vOTU-004641

Overview

vOTU representative UHGV-2023634

No. of genomes 5

Genome length 38,276 bps

Completeness 100.00% (complete)

Host Oscillospirales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004641
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 › vSUBFAM-01801 › vGENUS-03205 › vSUBGEN-04469 › vOTU-004641
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales
Host range breadth	Order
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2023634
BioSample	SAMEA2737753
Genome length	38,276 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	60
CDS density	91.28%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2023634_1	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-2023634_1	COG	COG4722	Phage-related protein YomH	NA
UHGV-2023634_2	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2023634_2	UniRef90	UniRef90_A0A1C6H6B4	Phage-related protein	NA
UHGV-2023634_2	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-2023634_2	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2023634_2	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2023634_2	COG	COG4926	Phage-related protein	NA
UHGV-2023634_2	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2023634_3	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2023634_5	PHROG	phrog_2310	NA	unknown function
UHGV-2023634_6	PHROG	phrog_1863	NA	unknown function
UHGV-2023634_6	eggNOG-mapper	748224.HMPREF9436_00408	NA	NA
UHGV-2023634_7	PHROG	phrog_1129	holin	lysis
UHGV-2023634_7	UniRef90	UniRef90_A0A1H3XEH1	Phage holin family Hol44, holin superfamily V	NA
UHGV-2023634_7	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-2023634_7	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-2023634_7	Structural annotation	PF06946	NA	NA
UHGV-2023634_8	Structural annotation	PF12802	NA	NA
UHGV-2023634_9	KOfam	K07273	acm; lysozyme	NA
UHGV-2023634_9	PHROG	phrog_291	endolysin	lysis
UHGV-2023634_9	UniRef90	UniRef90_A0A6S6X8V6	Putative Lysozyme	NA
UHGV-2023634_9	eggNOG-mapper	1415775.U729_2621	Glycosyl hydrolases family 25	NA
UHGV-2023634_9	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2023634_9	Pfam	PF19127	Choline-binding repeat	Choline_bind_3
UHGV-2023634_9	COG	COG3103	NA	NA
UHGV-2023634_9	Structural annotation	PF01183, PF19127, TIGR04035, TIGR04303, COG3757	NA	NA
UHGV-2023634_10	UniRef90	UniRef90_A0A350H2J1	HTH luxR-type domain-containing protein	NA
UHGV-2023634_10	Structural annotation	PF13404, TIGR01636	NA	NA
UHGV-2023634_11	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-2023634_11	PHROG	phrog_2104	NA	unknown function
UHGV-2023634_11	UniRef90	UniRef90_A0A355NLF8	DNA-binding protein	NA
UHGV-2023634_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2023634_11	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-2023634_15	PHROG	phrog_22984	NA	unknown function
UHGV-2023634_16	PHROG	phrog_16490	NA	unknown function
UHGV-2023634_16	eggNOG-mapper	397290.C810_05212	NA	NA
UHGV-2023634_17	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2023634_18	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-2023634_19	KOfam	K14059	int; integrase	NA
UHGV-2023634_19	PHROG	phrog_1	integrase	integration and excision
UHGV-2023634_19	UniRef90	UniRef90_UPI00195CC1EE	tyrosine-type recombinase/integrase	NA
UHGV-2023634_19	eggNOG-mapper	698758.AXY_01580	Phage integrase family	NA
UHGV-2023634_19	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-2023634_19	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2023634_19	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2023634_19	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-2023634_20	Structural annotation	PF13560, TIGR03070, COG3655	NA	NA
UHGV-2023634_22	PHROG	phrog_15667	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-2023634_22	UniRef90	UniRef90_UPI0008315240	S-layer homology domain-containing protein	NA
UHGV-2023634_22	eggNOG-mapper	411467.BACCAP_04702	S-layer homology domain	NA
UHGV-2023634_22	Pfam	PF00395	S-layer homology domain	SLH
UHGV-2023634_22	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-2023634_22	COG	COG5263	Glucan-binding domain (YG repeat)	NA
UHGV-2023634_23	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2023634_23	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2023634_23	UniRef90	UniRef90_A0A1C5PSE5	Predicted transcriptional regulator	NA
UHGV-2023634_23	eggNOG-mapper	1235797.C816_03553	DNA-binding helix-turn-helix protein	NA
UHGV-2023634_23	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2023634_23	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2023634_23	Structural annotation	PF01381, MF_00535, NF007257, COG1396	NA	NA
UHGV-2023634_26	UniRef90	UniRef90_UPI000F0633F9	DNA-binding protein	NA
UHGV-2023634_26	eggNOG-mapper	693746.OBV_43260	NA	NA
UHGV-2023634_26	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-2023634_27	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-2023634_30	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-2023634_30	COG	COG0745	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	NA
UHGV-2023634_31	eggNOG-mapper	478749.BRYFOR_07509	NA	NA
UHGV-2023634_33	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2023634_33	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-2023634_33	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2023634_33	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2023634_33	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-2023634_34	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-2023634_34	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-2023634_34	eggNOG-mapper	1203606.HMPREF1526_01889	replication terminator protein, phage associated	NA
UHGV-2023634_35	PHROG	phrog_1029	NA	unknown function
UHGV-2023634_35	eggNOG-mapper	1203606.HMPREF1526_01890	NA	NA
UHGV-2023634_35	Structural annotation	PF10065, COG5532	NA	NA
UHGV-2023634_36	PHROG	phrog_5070	NA	unknown function
UHGV-2023634_36	UniRef90	UniRef90_B0PAM0	Bacterial transferase hexapeptide repeat protein	NA
UHGV-2023634_36	eggNOG-mapper	445972.ANACOL_01820	COG NOG06285 non supervised orthologous group	NA
UHGV-2023634_36	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-2023634_36	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-2023634_36	Structural annotation	MF_01691, NF040481	NA	NA
UHGV-2023634_37	Structural annotation	PF00412	NA	NA
UHGV-2023634_38	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2023634_38	UniRef90	UniRef90_UPI001BB47349	YqaJ viral recombinase family protein	NA
UHGV-2023634_38	eggNOG-mapper	1226322.HMPREF1545_00014	YqaJ viral recombinase family	NA
UHGV-2023634_38	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-2023634_38	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-2023634_38	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-2023634_38	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-2023634_39	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-2023634_39	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2023634_39	UniRef90	UniRef90_U2SBP2	Recombination and repair protein RecT	NA
UHGV-2023634_39	eggNOG-mapper	1226322.HMPREF1545_00015	RecT family	NA
UHGV-2023634_39	Pfam	PF03837	RecT family	RecT
UHGV-2023634_39	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-2023634_39	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-2023634_39	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-2023634_40	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2023634_40	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2023634_40	UniRef90	UniRef90_A0A2V2CEG7	Single-stranded DNA-binding protein	NA
UHGV-2023634_40	eggNOG-mapper	693746.OBV_12860	Single-strand binding protein family	NA
UHGV-2023634_40	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2023634_40	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2023634_40	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2023634_40	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2023634_40	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2023634_41	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2023634_41	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-2023634_41	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-2023634_42	PHROG	phrog_5810	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2023634_42	UniRef90	UniRef90_UPI00164BB1D1	transcriptional regulator	NA
UHGV-2023634_42	eggNOG-mapper	411490.ANACAC_00800	NA	NA
UHGV-2023634_42	Structural annotation	PF01978, MF_01819, NF041413, COG0735	NA	NA
UHGV-2023634_44	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-2023634_44	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-2023634_45	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2023634_45	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2023634_45	UniRef90	UniRef90_UPI001C0E8FB7	site-specific DNA-methyltransferase	NA
UHGV-2023634_45	eggNOG-mapper	910314.HMPREF9220_0624	DNA methylase	NA
UHGV-2023634_45	PADLOC	MTase_II_00037	Type II methyltransferase	RM
UHGV-2023634_45	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2023634_45	COG	COG0863	DNA modification methylase	NA
UHGV-2023634_45	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-2023634_46	eggNOG-mapper	411459.RUMOBE_01385	NA	NA
UHGV-2023634_46	AcrCatalog	cluster_11670	NA	NA
UHGV-2023634_47	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2023634_47	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2023634_47	UniRef90	UniRef90_UPI001D11B139	HNH endonuclease	NA
UHGV-2023634_47	eggNOG-mapper	1444310.JANV01000004_gene2686	HNH endonuclease	NA
UHGV-2023634_47	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2023634_47	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2023634_48	PHROG	phrog_1066	NA	unknown function
UHGV-2023634_48	eggNOG-mapper	1203606.HMPREF1526_01333	NA	NA
UHGV-2023634_48	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2023634_49	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2023634_49	UniRef90	UniRef90_A0A1H4BNS6	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2023634_49	eggNOG-mapper	1160721.RBI_I01585	large subunit	NA
UHGV-2023634_49	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2023634_49	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2023634_49	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2023634_49	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2023634_50	PHROG	phrog_12	portal protein	head and packaging
UHGV-2023634_50	UniRef90	UniRef90_A0A1H4BNH5	Phage portal protein, HK97 family	NA
UHGV-2023634_50	eggNOG-mapper	1235755.ANAM01000006_gene2373	Phage portal protein	NA
UHGV-2023634_50	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2023634_50	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2023634_50	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2023634_51	KOfam	K06904	NA	NA
UHGV-2023634_51	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2023634_51	UniRef90	UniRef90_R6CCZ0	Phage prohead protease HK97 family	NA
UHGV-2023634_51	eggNOG-mapper	324057.Pjdr2_1542	Caudovirus prohead serine protease	NA
UHGV-2023634_51	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2023634_51	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-2023634_51	COG	COG3740	Phage head maturation protease	NA
UHGV-2023634_51	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2023634_52	PHROG	phrog_10	major head protein	head and packaging
UHGV-2023634_52	UniRef90	UniRef90_A0A1C5W5F9	Phage major capsid protein, HK97 family	NA
UHGV-2023634_52	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA
UHGV-2023634_52	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2023634_52	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2023634_52	Structural annotation	PF05065, PF09032, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2023634_53	PHROG	phrog_5223	neck protein	connector
UHGV-2023634_53	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2023634_54	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2023634_54	UniRef90	UniRef90_UPI000E207DD7	phage head closure protein	NA
UHGV-2023634_54	eggNOG-mapper	1226322.HMPREF1545_00118	NA	NA
UHGV-2023634_54	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2023634_54	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2023634_54	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2023634_55	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2023634_55	UniRef90	UniRef90_UPI00148B2708	HK97 gp10 family phage protein	NA
UHGV-2023634_55	eggNOG-mapper	198094.BA_0472	NA	NA
UHGV-2023634_55	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2023634_55	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2023634_56	eggNOG-mapper	887929.HMP0721_1261	NA	NA
UHGV-2023634_56	Structural annotation	PF20765	NA	NA
UHGV-2023634_57	PHROG	phrog_88	major tail protein	tail
UHGV-2023634_57	UniRef90	UniRef90_A0A3D5L5I4	Phage tail protein	NA
UHGV-2023634_57	eggNOG-mapper	610130.Closa_0749	phage major tail protein, phi13 family	NA
UHGV-2023634_57	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2023634_57	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2023634_58	eggNOG-mapper	1280681.AUJZ01000038_gene340	NA	NA
UHGV-2023634_58	Structural annotation	PF11836	NA	NA
UHGV-2023634_59	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-2023634_59	PHROG	phrog_5755	tail length tape measure protein	tail
UHGV-2023634_59	eggNOG-mapper	1487921.DP68_11365	tail tape measure protein	NA
UHGV-2023634_59	COG	COG1511	NA	NA
UHGV-2023634_59	Structural annotation	PF10145, COG5280	NA	NA
UHGV-2023634_60	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2023634_60	UniRef90	UniRef90_A0A1C5W6B6	Phage-related protein	NA
UHGV-2023634_60	eggNOG-mapper	1123263.AUKY01000068_gene490	tail component	NA
UHGV-2023634_60	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-2023634_60	COG	COG4722	Phage-related protein YomH	NA
UHGV-2023634_60	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2023634	Yes	38,276 bps	53.67%	100.00%	0.9817
UHGV-1368706	No	38,276 bps	53.67%	100.00%	0.9817
UHGV-0185234	No	38,390 bps	53.73%	99.90%	0.9827
UHGV-0069227	No	38,207 bps	53.62%	99.90%	0.9825
UHGV-1543412	No	37,040 bps	53.62%	98.58%	0.9826