vOTU-004131

Overview

vOTU representative UHGV-2017536

No. of genomes 13

Genome length 17,594 bps

Completeness 100.00% (complete)

Host Enterocloster

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004131
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00257 › vSUBFAM-03487 › vGENUS-05148 › vSUBGEN-10377 › vOTU-004131
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Enterocloster
Host range breadth	Genus
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2017536
BioSample	NA
Genome length	17,594 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	27
CDS density	77.20%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2017536_2	KOfam	K19157	yafQ; mRNA interferase YafQ [EC:3.1.-.-]	NA
UHGV-2017536_2	PHROG	phrog_7251	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UHGV-2017536_2	UniRef90	UniRef90_A0A829WHX9	Addiction module toxin, RelE/StbE family	NA
UHGV-2017536_2	eggNOG-mapper	397288.C806_02607	Bacterial toxin of type II toxin-antitoxin system, YafQ	NA
UHGV-2017536_2	Pfam	PF15738	Bacterial toxin of type II toxin-antitoxin system, YafQ	YafQ_toxin
UHGV-2017536_2	NCBIFam	TIGR02385.1	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA
UHGV-2017536_2	COG	COG3041	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module	NA
UHGV-2017536_2	Structural annotation	PF15738, TIGR00053, COG3041	NA	NA
UHGV-2017536_3	eggNOG-mapper	97139.C824_02759	NA	NA
UHGV-2017536_4	PHROG	phrog_16228	NA	unknown function
UHGV-2017536_4	UniRef90	UniRef90_A0A829W6P5	Uma2 domain-containing protein	NA
UHGV-2017536_4	eggNOG-mapper	742735.HMPREF9467_02387	Putative restriction endonuclease	NA
UHGV-2017536_4	Pfam	PF05685	Putative restriction endonuclease	Uma2
UHGV-2017536_4	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-2017536_4	Structural annotation	PF05685, COG4636	NA	NA
UHGV-2017536_5	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-2017536_5	UniRef90	UniRef90_A0A829W458	HTH cro/C1-type domain-containing protein	NA
UHGV-2017536_5	eggNOG-mapper	397288.C806_02605	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2017536_5	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2017536_5	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-2017536_5	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-2017536_7	PHROG	phrog_13890	NA	unknown function
UHGV-2017536_7	UniRef90	UniRef90_UPI001D06E573	ABC transporter ATP-binding protein	NA
UHGV-2017536_7	eggNOG-mapper	1519439.JPJG01000054_gene2127	NA	NA
UHGV-2017536_7	Structural annotation	PF10723, NF010256	NA	NA
UHGV-2017536_8	eggNOG-mapper	411459.RUMOBE_01397	NA	NA
UHGV-2017536_9	UniRef90	UniRef90_UPI001106069C	ribbon-helix-helix domain-containing protein	NA
UHGV-2017536_9	eggNOG-mapper	397290.C810_03974	NA	NA
UHGV-2017536_9	Structural annotation	PF01402, NF041793, COG4453	NA	NA
UHGV-2017536_11	eggNOG-mapper	397291.C804_01606	NA	NA
UHGV-2017536_11	Pfam	PF19157	NA	DUF5839
UHGV-2017536_12	KOfam	K14059	int; integrase	NA
UHGV-2017536_12	PHROG	phrog_1	integrase	integration and excision
UHGV-2017536_12	UniRef90	UniRef90_A0A829WHZ8	Site-specific integrase	NA
UHGV-2017536_12	eggNOG-mapper	397288.C806_02995	Phage integrase family	NA
UHGV-2017536_12	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-2017536_12	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2017536_12	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2017536_12	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-2017536_13	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2017536_13	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2017536_13	UniRef90	UniRef90_A0A829VXJ3	Transcriptional regulator	NA
UHGV-2017536_13	eggNOG-mapper	1123302.KB904185_gene810	Helix-turn-helix domain	NA
UHGV-2017536_13	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-2017536_13	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2017536_13	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2017536_13	Structural annotation	PF01381, MF_00535, NF010465, COG1476	NA	NA
UHGV-2017536_14	UniRef90	UniRef90_UPI000E43C5AB	helix-turn-helix domain-containing protein	NA
UHGV-2017536_14	eggNOG-mapper	397288.C806_02998	Helix-turn-helix XRE-family like proteins	NA
UHGV-2017536_14	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2017536_14	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2017536_15	UniRef90	UniRef90_A0A174PHS6	DNA binding domain, excisionase family	NA
UHGV-2017536_15	eggNOG-mapper	397288.C806_03001	NA	NA
UHGV-2017536_15	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-2017536_16	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2017536_16	UniRef90	UniRef90_A0A174PFR7	Phage regulatory protein	NA
UHGV-2017536_16	eggNOG-mapper	642492.Clole_1479	DnaD domain protein	NA
UHGV-2017536_16	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2017536_16	Structural annotation	PF07106, TIGR01610, COG3682	NA	NA
UHGV-2017536_17	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2017536_17	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-2017536_17	UniRef90	UniRef90_A0A174P9D1	DNA helicase	NA
UHGV-2017536_17	eggNOG-mapper	1298920.KI911353_gene2061	Participates in initiation and elongation during chromosome replication	NA
UHGV-2017536_17	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-2017536_17	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2017536_17	COG	COG0305	Replicative DNA helicase	NA
UHGV-2017536_17	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-2017536_20	PHROG	phrog_11299	NA	unknown function
UHGV-2017536_20	eggNOG-mapper	1298920.KI911353_gene2067	NA	NA
UHGV-2017536_20	Structural annotation	PF20378	NA	NA
UHGV-2017536_21	Structural annotation	PF18152	NA	NA
UHGV-2017536_22	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2017536_22	UniRef90	UniRef90_A0A173R880	Phage-related protein	NA
UHGV-2017536_22	eggNOG-mapper	476272.RUMHYD_01785	phage tail tape measure protein	NA
UHGV-2017536_22	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-2017536_22	COG	COG1511	NA	NA
UHGV-2017536_22	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2017536_23	AcrCatalog	cluster_11670	NA	NA
UHGV-2017536_25	UniRef90	UniRef90_B1V2W9	SMC domain protein	NA
UHGV-2017536_25	eggNOG-mapper	1105031.HMPREF1141_0546	NA	NA
UHGV-2017536_25	AcrCatalog	cluster_8902	NA	NA
UHGV-2017536_26	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-2017536_26	UniRef90	UniRef90_A0A829W8N9	Bro-N domain-containing protein	NA
UHGV-2017536_26	eggNOG-mapper	1069534.LRC_07110	BRO family, N-terminal domain	NA
UHGV-2017536_26	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-2017536_26	COG	COG3617	Prophage antirepressor	NA
UHGV-2017536_27	UniRef90	UniRef90_UPI001A9B2C52	antA/AntB antirepressor family protein	NA
UHGV-2017536_27	eggNOG-mapper	1423767.BALU01000006_gene807	AntA/AntB antirepressor	NA
UHGV-2017536_27	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-2017536_27	COG	COG3561	Phage anti-repressor protein Ant	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2017536	Yes	17,594 bps	40.76%	100.00%	0.9598
UHGV-0182409	No	17,594 bps	40.76%	100.00%	0.9619
UHGV-1992114	No	17,614 bps	40.57%	99.90%	0.9663
UHGV-0068705	No	17,602 bps	40.75%	99.90%	0.9638
UHGV-1336788	No	16,779 bps	40.84%	99.90%	0.9664
UHGV-2006662	No	17,260 bps	40.86%	98.10%	0.9595
UHGV-2140023	No	17,260 bps	40.86%	98.10%	0.9597
UHGV-1990752	No	17,259 bps	40.83%	98.10%	0.9612
UHGV-2086409	No	14,408 bps	40.47%	81.89%	0.9674
UHGV-2071524	No	13,031 bps	40.93%	74.07%	0.9241
UHGV-2101679	No	10,488 bps	40.94%	59.61%	0.9331
UHGV-1982938	No	9,696 bps	41.63%	55.11%	0.9647
UHGV-0434066	No	30,087 bps	39.89%	35.08%	0.9598