0199393_13	UniRef90	UniRef90_A0A5H2QEN2	Putative DNA polymerase II	NA
UHGV-0199393_13	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0199393_13	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0199393_14	PHROG	phrog_25862	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0199393_14	UniRef90	UniRef90_UPI000BECAF6B	HNH endonuclease	NA
UHGV-0199393_14	eggNOG-mapper	1116482.K9L503_9CAUD	NA	NA
UHGV-0199393_14	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0199393_14	Structural annotation	PF13392, NF008448	NA	NA
UHGV-0199393_15	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0199393_15	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0199393_15	UniRef90	UniRef90_A0A8D9PDS0	DNA polymerase	NA
UHGV-0199393_15	eggNOG-mapper	10685.B6V2J7_BPSP1	DNA polymerase family A	NA
UHGV-0199393_15	PADLOC	drt-cluster58	DRT	DRT
UHGV-0199393_15	Pfam	PF01612	3'-5' exonuclease	DNA_pol_A_exo1
UHGV-0199393_15	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0199393_16	PHROG	phrog_19058	NA	unknown function
UHGV-0199393_16	UniRef90	UniRef90_A0A7T8IX45	DNA guanine transglycosylase	NA
UHGV-0199393_16	Structural annotation	PF20314, MF_00168, TIGR00449, COG0343	NA	NA
UHGV-0199393_17	PHROG	phrog_18716	NA	unknown function
UHGV-0199393_17	UniRef90	UniRef90_A0A1V5SAD6	NA	NA
UHGV-0199393_17	eggNOG-mapper	1200792.AKYF01000019_gene4755	NA	NA
UHGV-0199393_17	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0199393_17	Structural annotation	PF18909	NA	NA
UHGV-0199393_18	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-0199393_18	UniRef90	UniRef90_A0A8D9PDV7	NTP-PPase	NA
UHGV-0199393_18	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-0199393_18	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-0199393_18	Structural annotation	PF12643, MF_01020, NF001610, COG0140	NA	NA
UHGV-0199393_19	KOfam	K09125	yhhQ; queuosine precursor transporter	NA
UHGV-0199393_19	PHROG	phrog_4899	NA	unknown function
UHGV-0199393_19	UniRef90	UniRef90_A0A2K9P3T0	Probable queuosine precursor transporter	NA
UHGV-0199393_19	eggNOG-mapper	471855.Shel_22470	queuosine salvage	NA
UHGV-0199393_19	Pfam	PF02592	Putative vitamin uptake transporter	Vut_1
UHGV-0199393_19	NCBIFam	TIGR00697.1	queuosine precursor transporter	NA
UHGV-0199393_19	COG	COG1738	NA	NA
UHGV-0199393_19	HAMAP	MF_02088	Probable queuosine precursor transporter	NA
UHGV-0199393_19	Structural annotation	PF02592, MF_02088, TIGR00697, COG1738	NA	NA
UHGV-0199393_20	PHROG	phrog_17812	NA	unknown function
UHGV-0199393_20	eggNOG-mapper	419610.Mext_0158	NA	NA
UHGV-0199393_20	Structural annotation	PF01242, TIGR00039, COG0720	NA	NA
UHGV-0199393_22	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0199393_22	PHROG	phrog_18685	NA	unknown function
UHGV-0199393_22	UniRef90	UniRef90_A0A8D9PDW5	DNA directed DNA polymerase	NA
UHGV-0199393_22	eggNOG-mapper	360911.EAT1b_0006	DNA primase activity	NA
UHGV-0199393_22	PADLOC	drt-cluster192	DRT	DRT
UHGV-0199393_22	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0199393_22	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0199393_22	Pfam	PF00493	MCM P-loop domain	MCM
UHGV-0199393_22	COG	COG1241	DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family	NA
UHGV-0199393_22	Structural annotation	PF00493, PF01807, PF13155, PF14947, MF_00974, MF_01314, NF040949, TIGR01391, COG1241	NA	NA
UHGV-0199393_23	PHROG	phrog_3724	NA	unknown function
UHGV-0199393_23	UniRef90	UniRef90_A0A544U8C1	NA	NA
UHGV-0199393_23	Pfam	PF05037	NA	DUF669
UHGV-0199393_23	Structural annotation	PF05037, NF011800	NA	NA
UHGV-0199393_24	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0199393_24	UniRef90	UniRef90_A0A8D9PDX3	AAA domain protein	NA
UHGV-0199393_24	Pfam	PF13479	AAA domain	AAA_24
UHGV-0199393_24	COG	COG1100	GTPase SAR1 family domain	NA
UHGV-0199393_24	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0199393_26	PHROG	phrog_3489	NA	unknown function
UHGV-0199393_26	UniRef90	UniRef90_A0A8D9PE01	DNA-binding domain protein	NA
UHGV-0199393_26	Structural annotation	PF19157, NF002506	NA	NA
UHGV-0199393_27	KOfam	K07699	spo0A; two-component system, response regulator, stage 0 sporulation protein A	NA
UHGV-0199393_27	PHROG	phrog_37855	NA	unknown function
UHGV-0199393_27	UniRef90	UniRef90_R6EUV6	Spo0A_C domain-containing protein	NA
UHGV-0199393_27	eggNOG-mapper	1105031.HMPREF1141_0457	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	NA
UHGV-0199393_27	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-0199393_27	COG	COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	NA
UHGV-0199393_29	PHROG	phrog_1218	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0199393_29	Pfam	PF12705	PD-(D/E)XK nuclease superfamily	PDDEXK_1
UHGV-0199393_29	Structural annotation	PF12705, TIGR00372, COG2887	NA	NA
UHGV-0199393_31	UniRef90	UniRef90_A0A8D9PE04	Cyanate hydratase	NA
UHGV-0199393_34	PHROG	phrog_18750	NA	unknown function
UHGV-0199393_34	eggNOG-mapper	1203606.HMPREF1526_01876	Cell wall hydrolase	NA
UHGV-0199393_34	COG	COG3773	Cell wall hydrolase CwlJ, involved in spore germination	NA
UHGV-0199393_52	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0199393_52	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0199393_52	UniRef90	UniRef90_A0A8D9PDX0	Large terminase	NA
UHGV-0199393_52	eggNOG-mapper	1329516.JPST01000014_gene657	Phage terminase, large subunit	NA
UHGV-0199393_52	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0199393_52	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0199393_52	COG	COG1783	Phage terminase large subunit	NA
UHGV-0199393_52	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0199393_53	PHROG	phrog_533	portal protein	head and packaging
UHGV-0199393_53	UniRef90	UniRef90_A0A8D9PDR4	Portal protein	NA
UHGV-0199393_53	eggNOG-mapper	86416.Clopa_3381	PFAM Phage portal protein, SPP1 Gp6-like	NA
UHGV-0199393_53	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0199393_53	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0199393_54	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0199393_54	UniRef90	UniRef90_A0A8D9PDR7	Minor structural protein	NA
UHGV-0199393_54	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0199393_54	Structural annotation	PF06810	NA	NA
UHGV-0199393_55	PHROG	phrog_247	major head protein	head and packaging
UHGV-0199393_55	UniRef90	UniRef90_A0A3D0LY55	Coat protein	NA
UHGV-0199393_55	eggNOG-mapper	1304866.K413DRAFT_3038	NA	NA
UHGV-0199393_55	Pfam	PF20036	Major capsid protein 13-like	Gp13-like
UHGV-0199393_55	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0199393_57	PHROG	phrog_477	head-tail adaptor Ad1	connector
UHGV-0199393_57	UniRef90	UniRef90_A0A8D9UHB0	Putative head tail connector protein	NA
UHGV-0199393_57	Pfam	PF20557	Putative DnaT-like ssDNA binding protein	DnaT_2
UHGV-0199393_57	Structural annotation	PF20557	NA	NA
UHGV-0199393_58	Structural annotation	PF10665, TIGR01563	NA	NA
UHGV-0199393_59	UniRef90	UniRef90_A0A8D9PDS5	Minor capsid protein	NA
UHGV-0199393_60	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0199393_60	Structural annotation	PF12691	NA	NA
UHGV-0199393_61	PHROG	phrog_1407	major tail protein	tail
UHGV-0199393_61	UniRef90	UniRef90_A0A8D9UH75	Major tail protein	NA
UHGV-0199393_61	eggNOG-mapper	997346.HMPREF9374_2640	Phage tail tube protein	NA
UHGV-0199393_61	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0199393_61	COG	COG5437	Phage tail protein, TP901-1 family	NA
UHGV-0199393_61	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0199393_62	Structural annotation	PF11836	NA	NA
UHGV-0199393_64	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0199393_64	UniRef90	UniRef90_A0A8D9PDW4	Minor tail protein	NA
UHGV-0199393_64	eggNOG-mapper	445972.ANACOL_01854	tape measure	NA
UHGV-0199393_64	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0199393_64	Structural annotation	PF08919	NA	NA
UHGV-0199393_65	PHROG	phrog_1194	NA	unknown function
UHGV-0199393_65	eggNOG-mapper	60520.HR47_13415	NA	NA
UHGV-0199393_65	Pfam	PF20458	NA	DUF6711
UHGV-0199393_65	Structural annotation	PF20458, TIGR01633, COG4718	NA	NA
UHGV-0199393_66	PHROG	phrog_6616	tail protein	tail
UHGV-0199393_66	UniRef90	UniRef90_A0A0D0SC74	TWA4_scaffold00001, whole genome shotgun sequence	NA
UHGV-0199393_66	eggNOG-mapper	1262449.CP6013_3213	Phage minor structural protein	NA
UHGV-0199393_66	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0199393_66	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0199393_67	PHROG	phrog_372	tail protein	tail
UHGV-0199393_67	UniRef90	UniRef90_A0A3E3E6C0	Pilus assembly protein	NA
UHGV-0199393_67	eggNOG-mapper	1235802.C823_05263	NA	NA
UHGV-0199393_67	Pfam	PF05895	NA	DUF859
UHGV-0199393_67	COG	COG4675	Phage tail collar domain	NA
UHGV-0199393_67	Structural annotation	PF05895, MF_04116, NF010681, COG1361	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199393	Yes	42,472 bps	45.84%	100.00%	0.9742
UHGV-1350579	No	42,153 bps	45.96%	100.00%	0.9759
UHGV-0254277	No	42,481 bps	45.83%	98.66%	0.9722
UHGV-0167524	No	42,456 bps	45.96%	98.60%	0.9728
UHGV-1469680	No	42,456 bps	45.96%	98.60%	0.9728
UHGV-1769463	No	18,259 bps	46.11%	41.55%	0.9743
UHGV-1587328	No	17,027 bps	46.47%	38.89%	0.9796
UHGV-1586930	No	11,805 bps	46.51%	26.48%	0.9820