vOTU-004119

Overview

vOTU representative UHGV-0209401

No. of genomes 10

Genome length 40,143 bps

Completeness 100.00% (complete)

Host Oscillospirales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004119
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-01336 › vGENUS-01727 › vSUBGEN-04334 › vOTU-004119
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales
Host range breadth	Order
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209401
BioSample	NA
Genome length	40,143 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	71
CDS density	92.69%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209401_2	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0209401_2	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209401_2	UniRef90	UniRef90_UPI001959E3D8	AAA family ATPase	NA
UHGV-0209401_2	eggNOG-mapper	1203606.HMPREF1526_00309	nuclear chromosome segregation	NA
UHGV-0209401_2	Pfam	PF13476	AAA domain	AAA_23
UHGV-0209401_2	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0209401_2	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0209401_3	PHROG	phrog_862	NA	unknown function
UHGV-0209401_3	eggNOG-mapper	1203606.HMPREF1526_00310	NA	NA
UHGV-0209401_3	Structural annotation	PF05037, COG2965	NA	NA
UHGV-0209401_4	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0209401_4	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0209401_4	UniRef90	UniRef90_UPI00195A5026	MBL fold metallo-hydrolase	NA
UHGV-0209401_4	eggNOG-mapper	1203606.HMPREF1526_00311	Metallo-beta-lactamase superfamily	NA
UHGV-0209401_4	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0209401_4	dbAPIS	APIS058	NA	NA
UHGV-0209401_4	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0209401_4	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0209401_5	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0209401_5	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-0209401_5	eggNOG-mapper	1203606.HMPREF1526_01889	replication terminator protein, phage associated	NA
UHGV-0209401_6	PHROG	phrog_1029	NA	unknown function
UHGV-0209401_6	eggNOG-mapper	552398.HMPREF0866_01625	NA	NA
UHGV-0209401_6	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0209401_7	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0209401_7	UniRef90	UniRef90_A0A1C6D5S6	NA	NA
UHGV-0209401_7	eggNOG-mapper	1235790.C805_00030	NA	NA
UHGV-0209401_7	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0209401_7	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0209401_8	Structural annotation	PF11417	NA	NA
UHGV-0209401_10	PHROG	phrog_4433	NA	unknown function
UHGV-0209401_10	eggNOG-mapper	645991.Sgly_0315	regulation of DNA-templated transcription, elongation	NA
UHGV-0209401_10	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0209401_10	Structural annotation	PF12120, NF000318	NA	NA
UHGV-0209401_11	eggNOG-mapper	552398.HMPREF0866_03131	NA	NA
UHGV-0209401_13	PHROG	phrog_7704	NA	unknown function
UHGV-0209401_13	UniRef90	UniRef90_UPI0019214AF7	NA	NA
UHGV-0209401_13	eggNOG-mapper	155864.EDL933_3275	NA	NA
UHGV-0209401_13	Pfam	PF04448	NA	DUF551
UHGV-0209401_13	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0209401_14	PHROG	phrog_38832	NA	unknown function
UHGV-0209401_14	eggNOG-mapper	445972.ANACOL_00165	NA	NA
UHGV-0209401_14	Structural annotation	PF07073	NA	NA
UHGV-0209401_19	Structural annotation	PF19070	NA	NA
UHGV-0209401_20	eggNOG-mapper	318464.IO99_07375	NA	NA
UHGV-0209401_21	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0209401_21	Structural annotation	NF001611, COG1694	NA	NA
UHGV-0209401_24	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0209401_24	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0209401_24	UniRef90	UniRef90_A0A6A8VI04	Terminase small subunit	NA
UHGV-0209401_24	eggNOG-mapper	292414.TM1040_0800	Terminase small subunit	NA
UHGV-0209401_24	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0209401_24	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0209401_24	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0209401_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0209401_25	PHROG	phrog_10250	NA	unknown function
UHGV-0209401_25	UniRef90	UniRef90_A0A3D3Y0N9	PBSX family phage terminase large subunit	NA
UHGV-0209401_25	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-0209401_25	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0209401_25	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0209401_25	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0209401_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-0209401_25	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0209401_26	PHROG	phrog_64	portal protein	head and packaging
UHGV-0209401_26	UniRef90	UniRef90_A0A856HZB4	Phage portal protein	NA
UHGV-0209401_26	eggNOG-mapper	1256908.HMPREF0373_00485	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0209401_26	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0209401_26	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0209401_27	KOfam	K11044	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	NA
UHGV-0209401_27	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0209401_27	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-0209401_27	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0209401_27	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0209401_27	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0209401_27	COG	COG2369	NA	NA
UHGV-0209401_27	Structural annotation	PF03496, PF04233, MF_04142, NF040688, TIGR01641, COG2369	NA	NA
UHGV-0209401_29	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0209401_29	UniRef90	UniRef90_UPI001411BC8C	HK97 gp10 family phage protein	NA
UHGV-0209401_29	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0209401_29	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0209401_29	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0209401_29	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0209401_30	Structural annotation	PF18152	NA	NA
UHGV-0209401_31	UniRef90	UniRef90_A0A3E0B009	Minor structural protein GP20	NA
UHGV-0209401_31	Structural annotation	PF06810	NA	NA
UHGV-0209401_32	PHROG	phrog_544	major head protein	head and packaging
UHGV-0209401_32	UniRef90	UniRef90_A0A810PZM2	S-l_SbsC_C domain-containing protein	NA
UHGV-0209401_32	eggNOG-mapper	1347392.CCEZ01000005_gene1236	NA	NA
UHGV-0209401_32	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0209401_33	PHROG	phrog_1236	head protein	head and packaging
UHGV-0209401_34	PHROG	phrog_17977	NA	unknown function
UHGV-0209401_34	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0209401_34	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0209401_35	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-0209401_35	Structural annotation	PF11367	NA	NA
UHGV-0209401_36	PHROG	phrog_885	major tail protein	tail
UHGV-0209401_36	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0209401_36	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0209401_36	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0209401_37	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-0209401_39	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0209401_39	eggNOG-mapper	1499683.CCFF01000017_gene2565	tape measure	NA
UHGV-0209401_39	COG	COG1511	NA	NA
UHGV-0209401_40	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0209401_41	PHROG	phrog_13879	NA	unknown function
UHGV-0209401_41	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-0209401_41	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-0209401_42	Structural annotation	PF00354	NA	NA
UHGV-0209401_43	eggNOG-mapper	1226322.HMPREF1545_02881	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0209401_43	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0209401_45	UniRef90	UniRef90_A0A8J6JAX9	XkdX family protein	NA
UHGV-0209401_45	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0209401_46	PHROG	phrog_37604	NA	unknown function
UHGV-0209401_46	eggNOG-mapper	1232443.BAIA02000078_gene10	NA	NA
UHGV-0209401_47	PHROG	phrog_1129	holin	lysis
UHGV-0209401_47	UniRef90	UniRef90_UPI001D084907	phage holin family protein	NA
UHGV-0209401_47	eggNOG-mapper	1007096.BAGW01000032_gene1582	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0209401_47	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0209401_47	Structural annotation	PF06946	NA	NA
UHGV-0209401_49	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0209401_49	PHROG	phrog_435	endolysin	lysis
UHGV-0209401_49	eggNOG-mapper	1410668.JNKC01000001_gene1675	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0209401_49	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0209401_49	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0209401_49	Pfam	PF00395	S-layer homology domain	SLH
UHGV-0209401_49	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0209401_49	Structural annotation	PF01520, PF09992, PF01471, MF_00562, TIGR02883, COG0860, COG4632, COG3409	NA	NA
UHGV-0209401_50	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0209401_52	PHROG	phrog_3754	NA	unknown function
UHGV-0209401_52	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0209401_53	PHROG	phrog_21718	NA	unknown function
UHGV-0209401_53	UniRef90	UniRef90_A0A285PT36	Consensus disorder prediction	NA
UHGV-0209401_53	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0209401_54	PHROG	phrog_22984	NA	unknown function
UHGV-0209401_55	PHROG	phrog_16490	NA	unknown function
UHGV-0209401_55	eggNOG-mapper	658655.HMPREF0988_00917	NA	NA
UHGV-0209401_56	PHROG	phrog_20016	NA	unknown function
UHGV-0209401_56	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0209401_56	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0209401_56	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0209401_57	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-0209401_58	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0209401_59	KOfam	K14059	int; integrase	NA
UHGV-0209401_59	PHROG	phrog_1	integrase	integration and excision
UHGV-0209401_59	UniRef90	UniRef90_UPI0018A8CCD8	site-specific integrase	NA
UHGV-0209401_59	eggNOG-mapper	1408437.JNJN01000039_gene380	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0209401_59	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0209401_59	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0209401_59	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0209401_59	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0209401_60	KOfam	K01174	nuc; micrococcal nuclease [EC:3.1.31.1]	NA
UHGV-0209401_60	PHROG	phrog_20876	nuclease	DNA, RNA and nucleotide metabolism
UHGV-0209401_60	UniRef90	UniRef90_A0A140L9P1	Thermonuclease	NA
UHGV-0209401_60	eggNOG-mapper	1089548.KI783301_gene2029	Staphylococcal nuclease homologues	NA
UHGV-0209401_60	PADLOC	shah_acc_0212	SNc+LTD	CRISPR-CAS
UHGV-0209401_60	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-0209401_60	Pfam	PF00565	Staphylococcal nuclease homologue	SNase
UHGV-0209401_60	COG	COG1525	Endonuclease YncB, thermonuclease family	NA
UHGV-0209401_61	PHROG	phrog_87	metallo-protease	other
UHGV-0209401_61	UniRef90	UniRef90_A0A1Y3RG05	Peptidase_M78 domain-containing protein	NA
UHGV-0209401_61	eggNOG-mapper	1007096.BAGW01000011_gene2354	IrrE N-terminal-like domain	NA
UHGV-0209401_61	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0209401_61	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0209401_61	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0209401_62	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0209401_62	UniRef90	UniRef90_A0A1Y3RHT3	HTH cro/C1-type domain-containing protein	NA
UHGV-0209401_62	eggNOG-mapper	1160721.RBI_I01471	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0209401_62	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0209401_62	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0209401_63	UniRef90	UniRef90_A0A845R4W0	XRE family transcriptional regulator	NA
UHGV-0209401_63	eggNOG-mapper	742738.HMPREF9460_02486	NA	NA
UHGV-0209401_63	Structural annotation	PF13443, NF000090, COG1813	NA	NA
UHGV-0209401_67	Structural annotation	PF12728, NF040990, COG3311	NA	NA
UHGV-0209401_69	Structural annotation	PF13560	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209401	Yes	40,143 bps	56.44%	100.00%	0.9796
UHGV-0043148	No	38,102 bps	56.18%	100.00%	0.9818
UHGV-1488987	No	38,195 bps	56.22%	95.08%	0.9820
UHGV-0041723	No	37,323 bps	56.02%	92.37%	0.9821
UHGV-1514702	No	36,313 bps	55.83%	89.87%	0.9822
UHGV-1538225	No	35,422 bps	56.81%	87.99%	0.9818
UHGV-1447504	No	26,907 bps	56.46%	66.71%	0.9821
UHGV-1771772	No	15,679 bps	56.44%	39.02%	0.9827
UHGV-0147852	No	15,834 bps	56.37%	37.39%	0.9795
UHGV-0169179	No	13,146 bps	55.99%	31.00%	0.9791