vOTU-004600

Overview

vOTU representative UHGV-0204072

No. of genomes 4

Genome length 38,821 bps

Completeness 100.00% (complete)

Host Veillonella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004600
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00024 › vGENUS-00955 › vSUBGEN-02182 › vOTU-004600
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204072
BioSample	SAMN11031303
Genome length	38,821 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	55
CDS density	94.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204072_1	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0204072_1	UniRef90	UniRef90_UPI000F8E0EA5	HK97 gp10 family phage protein	NA
UHGV-0204072_1	eggNOG-mapper	706434.HMPREF9429_00523	Phage virion morphogenesis	NA
UHGV-0204072_1	COG	COG5005	NA	NA
UHGV-0204072_1	Structural annotation	TIGR01725	NA	NA
UHGV-0204072_2	PHROG	phrog_19017	NA	unknown function
UHGV-0204072_2	eggNOG-mapper	706434.HMPREF9429_00522	NA	NA
UHGV-0204072_3	PHROG	phrog_18864	NA	unknown function
UHGV-0204072_3	eggNOG-mapper	706434.HMPREF9429_00521	NA	NA
UHGV-0204072_3	Structural annotation	PF06141, COG5003	NA	NA
UHGV-0204072_4	PHROG	phrog_1407	major tail protein	tail
UHGV-0204072_4	UniRef90	UniRef90_X8H8Q2	Phage major tail protein, TP901-1 family	NA
UHGV-0204072_4	eggNOG-mapper	706434.HMPREF9429_00520	Phage tail tube protein	NA
UHGV-0204072_4	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0204072_4	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-0204072_4	COG	COG5437	Phage tail protein, TP901-1 family	NA
UHGV-0204072_4	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0204072_5	eggNOG-mapper	1232428.CAVO010000021_gene798	NA	NA
UHGV-0204072_5	Structural annotation	PF19591	NA	NA
UHGV-0204072_6	PHROG	phrog_7377	NA	unknown function
UHGV-0204072_7	PHROG	phrog_12798	NA	unknown function
UHGV-0204072_7	UniRef90	UniRef90_W1V9U8	Tape measure protein	NA
UHGV-0204072_7	eggNOG-mapper	706434.HMPREF9429_00517	tape measure	NA
UHGV-0204072_7	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0204072_7	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0204072_7	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0204072_7	Structural annotation	PF20155, TIGR02675, COG3941	NA	NA
UHGV-0204072_8	PHROG	phrog_2913	glycoside hydrolase	other
UHGV-0204072_8	UniRef90	UniRef90_X8H6S9	PF09343 family protein	NA
UHGV-0204072_8	eggNOG-mapper	706434.HMPREF9429_00516	NA	NA
UHGV-0204072_8	Pfam	PF09343	NA	DUF2460
UHGV-0204072_8	COG	COG5448	NA	NA
UHGV-0204072_8	Structural annotation	PF09343, TIGR02217, COG5448	NA	NA
UHGV-0204072_9	PHROG	phrog_778	tail assembly protein	tail
UHGV-0204072_9	UniRef90	UniRef90_X8H8N4	TIGR02218 family protein	NA
UHGV-0204072_9	eggNOG-mapper	706434.HMPREF9429_00515	NA	NA
UHGV-0204072_9	Pfam	PF09931	NA	DUF2163
UHGV-0204072_9	Pfam	PF09356	Phage conserved hypothetical protein BR0599	Phage_BR0599
UHGV-0204072_9	NCBIFam	TIGR02218.1	phage conserved hypothetical protein BR0599	NA
UHGV-0204072_9	COG	COG5449	NA	NA
UHGV-0204072_9	Structural annotation	PF09931, PF09356, TIGR02218, COG5449	NA	NA
UHGV-0204072_10	KOfam	K13695	nlpC; probable lipoprotein NlpC	NA
UHGV-0204072_10	PHROG	phrog_329	minor tail protein	tail
UHGV-0204072_10	UniRef90	UniRef90_W1VEK1	NlpC/P60 domain-containing protein	NA
UHGV-0204072_10	eggNOG-mapper	706434.HMPREF9429_00514	cysteine-type peptidase activity	NA
UHGV-0204072_10	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0204072_10	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0204072_10	Structural annotation	PF00877, TIGR02219, COG0791	NA	NA
UHGV-0204072_11	PHROG	phrog_1101	tail protein	tail
UHGV-0204072_11	UniRef90	UniRef90_A0A660M257	Phage-tail_3 domain-containing protein (Fragment)	NA
UHGV-0204072_11	eggNOG-mapper	706434.HMPREF9429_00513	domain protein	NA
UHGV-0204072_11	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-0204072_11	COG	COG1511	NA	NA
UHGV-0204072_11	Structural annotation	PF13550, PF05895, NF040662, TIGR03503, COG4733	NA	NA
UHGV-0204072_12	eggNOG-mapper	546273.VEIDISOL_01075	NA	NA
UHGV-0204072_12	Structural annotation	PF17813, NF038186	NA	NA
UHGV-0204072_13	PHROG	phrog_22483	NA	unknown function
UHGV-0204072_13	eggNOG-mapper	1128111.HMPREF0870_01752	NA	NA
UHGV-0204072_13	Structural annotation	PF20622	NA	NA
UHGV-0204072_14	PHROG	phrog_199	holin	lysis
UHGV-0204072_14	UniRef90	UniRef90_X8H951	Holin family protein	NA
UHGV-0204072_14	eggNOG-mapper	883156.HMPREF9282_01264	Bacteriophage holin family	NA
UHGV-0204072_14	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0204072_14	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0204072_15	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0204072_15	PHROG	phrog_894	endolysin	lysis
UHGV-0204072_15	UniRef90	UniRef90_A0A660M1L4	NA	NA
UHGV-0204072_15	eggNOG-mapper	926561.KB900622_gene630	Peptidase M15A	NA
UHGV-0204072_15	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0204072_15	COG	COG3108	NA	NA
UHGV-0204072_15	Structural annotation	PF05951, COG3108	NA	NA
UHGV-0204072_16	PHROG	phrog_18860	NA	unknown function
UHGV-0204072_22	UniRef90	UniRef90_A0A660M252	Ribbon-helix-helix protein, CopG family	NA
UHGV-0204072_22	Pfam	PF01402	Ribbon-helix-helix protein, copG family	RHH_1
UHGV-0204072_22	Structural annotation	PF19839, TIGR04563, COG3905	NA	NA
UHGV-0204072_23	KOfam	K14059	int; integrase	NA
UHGV-0204072_23	PHROG	phrog_1	integrase	integration and excision
UHGV-0204072_23	UniRef90	UniRef90_A0A660M6S9	Site-specific integrase	NA
UHGV-0204072_23	eggNOG-mapper	1401067.HMPREF0872_00475	Belongs to the 'phage' integrase family	NA
UHGV-0204072_23	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0204072_23	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204072_23	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0204072_23	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0204072_24	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0204072_24	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204072_24	UniRef90	UniRef90_A0A660M5F6	XRE family transcriptional regulator	NA
UHGV-0204072_24	eggNOG-mapper	1111454.HMPREF1250_1028	carbohydrate binding	NA
UHGV-0204072_24	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0204072_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204072_24	COG	COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	NA
UHGV-0204072_24	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0204072_25	UniRef90	UniRef90_A0A660M5K1	XRE family transcriptional regulator	NA
UHGV-0204072_25	eggNOG-mapper	1145276.T479_12325	TRANSCRIPTIONal	NA
UHGV-0204072_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204072_25	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0204072_25	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0204072_27	PHROG	phrog_7735	excisionase	integration and excision
UHGV-0204072_27	UniRef90	UniRef90_A0A660M3W6	DNA-binding protein	NA
UHGV-0204072_27	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0204072_27	Structural annotation	PF12728, MF_01155, NF033787, COG3311	NA	NA
UHGV-0204072_31	PHROG	phrog_29844	NA	unknown function
UHGV-0204072_32	PHROG	phrog_16315	NA	unknown function
UHGV-0204072_32	UniRef90	UniRef90_UPI00040F6C65	PcfJ domain-containing protein	NA
UHGV-0204072_32	eggNOG-mapper	1401067.HMPREF0872_00420	PcfJ-like protein	NA
UHGV-0204072_32	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0204072_33	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0204072_33	PHROG	phrog_10445	NA	unknown function
UHGV-0204072_33	UniRef90	UniRef90_A0A660M765	AAA_23 domain-containing protein	NA
UHGV-0204072_33	eggNOG-mapper	1401067.HMPREF0872_00415	nuclear chromosome segregation	NA
UHGV-0204072_33	Pfam	PF13476	AAA domain	AAA_23
UHGV-0204072_33	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0204072_33	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0204072_34	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204072_34	UniRef90	UniRef90_S4U0C4	RecT protein-like protein	NA
UHGV-0204072_34	eggNOG-mapper	563192.HMPREF0179_00147	NA	NA
UHGV-0204072_34	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0204072_35	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0204072_35	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0204072_35	UniRef90	UniRef90_A0A660M5W3	MBL fold metallo-hydrolase	NA
UHGV-0204072_35	eggNOG-mapper	1401067.HMPREF0872_00405	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I	NA
UHGV-0204072_35	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0204072_35	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0204072_35	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0204072_36	Structural annotation	PF01381, NF041951, COG3655	NA	NA
UHGV-0204072_37	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204072_37	UniRef90	UniRef90_A0A660M5P0	NA	NA
UHGV-0204072_37	eggNOG-mapper	1401067.HMPREF0872_00400	NA	NA
UHGV-0204072_37	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0204072_37	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0204072_37	Structural annotation	PF14297, TIGR01446, TIGR01714	NA	NA
UHGV-0204072_38	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0204072_38	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0204072_38	UniRef90	UniRef90_A0A660M5G7	AAA family ATPase	NA
UHGV-0204072_38	eggNOG-mapper	1401067.HMPREF0872_03455	DNA-dependent DNA replication	NA
UHGV-0204072_38	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0204072_38	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0204072_38	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-0204072_40	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0204072_40	UniRef90	UniRef90_A0A660M3X9	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0204072_40	eggNOG-mapper	796940.HMPREF9628_00163	Endodeoxyribonuclease RusA	NA
UHGV-0204072_40	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0204072_40	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0204072_40	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0204072_41	PHROG	phrog_21026	NA	unknown function
UHGV-0204072_42	PHROG	phrog_236	nucleotide kinase	other
UHGV-0204072_42	UniRef90	UniRef90_A0A496PDH8	NA	NA
UHGV-0204072_42	eggNOG-mapper	936375.HMPREF1152_1061	NA	NA
UHGV-0204072_42	Pfam	PF11753	NA	DUF3310
UHGV-0204072_42	Structural annotation	PF11753	NA	NA
UHGV-0204072_43	PHROG	phrog_21026	NA	unknown function
UHGV-0204072_44	Structural annotation	PF02796, PF10013, COG4338	NA	NA
UHGV-0204072_45	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0204072_45	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0204072_45	UniRef90	UniRef90_S4U059	dUTP diphosphatase-like protein	NA
UHGV-0204072_45	eggNOG-mapper	1123489.AUAN01000002_gene619	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0204072_45	Pfam	PF00692	dUTPase	dUTPase
UHGV-0204072_45	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0204072_45	Structural annotation	PF00692, MF_00116, NF010561, COG0756	NA	NA
UHGV-0204072_47	PHROG	phrog_1558	NA	unknown function
UHGV-0204072_47	UniRef90	UniRef90_A0A6N2ZQR4	HTH_11 domain-containing protein	NA
UHGV-0204072_47	eggNOG-mapper	883156.HMPREF9282_01234	NA	NA
UHGV-0204072_47	Structural annotation	PF07374, TIGR01637	NA	NA
UHGV-0204072_48	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0204072_48	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0204072_48	UniRef90	UniRef90_A0A660M3C7	Methyltransferase	NA
UHGV-0204072_48	eggNOG-mapper	290402.Cbei_1632	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0204072_48	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0204072_48	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0204072_48	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0204072_48	COG	COG0863	DNA modification methylase	NA
UHGV-0204072_48	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0204072_49	Structural annotation	PF07141	NA	NA
UHGV-0204072_50	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-0204072_50	UniRef90	UniRef90_A0A660M2Z0	Terminase	NA
UHGV-0204072_50	eggNOG-mapper	1123489.AUAN01000010_gene364	TIGRFAM Phage	NA
UHGV-0204072_50	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0204072_50	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0204072_50	COG	COG5410	NA	NA
UHGV-0204072_50	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0204072_51	PHROG	phrog_145	portal protein	head and packaging
UHGV-0204072_51	UniRef90	UniRef90_R6WQ48	Conserved domain protein	NA
UHGV-0204072_51	eggNOG-mapper	706434.HMPREF9429_00529	NA	NA
UHGV-0204072_51	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0204072_52	PHROG	phrog_1657	head morphogenesis	head and packaging
UHGV-0204072_52	UniRef90	UniRef90_E2ZAR0	Ntox50 domain-containing protein	NA
UHGV-0204072_52	eggNOG-mapper	706434.HMPREF9429_00528	NA	NA
UHGV-0204072_52	Structural annotation	PF04233, TIGR01641	NA	NA
UHGV-0204072_53	UniRef90	UniRef90_A0A1G9ZQK6	DHHA1 domain-containing protein	NA
UHGV-0204072_53	eggNOG-mapper	706434.HMPREF9429_00526	NA	NA
UHGV-0204072_53	Structural annotation	PF06810	NA	NA
UHGV-0204072_54	PHROG	phrog_422	major head protein	head and packaging
UHGV-0204072_54	UniRef90	UniRef90_R5SNJ0	Lj928 prophage protein	NA
UHGV-0204072_54	eggNOG-mapper	888060.HMPREF9081_1550	NA	NA
UHGV-0204072_54	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204072	Yes	38,821 bps	45.26%	100.00%	0.9769
UHGV-0282370	No	38,373 bps	45.38%	100.00%	0.9800
UHGV-0229385	No	23,448 bps	45.45%	60.45%	0.9811
UHGV-0347621	No	20,987 bps	45.34%	54.14%	0.9749