vOTU-003698

Overview

vOTU representative UHGV-2034337

No. of genomes 5

Genome length 34,998 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-003698
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00077 › vGENUS-00413 › vSUBGEN-17781 › vOTU-003698
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2034337
BioSample	SAMEA2737743
Genome length	34,998 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	91.07%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2034337_1	PHROG	phrog_10	major head protein	head and packaging
UHGV-2034337_1	UniRef90	UniRef90_UPI001BB4749F	phage major capsid protein	NA
UHGV-2034337_1	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA
UHGV-2034337_1	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2034337_1	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2034337_2	PHROG	phrog_16951	NA	unknown function
UHGV-2034337_2	eggNOG-mapper	742738.HMPREF9460_04070	NA	NA
UHGV-2034337_2	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2034337_3	PHROG	phrog_12	portal protein	head and packaging
UHGV-2034337_3	UniRef90	UniRef90_UPI0013EF1526	phage portal protein	NA
UHGV-2034337_3	eggNOG-mapper	1007103.AFHW01000142_gene1297	Phage portal protein	NA
UHGV-2034337_3	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2034337_3	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2034337_3	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2034337_3	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2034337_5	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2034337_5	UniRef90	UniRef90_UPI0019583763	terminase large subunit	NA
UHGV-2034337_5	eggNOG-mapper	1007096.BAGW01000012_gene2374	Phage Terminase	NA
UHGV-2034337_5	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2034337_5	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2034337_5	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2034337_5	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2034337_6	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-2034337_6	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-2034337_6	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-2034337_6	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2034337_6	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-2034337_6	COG	COG3747	Phage terminase, small subunit	NA
UHGV-2034337_6	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2034337_7	PHROG	phrog_21498	NA	unknown function
UHGV-2034337_7	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-2034337_7	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-2034337_7	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-2034337_7	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2034337_7	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2034337_7	Structural annotation	PF02195, PF05869, MF_02015, TIGR00180, TIGR01712, COG1475	NA	NA
UHGV-2034337_8	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2034337_8	UniRef90	UniRef90_UPI001C022B94	HNH endonuclease	NA
UHGV-2034337_8	eggNOG-mapper	693746.OBV_19960	HNH endonuclease	NA
UHGV-2034337_8	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2034337_8	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2034337_8	Structural annotation	PF01844, COG1403	NA	NA
UHGV-2034337_9	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2034337_9	eggNOG-mapper	742738.HMPREF9460_04063	NA	NA
UHGV-2034337_9	Structural annotation	PF21578	NA	NA
UHGV-2034337_13	PHROG	phrog_22543	NA	unknown function
UHGV-2034337_14	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-2034337_14	UniRef90	UniRef90_A0A4U9RLZ8	NA	NA
UHGV-2034337_14	eggNOG-mapper	1567010.A0A0A7RU90_9VIRU	protein disulfide oxidoreductase activity	NA
UHGV-2034337_14	Structural annotation	PF12643, MF_01020, TIGR03188	NA	NA
UHGV-2034337_15	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2034337_15	PHROG	phrog_27290	NA	unknown function
UHGV-2034337_15	UniRef90	UniRef90_UPI00195EFCA8	helix-turn-helix domain-containing protein	NA
UHGV-2034337_15	eggNOG-mapper	1007096.BAGW01000033_gene1613	ParB-like nuclease domain	NA
UHGV-2034337_15	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2034337_15	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2034337_15	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2034337_15	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-2034337_16	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2034337_16	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2034337_16	UniRef90	UniRef90_A0A7X3DGW0	ParA family protein	NA
UHGV-2034337_16	eggNOG-mapper	1226322.HMPREF1545_00097	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-2034337_16	Pfam	PF13614	AAA domain	AAA_31
UHGV-2034337_16	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2034337_16	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-2034337_17	PHROG	phrog_27610	NA	unknown function
UHGV-2034337_18	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2034337_18	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-2034337_18	UniRef90	UniRef90_UPI00195856D7	AAA family ATPase	NA
UHGV-2034337_18	eggNOG-mapper	693746.OBV_27440	DnaB-like helicase N terminal domain	NA
UHGV-2034337_18	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-2034337_18	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2034337_18	COG	COG0305	Replicative DNA helicase	NA
UHGV-2034337_18	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-2034337_19	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2034337_19	UniRef90	UniRef90_UPI001EE1549C	helix-turn-helix domain-containing protein	NA
UHGV-2034337_19	eggNOG-mapper	1007096.BAGW01000033_gene1617	ROK family	NA
UHGV-2034337_19	COG	COG3355	Predicted transcriptional regulator	NA
UHGV-2034337_19	Structural annotation	PF02295, MF_01819, TIGR04176, COG3355	NA	NA
UHGV-2034337_21	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-2034337_21	UniRef90	UniRef90_U2QJH6	DNA-binding helix-turn-helix protein	NA
UHGV-2034337_21	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-2034337_21	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-2034337_21	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-2034337_21	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-2034337_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2034337_22	Structural annotation	PF21291, TIGR03070, COG3655	NA	NA
UHGV-2034337_23	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2034337_23	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2034337_23	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2034337_25	Structural annotation	PF09628	NA	NA
UHGV-2034337_26	UniRef90	UniRef90_A0A845RB47	XRE family transcriptional regulator	NA
UHGV-2034337_26	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2034337_26	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-2034337_27	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-2034337_27	UniRef90	UniRef90_UPI001A99573C	Ltp family lipoprotein	NA
UHGV-2034337_27	eggNOG-mapper	1120998.AUFC01000030_gene2202	Membrane	NA
UHGV-2034337_27	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-2034337_27	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-2034337_27	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-2034337_28	KOfam	K14059	int; integrase	NA
UHGV-2034337_28	PHROG	phrog_1	integrase	integration and excision
UHGV-2034337_28	UniRef90	UniRef90_A0A3D2G173	Tyr recombinase domain-containing protein	NA
UHGV-2034337_28	eggNOG-mapper	1469948.JPNB01000003_gene298	Belongs to the 'phage' integrase family	NA
UHGV-2034337_28	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2034337_28	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2034337_28	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-2034337_29	UniRef90	UniRef90_A0A8F0WD75	RNA polymerase sigma factor/Ubiquitin-like protein	NA
UHGV-2034337_29	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-2034337_30	UniRef90	UniRef90_A0A345BNU6	Spore surface glycoprotein	NA
UHGV-2034337_30	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2034337_31	PHROG	phrog_16490	NA	unknown function
UHGV-2034337_31	eggNOG-mapper	641112.ACOK01000103_gene525	NA	NA
UHGV-2034337_33	UniRef90	UniRef90_A0A8D9PDQ3	ECF sigma factor	NA
UHGV-2034337_33	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-2034337_34	PHROG	phrog_21357	endolysin	lysis
UHGV-2034337_34	UniRef90	UniRef90_A0A329UV62	Peptidase C51 domain-containing protein	NA
UHGV-2034337_34	eggNOG-mapper	243164.DET1070	SMART Glycoside hydrolase, family 25 subgroup	NA
UHGV-2034337_34	COG	COG1388	LysM repeat	NA
UHGV-2034337_34	Structural annotation	PF10030, TIGR02594, COG3942	NA	NA
UHGV-2034337_35	PHROG	phrog_13256	NA	unknown function
UHGV-2034337_35	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-2034337_36	UniRef90	UniRef90_A0A1T5AMW7	NAGPA domain-containing protein	NA
UHGV-2034337_36	Structural annotation	PF09992, COG4632	NA	NA
UHGV-2034337_37	PHROG	phrog_937	hemolysin	other
UHGV-2034337_37	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-2034337_39	UniRef90	UniRef90_A0A356L0N0	XkdX family protein	NA
UHGV-2034337_39	eggNOG-mapper	697281.Mahau_0596	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-2034337_39	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-2034337_39	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-2034337_41	UniRef90	UniRef90_A0A096B066	Mtd_N domain-containing protein	NA
UHGV-2034337_42	PHROG	phrog_18725	NA	unknown function
UHGV-2034337_42	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-2034337_42	Structural annotation	PF13754, COG2372	NA	NA
UHGV-2034337_43	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-2034337_43	PHROG	phrog_11157	NA	unknown function
UHGV-2034337_43	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-2034337_43	eggNOG-mapper	476272.RUMHYD_02867	NA	NA
UHGV-2034337_43	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-2034337_43	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-2034337_43	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-2034337_43	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-2034337_45	PHROG	phrog_13879	NA	unknown function
UHGV-2034337_45	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-2034337_45	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-2034337_46	eggNOG-mapper	1235797.C816_02660	NA	NA
UHGV-2034337_46	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-2034337_47	PHROG	phrog_23464	NA	unknown function
UHGV-2034337_47	UniRef90	UniRef90_UPI00189782F4	phage tail protein	NA
UHGV-2034337_47	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-2034337_47	COG	COG5412	Phage-related protein	NA
UHGV-2034337_47	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-2034337_49	PHROG	phrog_88	major tail protein	tail
UHGV-2034337_49	eggNOG-mapper	1123075.AUDP01000020_gene1518	phage major tail protein, phi13 family	NA
UHGV-2034337_49	COG	COG5492	NA	NA
UHGV-2034337_49	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-2034337_50	eggNOG-mapper	1203606.HMPREF1526_00974	NA	NA
UHGV-2034337_50	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2034337_50	Structural annotation	TIGR01725	NA	NA
UHGV-2034337_51	eggNOG-mapper	1203606.HMPREF1526_00975	NA	NA
UHGV-2034337_51	Structural annotation	PF05657	NA	NA
UHGV-2034337_52	PHROG	phrog_25	head closure Hc1	connector
UHGV-2034337_52	UniRef90	UniRef90_A0A845R2W2	Head-tail adaptor protein	NA
UHGV-2034337_52	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2034337_52	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2034337_52	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2034337_52	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2034337_53	UniRef90	UniRef90_UPI0002DDE99A	head-tail connector protein	NA
UHGV-2034337_53	eggNOG-mapper	1007096.BAGW01000033_gene1600	NA	NA
UHGV-2034337_53	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2034337_53	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2034337_54	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2034337	Yes	34,998 bps	62.34%	100.00%	0.9789
UHGV-0187644	No	34,953 bps	62.32%	100.00%	0.9798
UHGV-0070019	No	19,577 bps	62.32%	54.43%	0.9774
UHGV-0074047	No	11,117 bps	62.31%	30.29%	0.9805
UHGV-1793851	No	11,117 bps	62.31%	30.29%	0.9805