vOTU-003997

Overview

vOTU representative UHGV-0020636

No. of genomes 11

Genome length 40,844 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-003997
Number of genomes	11
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00124 › vGENUS-00131 › vSUBGEN-09218 › vOTU-003997
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020636
BioSample	SAMEA4765932
Genome length	40,844 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	65
CDS density	90.96%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0020636_2	PHROG	phrog_15303	NA	unknown function
UHGV-0020636_3	PHROG	phrog_1863	NA	unknown function
UHGV-0020636_3	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-0020636_4	KOfam	K07273	acm; lysozyme	NA
UHGV-0020636_4	PHROG	phrog_291	endolysin	lysis
UHGV-0020636_4	UniRef90	UniRef90_UPI001D0EE7D8	glycoside hydrolase family 25 protein	NA
UHGV-0020636_4	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-0020636_4	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0020636_4	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0020636_4	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0020636_6	KOfam	K12373	HEXA_B; hexosaminidase [EC:3.2.1.52]	NA
UHGV-0020636_6	UniRef90	UniRef90_A0A139N624	Beta-N-acetylhexosaminidase	NA
UHGV-0020636_6	eggNOG-mapper	1297617.JPJD01000040_gene3211	Glycosyl hydrolase family 20, catalytic domain	NA
UHGV-0020636_6	Pfam	PF00728	Glycosyl hydrolase family 20, catalytic domain	Glyco_hydro_20
UHGV-0020636_6	COG	COG3525	N-acetyl-beta-hexosaminidase	NA
UHGV-0020636_8	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0020636_8	UniRef90	UniRef90_A0A2A7AM44	Prophage_tail domain-containing protein	NA
UHGV-0020636_8	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0020636_8	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0020636_8	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0020636_8	COG	COG4926	Phage-related protein	NA
UHGV-0020636_8	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0020636_9	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0020636_9	UniRef90	UniRef90_A0A173Z1X4	Phage-related protein	NA
UHGV-0020636_9	eggNOG-mapper	908340.HMPREF9406_2569	phage tail	NA
UHGV-0020636_9	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0020636_9	COG	COG4722	Phage-related protein YomH	NA
UHGV-0020636_9	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0020636_10	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0020636_10	UniRef90	UniRef90_A0A2A7ALS3	TMP_3 domain-containing protein	NA
UHGV-0020636_10	eggNOG-mapper	1224164.B843_03450	Tail protein	NA
UHGV-0020636_10	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0020636_10	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0020636_10	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0020636_10	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0020636_13	PHROG	phrog_88	major tail protein	tail
UHGV-0020636_13	UniRef90	UniRef90_G9YSC5	Phage major tail protein, phi13 family	NA
UHGV-0020636_13	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-0020636_13	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0020636_13	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0020636_14	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0020636_14	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-0020636_14	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-0020636_14	Structural annotation	TIGR01725	NA	NA
UHGV-0020636_15	eggNOG-mapper	999413.HMPREF1094_02005	NA	NA
UHGV-0020636_15	Structural annotation	PF05657, COG3167	NA	NA
UHGV-0020636_16	PHROG	phrog_19734	NA	unknown function
UHGV-0020636_16	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-0020636_16	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0020636_17	PHROG	phrog_749	NA	unknown function
UHGV-0020636_17	UniRef90	UniRef90_A0A371IJS1	Phage gp6-like head-tail connector protein	NA
UHGV-0020636_17	eggNOG-mapper	1211817.CCAT010000053_gene2133	NA	NA
UHGV-0020636_18	PHROG	phrog_10	major head protein	head and packaging
UHGV-0020636_18	UniRef90	UniRef90_A0A2A7B712	Phage major capsid protein	NA
UHGV-0020636_18	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-0020636_18	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0020636_18	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0020636_18	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0020636_18	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0020636_18	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0020636_19	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0020636_19	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0020636_19	UniRef90	UniRef90_UPI00111E41DA	Clp protease ClpP	NA
UHGV-0020636_19	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-0020636_19	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0020636_19	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0020636_19	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0020636_20	PHROG	phrog_12	portal protein	head and packaging
UHGV-0020636_20	UniRef90	UniRef90_A0A2A7B6S8	Phage portal protein	NA
UHGV-0020636_20	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-0020636_20	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0020636_20	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0020636_20	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0020636_20	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0020636_21	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0020636_21	UniRef90	UniRef90_A0A2A7ALT4	Terminase	NA
UHGV-0020636_21	eggNOG-mapper	1235792.C808_00083	Phage terminase-like protein large subunit	NA
UHGV-0020636_21	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0020636_21	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0020636_21	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0020636_22	PHROG	phrog_13845	NA	unknown function
UHGV-0020636_22	eggNOG-mapper	1399942.U3PDR2_9CAUD	NA	NA
UHGV-0020636_22	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0020636_23	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0020636_23	UniRef90	UniRef90_A0A2A7B6I3	HNH domain-containing protein	NA
UHGV-0020636_23	eggNOG-mapper	610130.Closa_0739	HNH nucleases	NA
UHGV-0020636_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0020636_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0020636_24	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0020636_24	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0020636_24	UniRef90	UniRef90_UPI0011DC86C4	N-6 DNA methylase	NA
UHGV-0020636_24	eggNOG-mapper	1444306.JFZC01000034_gene2643	type I restriction-modification system	NA
UHGV-0020636_24	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-0020636_24	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0020636_24	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0020636_24	Structural annotation	PF02384, MF_01872, TIGR00497, COG0286	NA	NA
UHGV-0020636_27	Structural annotation	PF14354	NA	NA
UHGV-0020636_29	Structural annotation	PF04545	NA	NA
UHGV-0020636_30	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0020636_30	PHROG	phrog_4715	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0020636_30	UniRef90	UniRef90_A0A2A7B6Q0	ParB domain-containing protein	NA
UHGV-0020636_30	eggNOG-mapper	411471.SUBVAR_05842	ParB-like nuclease domain	NA
UHGV-0020636_30	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0020636_30	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0020636_30	Structural annotation	PF02195, MF_02015, TIGR03764, COG1475	NA	NA
UHGV-0020636_31	UniRef90	UniRef90_A0A845R8R0	NA	NA
UHGV-0020636_32	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0020636_32	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0020636_32	UniRef90	UniRef90_A0A2A7B6H3	AAA_31 domain-containing protein	NA
UHGV-0020636_32	eggNOG-mapper	411471.SUBVAR_05839	AAA domain	NA
UHGV-0020636_32	Pfam	PF13614	AAA domain	AAA_31
UHGV-0020636_32	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0020636_32	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0020636_34	UniRef90	UniRef90_A0A2A6ZB83	NA	NA
UHGV-0020636_34	eggNOG-mapper	748224.HMPREF9436_00735	NA	NA
UHGV-0020636_34	Pfam	PF19481	NA	DUF6017
UHGV-0020636_34	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0020636_34	Structural annotation	PF19481, PF01978, MF_01819, TIGR01610, COG5625	NA	NA
UHGV-0020636_35	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0020636_35	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0020636_35	UniRef90	UniRef90_A0A329TTF5	Single-stranded DNA-binding protein	NA
UHGV-0020636_35	eggNOG-mapper	748224.HMPREF9436_00638	Single-stranded DNA-binding protein	NA
UHGV-0020636_35	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0020636_35	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0020636_35	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0020636_35	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0020636_35	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0020636_36	PHROG	phrog_7566	NA	unknown function
UHGV-0020636_36	eggNOG-mapper	411471.SUBVAR_05830	NA	NA
UHGV-0020636_39	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0020636_39	eggNOG-mapper	411471.SUBVAR_05829	NA	NA
UHGV-0020636_39	Pfam	PF05772	NinB protein	NinB
UHGV-0020636_39	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0020636_40	PHROG	phrog_14970	NA	unknown function
UHGV-0020636_40	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0020636_40	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0020636_43	Structural annotation	PF10346, MF_00337, NF010671	NA	NA
UHGV-0020636_46	Pfam	PF08772	Nin one binding (NOB1) Zn-ribbon like	NOB1_Zn_bind
UHGV-0020636_49	Structural annotation	PF21291, TIGR03070, COG1476	NA	NA
UHGV-0020636_50	UniRef90	UniRef90_A0A2A7AM72	HTH cro/C1-type domain-containing protein	NA
UHGV-0020636_50	eggNOG-mapper	1378168.N510_01712	NA	NA
UHGV-0020636_50	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0020636_52	Structural annotation	COG5342	NA	NA
UHGV-0020636_56	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0020636_56	UniRef90	UniRef90_A0A2A7AM70	HTH cro/C1-type domain-containing protein	NA
UHGV-0020636_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0020636_56	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0020636_56	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0020636_57	KOfam	K14059	int; integrase	NA
UHGV-0020636_57	PHROG	phrog_1	integrase	integration and excision
UHGV-0020636_57	UniRef90	UniRef90_A0A367GI93	Tyr recombinase domain-containing protein	NA
UHGV-0020636_57	eggNOG-mapper	1507.HMPREF0262_00307	Phage integrase family	NA
UHGV-0020636_57	Pfam	PF02899	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
UHGV-0020636_57	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0020636_57	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0020636_57	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0020636_58	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-0020636_59	eggNOG-mapper	1408437.JNJN01000043_gene802	NA	NA
UHGV-0020636_60	PHROG	phrog_16490	NA	unknown function
UHGV-0020636_60	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0020636_64	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0020636_64	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0020636_64	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0020636_64	Structural annotation	PF01381, TIGR03070, COG1396	NA	NA
UHGV-0020636_65	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0020636	Yes	40,844 bps	52.54%	100.00%	0.9783
UHGV-0176483	No	40,844 bps	52.54%	100.00%	0.9788
UHGV-0017786	No	43,611 bps	52.92%	99.90%	0.9785
UHGV-0032826	No	42,479 bps	52.54%	99.90%	0.9780
UHGV-0014675	No	42,446 bps	52.52%	99.90%	0.9782
UHGV-1432684	No	40,313 bps	52.47%	98.96%	0.9785
UHGV-0040565	No	40,207 bps	52.47%	98.89%	0.9785
UHGV-0038064	No	31,233 bps	51.62%	76.87%	0.9797
UHGV-0016173	No	23,066 bps	52.25%	56.49%	0.9769
UHGV-0017546	No	21,539 bps	51.61%	52.81%	0.9769
UHGV-0013102	No	20,390 bps	52.82%	50.23%	0.9813