vOTU-004050

Overview

vOTU representative UHGV-2050713

No. of genomes 5

Genome length 31,939 bps

Completeness 100.00% (complete)

Host CAG-103

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004050
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00665 › vGENUS-00518 › vSUBGEN-04767 › vOTU-004050
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-103
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2050713
BioSample	NA
Genome length	31,939 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	48
CDS density	92.86%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2050713_1	PHROG	phrog_1129	holin	lysis
UHGV-2050713_1	UniRef90	UniRef90_A0A8J6J3M3	Phage holin family protein	NA
UHGV-2050713_1	eggNOG-mapper	665956.HMPREF1032_03272	Phage holin family Hol44, in holin superfamily V	NA
UHGV-2050713_1	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-2050713_1	Structural annotation	PF06946	NA	NA
UHGV-2050713_2	PHROG	phrog_1863	NA	unknown function
UHGV-2050713_2	UniRef90	UniRef90_UPI001F223E8B	hemolysin XhlA family protein	NA
UHGV-2050713_2	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-2050713_3	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2050713_3	PHROG	phrog_5182	endolysin	lysis
UHGV-2050713_3	UniRef90	UniRef90_R5AZE6	N-acetylmuramoyl-L-alanine amidase family 2	NA
UHGV-2050713_3	eggNOG-mapper	1235800.C819_03946	Ami_2	NA
UHGV-2050713_3	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2050713_3	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2050713_3	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-2050713_4	PHROG	phrog_30034	NA	unknown function
UHGV-2050713_4	UniRef90	UniRef90_R6RWR8	Carbohydrate binding domain protein	NA
UHGV-2050713_4	eggNOG-mapper	411460.RUMTOR_02099	NA	NA
UHGV-2050713_4	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-2050713_4	Structural annotation	PF14600	NA	NA
UHGV-2050713_6	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-2050713_6	Structural annotation	PF13306	NA	NA
UHGV-2050713_8	PHROG	phrog_3558	tail protein	tail
UHGV-2050713_8	UniRef90	UniRef90_A0A3D1VAY1	Prophage_tail domain-containing protein	NA
UHGV-2050713_8	eggNOG-mapper	1120933.ATUY01000002_gene164	Prophage endopeptidase tail	NA
UHGV-2050713_8	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2050713_8	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-2050713_8	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2050713_8	COG	COG4926	Phage-related protein	NA
UHGV-2050713_9	eggNOG-mapper	877414.ATWA01000019_gene2049	NA	NA
UHGV-2050713_9	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-2050713_10	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-2050713_10	UniRef90	UniRef90_R5KJ24	Tape measure domain protein	NA
UHGV-2050713_10	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-2050713_10	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-2050713_10	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2050713_10	Structural annotation	COG5280	NA	NA
UHGV-2050713_11	eggNOG-mapper	1219626.HMPREF1639_07460	NA	NA
UHGV-2050713_12	eggNOG-mapper	411468.CLOSCI_00542	NA	NA
UHGV-2050713_12	Structural annotation	PF17388	NA	NA
UHGV-2050713_13	PHROG	phrog_2175	protein with Ig domain	other
UHGV-2050713_13	eggNOG-mapper	1219626.HMPREF1639_07450	NA	NA
UHGV-2050713_13	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-2050713_14	Structural annotation	PF05657	NA	NA
UHGV-2050713_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2050713_15	UniRef90	UniRef90_UPI00156FE9DA	HK97 gp10 family phage protein	NA
UHGV-2050713_15	eggNOG-mapper	1035189.HMPREF9954_1091	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2050713_15	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2050713_16	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2050713_16	UniRef90	UniRef90_A0A3D1VD59	Phage head-tail adapter protein	NA
UHGV-2050713_16	eggNOG-mapper	913865.DOT_5630	NA	NA
UHGV-2050713_16	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2050713_17	PHROG	phrog_2550	NA	unknown function
UHGV-2050713_17	eggNOG-mapper	642492.Clole_0745	NA	NA
UHGV-2050713_17	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2050713_18	PHROG	phrog_10	major head protein	head and packaging
UHGV-2050713_18	UniRef90	UniRef90_A0A3D1VAZ0	Phage major capsid protein	NA
UHGV-2050713_18	eggNOG-mapper	642492.Clole_0744	phage major capsid protein, HK97 family	NA
UHGV-2050713_18	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2050713_18	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2050713_18	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2050713_18	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2050713_19	KOfam	K06904	NA	NA
UHGV-2050713_19	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2050713_19	UniRef90	UniRef90_A0A3D1VA27	HK97 family phage prohead protease	NA
UHGV-2050713_19	eggNOG-mapper	1235798.C817_04584	Phage prohead protease, HK97 family	NA
UHGV-2050713_19	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2050713_19	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-2050713_19	COG	COG3740	Phage head maturation protease	NA
UHGV-2050713_19	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2050713_20	PHROG	phrog_12	portal protein	head and packaging
UHGV-2050713_20	UniRef90	UniRef90_A0A3D1VH02	Phage portal protein	NA
UHGV-2050713_20	eggNOG-mapper	1121423.JONT01000042_gene1421	Phage portal protein, HK97 family	NA
UHGV-2050713_20	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2050713_20	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2050713_20	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2050713_20	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-2050713_21	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2050713_21	UniRef90	UniRef90_A0A3D1VAR5	Terminase	NA
UHGV-2050713_21	eggNOG-mapper	1226322.HMPREF1545_00113	Phage Terminase	NA
UHGV-2050713_21	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2050713_21	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2050713_21	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2050713_21	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-2050713_22	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-2050713_22	UniRef90	UniRef90_E0E1I4	Putative phage terminase, small subunit, P27 family	NA
UHGV-2050713_22	eggNOG-mapper	596315.HMPREF0634_0388	Phage terminase, small subunit	NA
UHGV-2050713_22	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2050713_22	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2050713_23	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2050713_23	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2050713_23	UniRef90	UniRef90_A0A3D1VCB5	Restriction endonuclease	NA
UHGV-2050713_23	eggNOG-mapper	1121423.JONT01000065_gene1369	HNH nucleases	NA
UHGV-2050713_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2050713_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2050713_24	UniRef90	UniRef90_UPI001A9BD6FA	cysteine-rich KTR domain-containing protein	NA
UHGV-2050713_24	eggNOG-mapper	658086.HMPREF0994_02536	Cysteine-rich KTR	NA
UHGV-2050713_24	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-2050713_25	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2050713_25	eggNOG-mapper	1203606.HMPREF1526_00985	NA	NA
UHGV-2050713_25	Structural annotation	PF21578, NF033538	NA	NA
UHGV-2050713_26	PHROG	phrog_21498	NA	unknown function
UHGV-2050713_26	UniRef90	UniRef90_UPI001C8A2069	chromosome partitioning protein ParB	NA
UHGV-2050713_26	eggNOG-mapper	1121866.AUGK01000014_gene2036	DNA binding	NA
UHGV-2050713_26	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2050713_30	PHROG	phrog_3136	NA	unknown function
UHGV-2050713_30	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-2050713_30	eggNOG-mapper	642492.Clole_1416	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-2050713_30	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-2050713_30	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-2050713_31	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-2050713_32	PHROG	phrog_5781	NA	unknown function
UHGV-2050713_32	UniRef90	UniRef90_A0A2V2FSM6	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-2050713_32	eggNOG-mapper	1397284.AYMN01000083_gene2419	NA	NA
UHGV-2050713_32	Pfam	PF14359	NA	DUF4406
UHGV-2050713_32	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-2050713_32	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-2050713_33	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2050713_33	PHROG	phrog_27290	NA	unknown function
UHGV-2050713_33	UniRef90	UniRef90_A0A3D1VH09	ParB domain-containing protein	NA
UHGV-2050713_33	eggNOG-mapper	693746.OBV_19860	ParB-like nuclease domain	NA
UHGV-2050713_33	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2050713_33	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2050713_33	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-2050713_34	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2050713_34	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2050713_34	UniRef90	UniRef90_A0A3D1VAU9	ParA family protein	NA
UHGV-2050713_34	eggNOG-mapper	742738.HMPREF9460_00854	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-2050713_34	Pfam	PF13614	AAA domain	AAA_31
UHGV-2050713_34	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2050713_34	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-2050713_36	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2050713_36	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-2050713_36	UniRef90	UniRef90_A0A3D1V9Y4	DNA helicase	NA
UHGV-2050713_36	eggNOG-mapper	1007096.BAGW01000033_gene1616	DnaB-like helicase N terminal domain	NA
UHGV-2050713_36	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-2050713_36	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2050713_36	COG	COG0305	Replicative DNA helicase	NA
UHGV-2050713_36	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-2050713_37	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2050713_37	UniRef90	UniRef90_UPI001F33ADD3	helix-turn-helix domain-containing protein	NA
UHGV-2050713_37	eggNOG-mapper	1297617.JPJD01000031_gene2014	COG NOG34358 non supervised orthologous group	NA
UHGV-2050713_37	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-2050713_37	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2050713_37	Structural annotation	PF02295, MF_01819, TIGR04176, COG3355	NA	NA
UHGV-2050713_38	UniRef90	UniRef90_A0A3D1V9Y1	HTH_17 domain-containing protein	NA
UHGV-2050713_38	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2050713_38	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-2050713_38	Structural annotation	PF12728, MF_01155, TIGR01764, COG3311	NA	NA
UHGV-2050713_39	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-2050713_39	UniRef90	UniRef90_A0A3D1VA62	Transcriptional regulator	NA
UHGV-2050713_39	eggNOG-mapper	1415774.U728_1274	Helix-turn-helix XRE-family like proteins	NA
UHGV-2050713_39	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-2050713_39	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-2050713_39	Structural annotation	PF01381, MF_00535, NF040522, COG1476	NA	NA
UHGV-2050713_41	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2050713_41	PHROG	phrog_2328	transcriptional repressor	transcription regulation
UHGV-2050713_41	UniRef90	UniRef90_A0A3D1VD81	XRE family transcriptional regulator	NA
UHGV-2050713_41	eggNOG-mapper	1118060.CAGZ01000030_gene1177	TRANSCRIPTIONal	NA
UHGV-2050713_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2050713_41	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2050713_41	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2050713_42	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2050713_42	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2050713_42	UniRef90	UniRef90_A0A3D1VDF3	LexA family transcriptional regulator	NA
UHGV-2050713_42	eggNOG-mapper	428125.CLOLEP_01832	DNA-binding helix-turn-helix protein	NA
UHGV-2050713_42	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2050713_42	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2050713_42	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2050713_42	Structural annotation	PF00717, PF01381, MF_00015, MF_00535, TIGR00498, NF041951, COG1974	NA	NA
UHGV-2050713_43	UniRef90	UniRef90_A0A374JQK3	HIRAN domain-containing protein	NA
UHGV-2050713_43	eggNOG-mapper	411471.SUBVAR_05817	NA	NA
UHGV-2050713_43	Pfam	PF08797	HIRAN domain	HIRAN
UHGV-2050713_43	Structural annotation	PF08797	NA	NA
UHGV-2050713_44	KOfam	K14059	int; integrase	NA
UHGV-2050713_44	PHROG	phrog_1	integrase	integration and excision
UHGV-2050713_44	UniRef90	UniRef90_A0A3D1VH24	Site-specific integrase	NA
UHGV-2050713_44	eggNOG-mapper	1297617.JPJD01000022_gene1664	Phage integrase, N-terminal SAM-like domain	NA
UHGV-2050713_44	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2050713_44	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2050713_44	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-2050713_45	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2050713_45	PHROG	phrog_95	integrase	integration and excision
UHGV-2050713_45	UniRef90	UniRef90_A0A417HSQ2	Recombinase family protein	NA
UHGV-2050713_45	eggNOG-mapper	1356854.N007_18555	Recombinase	NA
UHGV-2050713_45	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2050713_45	Pfam	PF07508	Recombinase	Recombinase
UHGV-2050713_45	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2050713_45	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-2050713_48	UniRef90	UniRef90_A0A4R1QMH6	HTH cro/C1-type domain-containing protein	NA
UHGV-2050713_48	eggNOG-mapper	445972.ANACOL_00210	NA	NA
UHGV-2050713_48	Pfam	PF13412	Winged helix-turn-helix DNA-binding	HTH_24
UHGV-2050713_48	Structural annotation	PF13560, TIGR02612, COG1396	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2050713	Yes	31,939 bps	60.69%	100.00%	0.9785
UHGV-0074279	No	31,909 bps	60.69%	100.00%	0.9785
UHGV-2198868	No	43,619 bps	57.15%	99.90%	0.9792
UHGV-2115085	No	11,989 bps	61.21%	37.57%	0.9771
UHGV-0084589	No	12,331 bps	47.17%	29.97%	0.9784