vOTU-003631

Overview

vOTU representative UHGV-0120270

No. of genomes 5

Genome length 38,313 bps

Completeness 100.00% (complete)

Host Anaerobutyricum hallii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-003631
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00209 › vGENUS-00123 › vSUBGEN-00085 › vOTU-003631
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Anaerobutyricum › Anaerobutyricum hallii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0120270
BioSample	NA
Genome length	38,313 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	60
CDS density	93.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0120270_1	PHROG	phrog_7964	NA	unknown function
UHGV-0120270_1	eggNOG-mapper	411470.RUMGNA_02189	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0120270_1	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0120270_2	PHROG	phrog_7566	NA	unknown function
UHGV-0120270_2	UniRef90	UniRef90_A0A371ATG2	Phosphoenolpyruvate carboxykinase	NA
UHGV-0120270_2	eggNOG-mapper	1304866.K413DRAFT_1198	NA	NA
UHGV-0120270_3	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0120270_3	UniRef90	UniRef90_UPI001ADD7D79	NA	NA
UHGV-0120270_3	eggNOG-mapper	180504.Q8W6N9_9CAUD	NA	NA
UHGV-0120270_3	Pfam	PF06356	NA	DUF1064
UHGV-0120270_3	Structural annotation	PF06356	NA	NA
UHGV-0120270_6	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0120270_6	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0120270_6	UniRef90	UniRef90_D4MVN1	Type I restriction-modification system methyltransferase subunit	NA
UHGV-0120270_6	eggNOG-mapper	592010.GCWU000182_001448	HsdM N-terminal domain	NA
UHGV-0120270_6	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-0120270_6	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0120270_6	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0120270_6	Structural annotation	PF02384, MF_01872, TIGR00497, COG0286	NA	NA
UHGV-0120270_7	eggNOG-mapper	592010.GCWU000182_001449	Type I restriction modification DNA specificity domain	NA
UHGV-0120270_7	Structural annotation	PF01420, COG0732	NA	NA
UHGV-0120270_9	PHROG	phrog_1455	NA	unknown function
UHGV-0120270_9	eggNOG-mapper	1567013.A0A0A7RTM3_9CAUD	NA	NA
UHGV-0120270_9	Pfam	PF21793	NA	DUF6877
UHGV-0120270_9	Structural annotation	PF21793	NA	NA
UHGV-0120270_10	UniRef90	UniRef90_UPI001C02123C	NA	NA
UHGV-0120270_10	eggNOG-mapper	411483.FAEPRAA2165_02183	NA	NA
UHGV-0120270_10	Pfam	PF07866	NA	DUF1653
UHGV-0120270_10	COG	COG4728	NA	NA
UHGV-0120270_10	Structural annotation	PF07866, TIGR02450, COG4728	NA	NA
UHGV-0120270_11	UniRef90	UniRef90_A0A285PYI3	Homeodomain-like domain	NA
UHGV-0120270_11	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0120270_11	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0120270_12	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0120270_12	UniRef90	UniRef90_A0A285PT83	Homeobox domain-like	NA
UHGV-0120270_12	eggNOG-mapper	272558.10176158	Homeodomain-like domain	NA
UHGV-0120270_12	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0120270_12	Structural annotation	PF07141	NA	NA
UHGV-0120270_13	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0120270_13	PHROG	phrog_10250	NA	unknown function
UHGV-0120270_13	UniRef90	UniRef90_A0A285PT65	Phage_term_2: phage terminase, large subunit, PBSX family	NA
UHGV-0120270_13	eggNOG-mapper	476272.RUMHYD_01756	NA	NA
UHGV-0120270_13	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0120270_13	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0120270_13	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0120270_13	COG	COG1783	Phage terminase large subunit	NA
UHGV-0120270_13	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0120270_14	PHROG	phrog_64	portal protein	head and packaging
UHGV-0120270_14	UniRef90	UniRef90_A0A285PU84	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0120270_14	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0120270_14	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0120270_14	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0120270_15	PHROG	phrog_2662	portal protein	head and packaging
UHGV-0120270_15	UniRef90	UniRef90_A0A285PUG1	Phage head morphogenesis domain	NA
UHGV-0120270_15	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0120270_15	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0120270_15	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0120270_15	COG	COG2369	NA	NA
UHGV-0120270_15	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0120270_16	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0120270_16	UniRef90	UniRef90_A0A285PXV7	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0120270_16	eggNOG-mapper	1504822.CCNO01000013_gene284	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0120270_16	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0120270_16	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0120270_16	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0120270_17	eggNOG-mapper	411469.EUBHAL_00974	CHAP domain	NA
UHGV-0120270_17	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0120270_17	Structural annotation	PF05382	NA	NA
UHGV-0120270_18	KOfam	K07273	acm; lysozyme	NA
UHGV-0120270_18	PHROG	phrog_291	endolysin	lysis
UHGV-0120270_18	UniRef90	UniRef90_A0A285PUE0	Lysozyme	NA
UHGV-0120270_18	eggNOG-mapper	1235800.C819_00458	Glycosyl hydrolases family 25	NA
UHGV-0120270_18	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0120270_18	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0120270_18	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0120270_18	Structural annotation	PF01183, PF01471, MF_02227, NF007360, COG3757, COG3409	NA	NA
UHGV-0120270_19	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-0120270_19	Structural annotation	PF06810	NA	NA
UHGV-0120270_20	PHROG	phrog_544	major head protein	head and packaging
UHGV-0120270_20	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-0120270_20	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0120270_20	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0120270_21	PHROG	phrog_1236	head protein	head and packaging
UHGV-0120270_22	PHROG	phrog_17977	NA	unknown function
UHGV-0120270_22	UniRef90	UniRef90_A0A285PT57	Phage head-tail joining protein	NA
UHGV-0120270_22	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0120270_22	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0120270_22	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0120270_23	Structural annotation	PF11367	NA	NA
UHGV-0120270_24	PHROG	phrog_885	major tail protein	tail
UHGV-0120270_24	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0120270_24	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-0120270_24	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0120270_25	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-0120270_27	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0120270_27	UniRef90	UniRef90_A0A285PTB9	Phage tail tape measure protein	NA
UHGV-0120270_27	eggNOG-mapper	641112.ACOK01000073_gene2904	Phage tail tape measure protein, TP901 family	NA
UHGV-0120270_27	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0120270_27	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0120270_27	COG	COG5283	Phage-related tail protein	NA
UHGV-0120270_27	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0120270_28	UniRef90	UniRef90_A0A285PT43	Fibronectin type III	NA
UHGV-0120270_28	eggNOG-mapper	1410624.JNKK01000045_gene550	Fibronectin type 3 domain	NA
UHGV-0120270_28	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-0120270_28	Structural annotation	PF02010, PF06995, PF16794, PF16303, PF19271, MF_04116, NF010681, TIGR02126, COG3499, COG3401	NA	NA
UHGV-0120270_29	eggNOG-mapper	1392487.JIAD01000001_gene511	NA	NA
UHGV-0120270_29	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0120270_30	eggNOG-mapper	1042156.CXIVA_07180	NA	NA
UHGV-0120270_30	Structural annotation	PF18614, MF_00216, NF003076, COG1585	NA	NA
UHGV-0120270_31	Structural annotation	PF07041	NA	NA
UHGV-0120270_33	eggNOG-mapper	476272.RUMHYD_00002	NA	NA
UHGV-0120270_33	Structural annotation	PF15432	NA	NA
UHGV-0120270_34	PHROG	phrog_2310	NA	unknown function
UHGV-0120270_35	PHROG	phrog_199	holin	lysis
UHGV-0120270_35	UniRef90	UniRef90_A0A285PUE3	Bacteriophage holin family	NA
UHGV-0120270_35	eggNOG-mapper	394503.Ccel_2943	toxin secretion phage lysis holin	NA
UHGV-0120270_35	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0120270_35	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0120270_35	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0120270_36	UniRef90	UniRef90_A0A285PXT6	Winged helix-turn-helix DNA-binding domain	NA
UHGV-0120270_37	PHROG	phrog_3754	NA	unknown function
UHGV-0120270_37	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0120270_38	PHROG	phrog_21718	NA	unknown function
UHGV-0120270_38	UniRef90	UniRef90_A0A285PT36	Consensus disorder prediction	NA
UHGV-0120270_38	eggNOG-mapper	476272.RUMHYD_01768	NA	NA
UHGV-0120270_39	PHROG	phrog_16490	NA	unknown function
UHGV-0120270_39	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0120270_40	PHROG	phrog_20016	NA	unknown function
UHGV-0120270_40	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0120270_40	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0120270_40	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0120270_41	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-0120270_41	Structural annotation	PF12510	NA	NA
UHGV-0120270_42	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0120270_43	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0120270_43	PHROG	phrog_95	integrase	integration and excision
UHGV-0120270_43	UniRef90	UniRef90_A0A285PUJ0	Resolvase, N terminal domain	NA
UHGV-0120270_43	eggNOG-mapper	1235792.C808_00048	Resolvase, N terminal domain	NA
UHGV-0120270_43	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0120270_43	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0120270_43	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0120270_43	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-0120270_44	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0120270_44	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0120270_44	UniRef90	UniRef90_UPI001ADD7D85	helix-turn-helix domain-containing protein	NA
UHGV-0120270_44	eggNOG-mapper	635013.TherJR_2556	PFAM Helix-turn-helix	NA
UHGV-0120270_44	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0120270_44	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0120270_44	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0120270_44	NCBIFam	NF041951.1	RstR family transcriptional repressor	NA
UHGV-0120270_44	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0120270_45	UniRef90	UniRef90_A0A285PUG9	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0120270_45	eggNOG-mapper	1235790.C805_02349	Transcriptional regulator	NA
UHGV-0120270_45	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0120270_45	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0120270_45	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0120270_46	PHROG	phrog_806	NA	unknown function
UHGV-0120270_46	UniRef90	UniRef90_A0A285PTA3	NA	NA
UHGV-0120270_46	eggNOG-mapper	697329.Rumal_0454	NA	NA
UHGV-0120270_46	Pfam	PF11611	NA	DUF4352
UHGV-0120270_46	Structural annotation	PF11611, MF_00791, NF003967, COG2967	NA	NA
UHGV-0120270_48	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0120270_48	UniRef90	UniRef90_A0A416SLU4	XRE family transcriptional regulator	NA
UHGV-0120270_48	eggNOG-mapper	476272.RUMHYD_03305	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0120270_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0120270_48	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0120270_48	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0120270_49	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0120270_49	PHROG	phrog_2104	NA	unknown function
UHGV-0120270_49	UniRef90	UniRef90_C0CQZ3	HTH cro/C1-type domain-containing protein	NA
UHGV-0120270_49	eggNOG-mapper	1235801.C822_00106	Helix-turn-helix XRE-family like proteins	NA
UHGV-0120270_49	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0120270_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0120270_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0120270_49	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0120270_50	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0120270_50	UniRef90	UniRef90_A0A285PXX7	ORF6C domain	NA
UHGV-0120270_50	eggNOG-mapper	642492.Clole_2799	Prophage antirepressor	NA
UHGV-0120270_50	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0120270_50	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0120270_50	COG	COG3617	Prophage antirepressor	NA
UHGV-0120270_50	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0120270_51	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0120270_51	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0120270_51	UniRef90	UniRef90_UPI001A948F13	helix-turn-helix domain-containing protein	NA
UHGV-0120270_51	eggNOG-mapper	1232453.BAIF02000002_gene1306	helix-turn-helix	NA
UHGV-0120270_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0120270_51	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0120270_51	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-0120270_53	PHROG	phrog_4707	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0120270_53	UniRef90	UniRef90_UPI0011C364A6	helix-turn-helix domain-containing protein	NA
UHGV-0120270_53	eggNOG-mapper	994573.T472_0204055	NA	NA
UHGV-0120270_53	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0120270_53	Structural annotation	NF040939, COG3355	NA	NA
UHGV-0120270_54	PHROG	phrog_9804	NA	unknown function
UHGV-0120270_54	UniRef90	UniRef90_A0A285PUF9	Loader and inhibitor of phage G40P	NA
UHGV-0120270_54	eggNOG-mapper	1121344.JHZO01000003_gene981	Loader and inhibitor of phage G40P	NA
UHGV-0120270_54	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0120270_54	Structural annotation	PF11417	NA	NA
UHGV-0120270_57	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0120270_57	UniRef90	UniRef90_A0A285PT93	Siphovirus Gp157	NA
UHGV-0120270_57	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-0120270_57	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0120270_57	Structural annotation	PF05565	NA	NA
UHGV-0120270_58	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0120270_58	UniRef90	UniRef90_UPI001ADDDE31	ERF family protein	NA
UHGV-0120270_58	eggNOG-mapper	1118057.CAGX01000020_gene1653	ERF superfamily	NA
UHGV-0120270_58	Pfam	PF04404	ERF superfamily	ERF
UHGV-0120270_58	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0120270_59	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0120270_59	UniRef90	UniRef90_A0A285PU94	Recombinase NinB	NA
UHGV-0120270_59	eggNOG-mapper	1410650.JHWL01000003_gene2850	NA	NA
UHGV-0120270_59	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0120270_60	PHROG	phrog_5070	NA	unknown function
UHGV-0120270_60	eggNOG-mapper	665950.HMPREF1025_02555	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0120270_60	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0120270_60	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0120270	Yes	38,313 bps	42.33%	100.00%	0.9800
UHGV-0124205	No	37,547 bps	42.33%	100.00%	0.9824
UHGV-1435990	No	38,528 bps	42.42%	98.59%	0.9797
UHGV-0228070	No	37,804 bps	42.27%	96.74%	0.9796
UHGV-1476043	No	30,035 bps	42.94%	76.81%	0.9802