vOTU-004058

Overview

vOTU representative UHGV-0201894

No. of genomes 6

Genome length 41,751 bps

Completeness 100.00% (complete)

Host CAG-170

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004058
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00020 › vGENUS-00176 › vSUBGEN-37232 › vOTU-004058
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201894
BioSample	SAMN05414942
Genome length	41,751 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	81
CDS density	95.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201894_2	PHROG	phrog_4973	NA	unknown function
UHGV-0201894_2	UniRef90	UniRef90_UPI001D0904CC	helix-turn-helix domain-containing protein	NA
UHGV-0201894_2	eggNOG-mapper	1072685.IX83_07155	Helix-turn-helix domain	NA
UHGV-0201894_2	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0201894_2	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-0201894_6	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0201894_6	UniRef90	UniRef90_B8I936	Helix-turn-helix domain protein	NA
UHGV-0201894_6	eggNOG-mapper	394503.Ccel_3076	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0201894_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201894_6	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0201894_6	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0201894_7	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0201894_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0201894_7	UniRef90	UniRef90_UPI001E3EB2F1	helix-turn-helix domain-containing protein	NA
UHGV-0201894_7	eggNOG-mapper	696281.Desru_2782	Helix-turn-helix XRE-family like proteins	NA
UHGV-0201894_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201894_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0201894_7	Structural annotation	PF12844, MF_00535, NF041951, COG1396	NA	NA
UHGV-0201894_12	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201894_12	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0201894_12	Structural annotation	PF12844	NA	NA
UHGV-0201894_13	KOfam	K14059	int; integrase	NA
UHGV-0201894_13	PHROG	phrog_1	integrase	integration and excision
UHGV-0201894_13	UniRef90	UniRef90_A0A3D3Y5E0	Integrase	NA
UHGV-0201894_13	eggNOG-mapper	445972.ANACOL_01797	Belongs to the 'phage' integrase family	NA
UHGV-0201894_13	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0201894_13	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0201894_13	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0201894_14	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0201894_15	Structural annotation	PF12510	NA	NA
UHGV-0201894_16	PHROG	phrog_20016	NA	unknown function
UHGV-0201894_16	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0201894_16	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0201894_16	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0201894_17	PHROG	phrog_16490	NA	unknown function
UHGV-0201894_17	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0201894_18	PHROG	phrog_22984	NA	unknown function
UHGV-0201894_19	PHROG	phrog_21718	NA	unknown function
UHGV-0201894_19	eggNOG-mapper	476272.RUMHYD_01768	NA	NA
UHGV-0201894_20	PHROG	phrog_3754	NA	unknown function
UHGV-0201894_20	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0201894_21	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0201894_22	UniRef90	UniRef90_H1CEM5	SH3b domain-containing protein	NA
UHGV-0201894_22	eggNOG-mapper	525254.HMPREF0072_1273	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0201894_22	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0201894_22	Structural annotation	NF033743	NA	NA
UHGV-0201894_23	PHROG	phrog_13256	NA	unknown function
UHGV-0201894_23	eggNOG-mapper	428125.CLOLEP_01907	NA	NA
UHGV-0201894_25	PHROG	phrog_937	hemolysin	other
UHGV-0201894_25	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-0201894_26	eggNOG-mapper	1235797.C816_04174	NA	NA
UHGV-0201894_28	PHROG	phrog_37900	NA	unknown function
UHGV-0201894_28	UniRef90	UniRef90_UPI00051B4A1C	NA	NA
UHGV-0201894_28	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0201894_28	Pfam	PF19789	NA	DUF6273
UHGV-0201894_28	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0201894_28	Structural annotation	PF19789	NA	NA
UHGV-0201894_29	eggNOG-mapper	428125.CLOLEP_01435	NA	NA
UHGV-0201894_30	PHROG	phrog_13589	NA	unknown function
UHGV-0201894_30	eggNOG-mapper	742733.HMPREF9469_05009	NA	NA
UHGV-0201894_31	eggNOG-mapper	428125.CLOLEP_01433	NA	NA
UHGV-0201894_32	Structural annotation	PF08481, NF033814, COG5456	NA	NA
UHGV-0201894_33	Structural annotation	PF18614, MF_00085, NF003082, COG0361	NA	NA
UHGV-0201894_34	PHROG	phrog_26795	NA	unknown function
UHGV-0201894_34	eggNOG-mapper	742740.HMPREF9474_04294	NA	NA
UHGV-0201894_34	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0201894_35	UniRef90	UniRef90_A0A3D0W045	Fibronectin type-III domain-containing protein	NA
UHGV-0201894_35	eggNOG-mapper	1195236.CTER_5103	NA	NA
UHGV-0201894_35	NCBIFam	NF033679.1	DNRLRE domain-containing protein	NA
UHGV-0201894_35	Structural annotation	PF02010, PF06848, PF19266, MF_04116, NF033679, NF032891, TIGR01633, TIGR04488, COG3401, COG3499	NA	NA
UHGV-0201894_37	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0201894_37	eggNOG-mapper	1123312.KB904569_gene357	Phage tail tape measure protein TP901	NA
UHGV-0201894_37	COG	COG5412	Phage-related protein	NA
UHGV-0201894_37	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-0201894_39	PHROG	phrog_18646	NA	unknown function
UHGV-0201894_40	PHROG	phrog_885	major tail protein	tail
UHGV-0201894_40	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0201894_40	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-0201894_40	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0201894_41	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-0201894_41	Structural annotation	PF11367	NA	NA
UHGV-0201894_42	PHROG	phrog_17977	NA	unknown function
UHGV-0201894_42	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0201894_42	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0201894_44	PHROG	phrog_544	major head protein	head and packaging
UHGV-0201894_44	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-0201894_44	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-0201894_44	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0201894_44	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0201894_45	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0201894_45	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-0201894_45	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-0201894_45	Structural annotation	PF06810	NA	NA
UHGV-0201894_46	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0201894_46	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-0201894_46	eggNOG-mapper	1443125.Z962_05620	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0201894_46	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0201894_46	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0201894_46	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0201894_47	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0201894_47	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-0201894_47	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0201894_47	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0201894_47	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0201894_47	COG	COG2369	NA	NA
UHGV-0201894_47	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0201894_48	PHROG	phrog_64	portal protein	head and packaging
UHGV-0201894_48	UniRef90	UniRef90_UPI001AA0B7FF	phage portal protein	NA
UHGV-0201894_48	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0201894_48	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0201894_48	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0201894_49	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0201894_49	PHROG	phrog_10250	NA	unknown function
UHGV-0201894_49	UniRef90	UniRef90_UPI0018A99FCF	PBSX family phage terminase large subunit	NA
UHGV-0201894_49	eggNOG-mapper	476272.RUMHYD_01756	NA	NA
UHGV-0201894_49	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0201894_49	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0201894_49	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0201894_49	COG	COG1783	Phage terminase large subunit	NA
UHGV-0201894_49	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0201894_50	UniRef90	UniRef90_UPI0018A8F249	helix-turn-helix domain containing protein	NA
UHGV-0201894_50	eggNOG-mapper	1235790.C805_00037	NA	NA
UHGV-0201894_50	Structural annotation	PF13542	NA	NA
UHGV-0201894_51	PHROG	phrog_2657	transcriptional regulator	transcription regulation
UHGV-0201894_51	UniRef90	UniRef90_A5MYL4	Phage-related protein	NA
UHGV-0201894_51	eggNOG-mapper	431943.CKL_1850	phage regulatory protein, rha family	NA
UHGV-0201894_51	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0201894_51	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0201894_51	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0201894_51	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0201894_52	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-0201894_52	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0201894_54	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0201894_54	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0201894_54	UniRef90	UniRef90_A0A2I7RJP7	HNHc domain-containing protein	NA
UHGV-0201894_54	eggNOG-mapper	626523.GCWU000342_01108	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0201894_54	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0201894_54	Pfam	PF00692	dUTPase	dUTPase
UHGV-0201894_54	NCBIFam	NF001862.0	dUTP diphosphatase	NA
UHGV-0201894_54	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0201894_56	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0201894_56	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-0201894_56	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0201894_57	UniRef90	UniRef90_A0A1C6DFA0	FAD-dependent thymidylate synthase	NA
UHGV-0201894_57	eggNOG-mapper	397290.C810_01371	NA	NA
UHGV-0201894_57	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0201894_57	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0201894_60	PHROG	phrog_22543	NA	unknown function
UHGV-0201894_60	UniRef90	UniRef90_A0A8D9PDT5	Hydrogenase/urease nickel incorporation protein	NA
UHGV-0201894_62	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0201894_62	UniRef90	UniRef90_R6E548	Prophage pi1 protein 29	NA
UHGV-0201894_62	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-0201894_65	eggNOG-mapper	1235792.C808_01244	NA	NA
UHGV-0201894_66	Structural annotation	NF041588	NA	NA
UHGV-0201894_67	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0201894_67	eggNOG-mapper	665956.HMPREF1032_03086	COG NOG12663 non supervised orthologous group	NA
UHGV-0201894_67	Structural annotation	PF11124, MF_02210, NF040502, COG3818	NA	NA
UHGV-0201894_68	Pfam	PF04448	NA	DUF551
UHGV-0201894_68	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0201894_68	Structural annotation	NF041588	NA	NA
UHGV-0201894_70	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0201894_70	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0201894_70	UniRef90	UniRef90_A0A1C6E5W1	Methyltransferase	NA
UHGV-0201894_70	eggNOG-mapper	910314.HMPREF9220_0636	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0201894_70	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0201894_70	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0201894_70	COG	COG0863	DNA modification methylase	NA
UHGV-0201894_70	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0201894_72	PHROG	phrog_15768	NA	unknown function
UHGV-0201894_72	UniRef90	UniRef90_A0A7C1PUJ6	NA	NA
UHGV-0201894_72	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0201894_72	Structural annotation	PF07120, COG3756	NA	NA
UHGV-0201894_73	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0201894_73	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201894_73	UniRef90	UniRef90_UPI001C02B0E9	single-stranded DNA-binding protein	NA
UHGV-0201894_73	eggNOG-mapper	693746.OBV_12860	Single-strand binding protein family	NA
UHGV-0201894_73	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0201894_73	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0201894_73	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0201894_73	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0201894_73	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0201894_75	PHROG	phrog_1029	NA	unknown function
UHGV-0201894_75	eggNOG-mapper	1203606.HMPREF1526_01890	NA	NA
UHGV-0201894_75	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0201894_76	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0201894_76	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-0201894_76	eggNOG-mapper	1203606.HMPREF1526_01889	replication terminator protein, phage associated	NA
UHGV-0201894_77	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201894_77	UniRef90	UniRef90_A0A3D1LDS4	HNH domain-containing protein	NA
UHGV-0201894_77	eggNOG-mapper	1235800.C819_02254	HNH nucleases	NA
UHGV-0201894_77	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0201894_78	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0201894_78	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-0201894_78	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0201894_78	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0201894_79	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0201894_79	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-0201894_79	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-0201894_79	Pfam	PF04404	ERF superfamily	ERF
UHGV-0201894_79	Structural annotation	PF04404, COG4712	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201894	Yes	41,751 bps	51.82%	100.00%	0.9822
UHGV-1364204	No	39,636 bps	52.24%	100.00%	0.9823
UHGV-1386556	No	42,042 bps	51.83%	99.90%	0.9819
UHGV-1380346	No	41,092 bps	51.76%	99.90%	0.9825
UHGV-0141960	No	12,463 bps	50.74%	30.72%	0.9834
UHGV-0150445	No	12,507 bps	54.26%	30.55%	0.9812