vOTU-004018

Overview

vOTU representative UHGV-1948466

No. of genomes 21

Genome length 29,277 bps

Completeness 100.00% (complete)

Host Gemmiger qucibialis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004018
Number of genomes	21
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00316 › vGENUS-00408 › vSUBGEN-06098 › vOTU-004018
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Gemmiger › Gemmiger qucibialis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1948466
BioSample	NA
Genome length	29,277 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	47
CDS density	90.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1948466_2	PHROG	phrog_19111	NA	unknown function
UHGV-1948466_2	eggNOG-mapper	1232443.BAIA02000078_gene14	nuclear chromosome segregation	NA
UHGV-1948466_2	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1948466_4	PHROG	phrog_13589	NA	unknown function
UHGV-1948466_4	eggNOG-mapper	428125.CLOLEP_01434	NA	NA
UHGV-1948466_5	PHROG	phrog_31538	NA	unknown function
UHGV-1948466_5	eggNOG-mapper	428125.CLOLEP_01433	NA	NA
UHGV-1948466_6	Structural annotation	PF12245	NA	NA
UHGV-1948466_8	PHROG	phrog_18444	NA	unknown function
UHGV-1948466_8	UniRef90	UniRef90_UPI0011788049	peptide chain release factor 2	NA
UHGV-1948466_8	eggNOG-mapper	1294142.CINTURNW_1707	NA	NA
UHGV-1948466_9	PHROG	phrog_18190	NA	unknown function
UHGV-1948466_9	eggNOG-mapper	411471.SUBVAR_06932	NA	NA
UHGV-1948466_9	Structural annotation	PF05954, PF00629, PF03424, NF033848, NF033675, COG4379	NA	NA
UHGV-1948466_10	PHROG	phrog_1194	NA	unknown function
UHGV-1948466_10	eggNOG-mapper	411471.SUBVAR_06933	NA	NA
UHGV-1948466_10	Structural annotation	PF20458, TIGR02126, COG4718	NA	NA
UHGV-1948466_11	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1948466_11	UniRef90	UniRef90_UPI001CC012E9	phage tail protein	NA
UHGV-1948466_11	eggNOG-mapper	1121864.OMO_02161	tape measure	NA
UHGV-1948466_11	COG	COG5412	Phage-related protein	NA
UHGV-1948466_11	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-1948466_12	PHROG	phrog_1633	NA	unknown function
UHGV-1948466_12	UniRef90	UniRef90_UPI001939D555	NA	NA
UHGV-1948466_12	eggNOG-mapper	883110.HMPREF9260_00651	NA	NA
UHGV-1948466_12	Pfam	PF17318	NA	DUF5361
UHGV-1948466_12	Structural annotation	PF17318	NA	NA
UHGV-1948466_13	PHROG	phrog_1526	NA	unknown function
UHGV-1948466_13	eggNOG-mapper	1423775.BAMN01000011_gene597	NA	NA
UHGV-1948466_14	PHROG	phrog_117	major tail protein	tail
UHGV-1948466_14	UniRef90	UniRef90_A0A1Y4TGT6	Phage tail protein	NA
UHGV-1948466_14	eggNOG-mapper	1121864.OMO_02158	domain, Protein	NA
UHGV-1948466_14	COG	COG5492	NA	NA
UHGV-1948466_14	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-1948466_15	PHROG	phrog_123	tail terminator	connector
UHGV-1948466_15	UniRef90	UniRef90_A0A139NAV0	Phage-associated protein	NA
UHGV-1948466_15	eggNOG-mapper	1280698.AUJS01000007_gene1043	NA	NA
UHGV-1948466_15	Structural annotation	PF06141	NA	NA
UHGV-1948466_16	PHROG	phrog_387	neck protein	connector
UHGV-1948466_16	UniRef90	UniRef90_A0A380KNT4	NA	NA
UHGV-1948466_16	eggNOG-mapper	1121864.OMO_02156	NA	NA
UHGV-1948466_17	PHROG	phrog_501	head closure Hc1	connector
UHGV-1948466_17	eggNOG-mapper	748224.HMPREF9436_00693	NA	NA
UHGV-1948466_17	Structural annotation	PF12206, COG5614	NA	NA
UHGV-1948466_18	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-1948466_18	UniRef90	UniRef90_E2ZGA8	Phage protein Gp19/Gp15/Gp42	NA
UHGV-1948466_18	Structural annotation	PF09355	NA	NA
UHGV-1948466_20	PHROG	phrog_10	major head protein	head and packaging
UHGV-1948466_20	UniRef90	UniRef90_A0A1Y4TJU9	Phage major capsid protein	NA
UHGV-1948466_20	eggNOG-mapper	748224.HMPREF9436_00690	Phage capsid family	NA
UHGV-1948466_20	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1948466_20	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1948466_20	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1948466_20	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1948466_21	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1948466_21	UniRef90	UniRef90_D4K444	Phage minor structural protein GP20	NA
UHGV-1948466_21	eggNOG-mapper	748224.HMPREF9436_03336	Phage minor structural protein GP20	NA
UHGV-1948466_21	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1948466_21	Structural annotation	PF06810	NA	NA
UHGV-1948466_23	PHROG	phrog_193	head maturation protease	head and packaging
UHGV-1948466_23	UniRef90	UniRef90_A0A6N8H118	CdiA_C domain-containing protein	NA
UHGV-1948466_23	eggNOG-mapper	748224.HMPREF9436_01469	NA	NA
UHGV-1948466_23	COG	COG5529	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	NA
UHGV-1948466_24	PHROG	phrog_104	portal protein	head and packaging
UHGV-1948466_24	UniRef90	UniRef90_A0A3E2U200	Phage portal protein	NA
UHGV-1948466_24	eggNOG-mapper	748224.HMPREF9436_01468	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1948466_24	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1948466_25	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1948466_25	UniRef90	UniRef90_UPI001D0087E2	terminase large subunit	NA
UHGV-1948466_25	eggNOG-mapper	1410630.JNKP01000001_gene1822	phage terminase, large subunit	NA
UHGV-1948466_25	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1948466_25	Structural annotation	PF20441, PF03354, MF_04146, NF033889, COG4626	NA	NA
UHGV-1948466_26	PHROG	phrog_1066	NA	unknown function
UHGV-1948466_26	eggNOG-mapper	445975.COLSTE_02166	NA	NA
UHGV-1948466_26	AcrCatalog	cluster_154855	NA	NA
UHGV-1948466_27	PHROG	phrog_338	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1948466_27	UniRef90	UniRef90_UPI0015F33F36	HNH endonuclease	NA
UHGV-1948466_27	eggNOG-mapper	748224.HMPREF9436_01465	NA	NA
UHGV-1948466_29	eggNOG-mapper	693746.OBV_18010	NA	NA
UHGV-1948466_29	Structural annotation	TIGR01636	NA	NA
UHGV-1948466_34	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1948466_34	UniRef90	UniRef90_UPI001C02C5E0	NA	NA
UHGV-1948466_34	eggNOG-mapper	718252.FP2_16510	NA	NA
UHGV-1948466_34	Structural annotation	PF01446	NA	NA
UHGV-1948466_41	KOfam	K07486	K07486; transposase	NA
UHGV-1948466_41	PHROG	phrog_2199	transposase	integration and excision
UHGV-1948466_41	UniRef90	UniRef90_A0A0W7TUX4	Transposase	NA
UHGV-1948466_41	eggNOG-mapper	1121334.KB911084_gene487	Transposase	NA
UHGV-1948466_41	Pfam	PF01548	Transposase	DEDD_Tnp_IS110
UHGV-1948466_41	Pfam	PF02371	Transposase IS116/IS110/IS902 family	Transposase_20
UHGV-1948466_41	NCBIFam	NF033542.1	IS110 family transposase	NA
UHGV-1948466_41	COG	COG3547	Transposase	NA
UHGV-1948466_41	Structural annotation	PF02371, NF033542, COG3547	NA	NA
UHGV-1948466_42	eggNOG-mapper	478749.BRYFOR_09933	NA	NA
UHGV-1948466_44	PHROG	phrog_1129	holin	lysis
UHGV-1948466_44	UniRef90	UniRef90_A0A367FT42	Enolase	NA
UHGV-1948466_44	eggNOG-mapper	1007096.BAGW01000036_gene2663	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1948466_44	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1948466_44	Structural annotation	PF06946	NA	NA
UHGV-1948466_45	PHROG	phrog_1863	NA	unknown function
UHGV-1948466_45	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-1948466_46	KOfam	K07273	acm; lysozyme	NA
UHGV-1948466_46	PHROG	phrog_291	endolysin	lysis
UHGV-1948466_46	UniRef90	UniRef90_A0A367G061	Peptidase_M23 domain-containing protein (Fragment)	NA
UHGV-1948466_46	eggNOG-mapper	411471.SUBVAR_06927	Glycosyl hydrolases family 25	NA
UHGV-1948466_46	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1948466_46	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1948466_46	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-1948466_46	Structural annotation	PF01551, PF01183, NF040883, COG0739, COG3757	NA	NA
UHGV-1948466_47	PHROG	phrog_24267	NA	unknown function
UHGV-1948466_47	eggNOG-mapper	508419.F8J176_9CAUD	peptidoglycan catabolic process	NA
UHGV-1948466_47	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-1948466_47	Structural annotation	COG4675	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1948466	Yes	29,277 bps	57.47%	100.00%	0.9799
UHGV-1895344	No	37,873 bps	56.58%	100.00%	0.9724
UHGV-1542056	No	36,811 bps	56.75%	99.90%	0.9715
UHGV-0014843	No	35,056 bps	56.81%	99.02%	0.9723
UHGV-0084495	No	28,541 bps	58.50%	80.61%	0.9701
UHGV-2200165	No	27,191 bps	57.87%	76.79%	0.9805
UHGV-1410141	No	25,318 bps	56.85%	71.49%	0.9758
UHGV-0135971	No	23,817 bps	58.72%	67.27%	0.9608
UHGV-0203763	No	23,316 bps	57.91%	65.85%	0.9776
UHGV-1279736	No	22,729 bps	56.82%	64.21%	0.9810
UHGV-0161408	No	17,009 bps	56.51%	47.99%	0.9663
UHGV-1664263	No	16,963 bps	58.50%	47.98%	0.9798
UHGV-1775380	No	15,207 bps	58.95%	43.00%	0.9801
UHGV-1943537	No	13,456 bps	58.74%	38.07%	0.9815
UHGV-0157312	No	13,713 bps	54.99%	36.81%	0.9755
UHGV-1818322	No	14,290 bps	56.99%	34.58%	0.9774
UHGV-1661052	No	12,518 bps	54.08%	30.28%	0.9770
UHGV-0208198	No	12,235 bps	54.07%	29.60%	0.9793
UHGV-1936485	No	10,641 bps	51.96%	25.30%	0.9732
UHGV-0180772	No	10,545 bps	52.67%	24.96%	0.9730
UHGV-1724165	No	10,350 bps	51.99%	24.61%	0.9732