vOTU-004091

Overview

vOTU representative UHGV-0201127

No. of genomes 11

Genome length 35,144 bps

Completeness 100.00% (complete)

Host UBA10281

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004091
Number of genomes	11
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 › vSUBFAM-02122 › vGENUS-03000 › vSUBGEN-26168 › vOTU-004091
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › Borkfalkiaceae › UBA10281
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201127
BioSample	SAMN09781682
Genome length	35,144 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	55
CDS density	92.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201127_1	PHROG	phrog_27197	NA	unknown function
UHGV-0201127_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0201127_1	Structural annotation	NF007410	NA	NA
UHGV-0201127_3	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0201127_3	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0201127_4	UniRef90	UniRef90_A0A354UNG6	Transcriptional regulator	NA
UHGV-0201127_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201127_4	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0201127_4	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0201127_5	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0201127_5	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0201127_5	UniRef90	UniRef90_A0A316QMP7	HTH cro/C1-type domain-containing protein	NA
UHGV-0201127_5	eggNOG-mapper	1069534.LRC_08890	sequence-specific DNA binding	NA
UHGV-0201127_5	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0201127_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201127_5	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0201127_5	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0201127_9	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201127_9	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0201127_9	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0201127_9	Structural annotation	PF04098, TIGR00607, COG5055	NA	NA
UHGV-0201127_11	PHROG	phrog_774	NA	unknown function
UHGV-0201127_11	Structural annotation	PF10458	NA	NA
UHGV-0201127_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0201127_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201127_12	UniRef90	UniRef90_R7FWV6	Single-stranded DNA-binding protein	NA
UHGV-0201127_12	eggNOG-mapper	1121423.JONT01000019_gene1545	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0201127_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0201127_12	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0201127_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0201127_12	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0201127_12	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0201127_13	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0201127_13	UniRef90	UniRef90_UPI000C817A46	NA	NA
UHGV-0201127_13	eggNOG-mapper	445974.CLORAM_02947	NA	NA
UHGV-0201127_13	Pfam	PF06356	NA	DUF1064
UHGV-0201127_13	Structural annotation	PF06356, MF_04160, NF033179, COG1591	NA	NA
UHGV-0201127_14	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0201127_14	eggNOG-mapper	1507.HMPREF0262_00435	NA	NA
UHGV-0201127_14	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0201127_14	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0201127_14	Structural annotation	PF14297	NA	NA
UHGV-0201127_18	Structural annotation	PF07374, MF_00674, TIGR01636	NA	NA
UHGV-0201127_19	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0201127_19	PHROG	phrog_17284	NA	unknown function
UHGV-0201127_19	UniRef90	UniRef90_A0A3D2D5S6	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0201127_19	eggNOG-mapper	1291050.JAGE01000001_gene476	C-5 cytosine-specific DNA methylase	NA
UHGV-0201127_19	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0201127_19	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0201127_19	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0201127_21	PHROG	phrog_3136	NA	unknown function
UHGV-0201127_21	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-0201127_21	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0201127_21	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0201127_21	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0201127_22	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0201127_22	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0201127_22	UniRef90	UniRef90_A0A3D4KZM8	PAPS_reduct domain-containing protein	NA
UHGV-0201127_22	eggNOG-mapper	1280696.ATVY01000096_gene1971	NA	NA
UHGV-0201127_22	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0201127_22	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0201127_22	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-0201127_27	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0201127_27	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0201127_27	UniRef90	UniRef90_E5BHZ1	Terminase small subunit	NA
UHGV-0201127_27	eggNOG-mapper	1123405.AUMM01000017_gene2713	Terminase, small subunit	NA
UHGV-0201127_27	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0201127_27	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0201127_27	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0201127_28	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0201127_28	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0201127_28	UniRef90	UniRef90_A0A3C1A8K4	PBSX family phage terminase large subunit	NA
UHGV-0201127_28	eggNOG-mapper	642492.Clole_0814	Phage terminase, large subunit, PBSX family	NA
UHGV-0201127_28	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0201127_28	COG	COG1783	Phage terminase large subunit	NA
UHGV-0201127_28	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0201127_29	PHROG	phrog_533	portal protein	head and packaging
UHGV-0201127_29	Structural annotation	PF05133, MF_04120, TIGR01542, COG3567	NA	NA
UHGV-0201127_30	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0201127_30	UniRef90	UniRef90_A0A2Z4GUI4	Minor capsid protein 2	NA
UHGV-0201127_30	eggNOG-mapper	997296.PB1_16234	Phage minor capsid protein 2	NA
UHGV-0201127_30	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0201127_30	COG	COG2369	NA	NA
UHGV-0201127_32	Pfam	PF13290	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
UHGV-0201127_32	Structural annotation	PF05065, PF13287, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0201127_34	Structural annotation	PF07405, TIGR01563	NA	NA
UHGV-0201127_35	UniRef90	UniRef90_A0A2Z4GU91	Minor capsid protein	NA
UHGV-0201127_36	Structural annotation	PF09393, PF05561, TIGR02126, COG5437	NA	NA
UHGV-0201127_38	Structural annotation	PF09097, TIGR02126	NA	NA
UHGV-0201127_42	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0201127_43	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0201127_45	Structural annotation	PF10651	NA	NA
UHGV-0201127_49	KOfam	K14059	int; integrase	NA
UHGV-0201127_49	PHROG	phrog_1	integrase	integration and excision
UHGV-0201127_49	UniRef90	UniRef90_A0A353EXX9	Tyr recombinase domain-containing protein	NA
UHGV-0201127_49	eggNOG-mapper	397287.C807_03910	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0201127_49	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0201127_49	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0201127_49	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0201127_49	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0201127_50	UniRef90	UniRef90_A0A354UMM3	HTH cro/C1-type domain-containing protein	NA
UHGV-0201127_50	eggNOG-mapper	411462.DORLON_02355	Putative restriction endonuclease	NA
UHGV-0201127_50	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201127_50	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-0201127_50	Structural annotation	PF01381, NF040507, COG3655	NA	NA
UHGV-0201127_53	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0201127_53	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0201127_53	UniRef90	UniRef90_A0A8J8SBE0	Helix-turn-helix transcriptional regulator	NA
UHGV-0201127_53	eggNOG-mapper	1123511.KB905868_gene209	Helix-turn-helix XRE-family like proteins	NA
UHGV-0201127_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201127_53	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0201127_53	Structural annotation	PF13560, NF041951, COG3655	NA	NA
UHGV-0201127_54	UniRef90	UniRef90_UPI000C068531	NA	NA
UHGV-0201127_54	eggNOG-mapper	632245.CLP_1602	domain protein	NA
UHGV-0201127_54	Pfam	PF05339	NA	DUF739
UHGV-0201127_54	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-0201127_55	PHROG	phrog_4433	NA	unknown function
UHGV-0201127_55	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-0201127_55	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201127	Yes	35,144 bps	45.38%	100.00%	0.9625
UHGV-0178865	No	35,063 bps	45.35%	100.00%	0.9671
UHGV-1341985	No	34,174 bps	45.27%	100.00%	0.9679
UHGV-0190195	No	34,600 bps	44.88%	99.90%	0.9589
UHGV-0298748	No	34,236 bps	45.31%	99.71%	0.9648
UHGV-0171805	No	31,385 bps	45.38%	91.13%	0.9679
UHGV-0515277	No	30,921 bps	45.24%	89.95%	0.9581
UHGV-0135392	No	29,764 bps	45.06%	86.70%	0.9695
UHGV-1477168	No	29,764 bps	45.06%	86.70%	0.9695
UHGV-0177628	No	21,733 bps	45.30%	63.14%	0.9510
UHGV-0180615	No	12,691 bps	44.07%	36.80%	0.8954