vOTU-004940

Overview

vOTU representative UHGV-0220186

No. of genomes 4

Genome length 38,368 bps

Completeness 100.00% (complete)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-004940
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00372 › vGENUS-00435 › vSUBGEN-04062 › vOTU-004940
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0220186
BioSample	NA
Genome length	38,368 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	66
CDS density	91.98%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0220186_1	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0220186_1	UniRef90	UniRef90_A0A6I7GGF0	Terminase	NA
UHGV-0220186_1	eggNOG-mapper	1235792.C808_00083	Phage terminase-like protein large subunit	NA
UHGV-0220186_1	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0220186_1	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0220186_1	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0220186_1	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0220186_2	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0220186_2	UniRef90	UniRef90_UPI00195E8788	P27 family phage terminase small subunit	NA
UHGV-0220186_2	eggNOG-mapper	202752.JL53_00755	Phage terminase, small subunit	NA
UHGV-0220186_2	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0220186_2	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0220186_3	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0220186_3	UniRef90	UniRef90_G9YSB5	HNH domain-containing protein	NA
UHGV-0220186_3	eggNOG-mapper	574375.BAGA_00230	HNH endonuclease	NA
UHGV-0220186_3	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0220186_3	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0220186_4	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0220186_4	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-0220186_4	Structural annotation	PF05840	NA	NA
UHGV-0220186_7	UniRef90	UniRef90_A0A8D9PDK2	Zinc-ribbon containing domain	NA
UHGV-0220186_8	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0220186_8	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0220186_8	UniRef90	UniRef90_A0A417HX51	HNH endonuclease	NA
UHGV-0220186_8	eggNOG-mapper	742740.HMPREF9474_03129	HNH endonuclease	NA
UHGV-0220186_8	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0220186_8	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0220186_8	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-0220186_9	PHROG	phrog_3136	NA	unknown function
UHGV-0220186_9	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-0220186_9	eggNOG-mapper	693746.OBV_25380	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0220186_9	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0220186_9	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0220186_10	PHROG	phrog_38832	NA	unknown function
UHGV-0220186_10	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0220186_10	Structural annotation	PF11717, TIGR02450	NA	NA
UHGV-0220186_11	UniRef90	UniRef90_A0A3A6ECV8	NA	NA
UHGV-0220186_11	eggNOG-mapper	411470.RUMGNA_00214	NA	NA
UHGV-0220186_11	Pfam	PF04448	NA	DUF551
UHGV-0220186_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0220186_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0220186_12	UniRef90	UniRef90_UPI001C02B0E9	single-stranded DNA-binding protein	NA
UHGV-0220186_12	eggNOG-mapper	1007096.BAGW01000007_gene1922	Single-strand binding protein family	NA
UHGV-0220186_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0220186_12	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0220186_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0220186_12	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0220186_12	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0220186_15	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0220186_15	PHROG	phrog_27290	NA	unknown function
UHGV-0220186_15	UniRef90	UniRef90_UPI00195EFCA8	helix-turn-helix domain-containing protein	NA
UHGV-0220186_15	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-0220186_15	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0220186_15	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0220186_15	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0220186_15	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-0220186_16	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0220186_16	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0220186_16	UniRef90	UniRef90_UPI001C0253FB	ParA family protein	NA
UHGV-0220186_16	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0220186_16	Pfam	PF13614	AAA domain	AAA_31
UHGV-0220186_16	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0220186_16	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0220186_18	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0220186_18	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0220186_18	UniRef90	UniRef90_UPI001C0112E5	AAA family ATPase	NA
UHGV-0220186_18	eggNOG-mapper	742738.HMPREF9460_00852	Participates in initiation and elongation during chromosome replication	NA
UHGV-0220186_18	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0220186_18	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0220186_18	COG	COG0305	Replicative DNA helicase	NA
UHGV-0220186_18	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0220186_19	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0220186_19	UniRef90	UniRef90_A0A7X3DHC7	Helix-turn-helix domain-containing protein	NA
UHGV-0220186_19	eggNOG-mapper	742738.HMPREF9460_00851	Helix-turn-helix domain	NA
UHGV-0220186_19	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0220186_19	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0220186_19	Structural annotation	PF04182, NF040939, COG3355	NA	NA
UHGV-0220186_20	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0220186_20	UniRef90	UniRef90_UPI001C01DF91	helix-turn-helix transcriptional regulator	NA
UHGV-0220186_20	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-0220186_20	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0220186_20	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0220186_20	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-0220186_21	Structural annotation	PF12728, NF040990	NA	NA
UHGV-0220186_22	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0220186_22	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0220186_22	UniRef90	UniRef90_UPI00030EB95F	helix-turn-helix domain-containing protein	NA
UHGV-0220186_22	eggNOG-mapper	1007096.BAGW01000011_gene2356	sequence-specific DNA binding	NA
UHGV-0220186_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0220186_22	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0220186_22	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0220186_24	UniRef90	UniRef90_UPI001956EF77	stalk domain-containing protein	NA
UHGV-0220186_24	eggNOG-mapper	693746.OBV_27580	Copper amine oxidase N-terminal domain	NA
UHGV-0220186_24	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-0220186_25	PHROG	phrog_17982	NA	unknown function
UHGV-0220186_25	UniRef90	UniRef90_UPI000C823954	NA	NA
UHGV-0220186_25	eggNOG-mapper	720554.Clocl_1541	NA	NA
UHGV-0220186_25	Pfam	PF14020	NA	DUF4236
UHGV-0220186_25	Structural annotation	PF14020	NA	NA
UHGV-0220186_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0220186_26	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-0220186_26	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-0220186_27	KOfam	K14059	int; integrase	NA
UHGV-0220186_27	PHROG	phrog_1	integrase	integration and excision
UHGV-0220186_27	UniRef90	UniRef90_A0A212JT52	Putative Integrase family protein	NA
UHGV-0220186_27	eggNOG-mapper	693746.OBV_01970	Phage integrase family	NA
UHGV-0220186_27	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0220186_27	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0220186_27	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0220186_28	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0220186_29	Structural annotation	PF12510	NA	NA
UHGV-0220186_30	PHROG	phrog_20016	NA	unknown function
UHGV-0220186_30	UniRef90	UniRef90_A0A2Z4QB67	Carbohydrate binding domain/collagen triple helix repeat protein	NA
UHGV-0220186_30	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0220186_30	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0220186_31	PHROG	phrog_16490	NA	unknown function
UHGV-0220186_31	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0220186_32	PHROG	phrog_22984	NA	unknown function
UHGV-0220186_33	PHROG	phrog_21718	NA	unknown function
UHGV-0220186_33	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0220186_34	PHROG	phrog_3754	NA	unknown function
UHGV-0220186_34	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-0220186_40	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-0220186_41	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0220186_41	PHROG	phrog_894	endolysin	lysis
UHGV-0220186_41	UniRef90	UniRef90_K1TJK4	Peptidase_M15_3 domain-containing protein (Fragment)	NA
UHGV-0220186_41	eggNOG-mapper	1235797.C816_04171	Peptidase M15	NA
UHGV-0220186_41	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0220186_41	COG	COG3108	NA	NA
UHGV-0220186_41	Structural annotation	PF05951, COG3108	NA	NA
UHGV-0220186_42	PHROG	phrog_18955	NA	unknown function
UHGV-0220186_42	UniRef90	UniRef90_UPI00164D2830	phosphodiester glycosidase family protein	NA
UHGV-0220186_42	eggNOG-mapper	1536772.R70723_09625	Exopolysaccharide biosynthesis protein	NA
UHGV-0220186_42	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0220186_42	COG	COG4632	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	NA
UHGV-0220186_42	Structural annotation	PF09992, COG4632	NA	NA
UHGV-0220186_44	PHROG	phrog_13256	NA	unknown function
UHGV-0220186_44	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-0220186_45	PHROG	phrog_4105	NA	unknown function
UHGV-0220186_45	eggNOG-mapper	428125.CLOLEP_01431	NA	NA
UHGV-0220186_46	UniRef90	UniRef90_A0A356L0N0	XkdX family protein	NA
UHGV-0220186_46	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0220186_46	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0220186_48	Structural annotation	PF13620, NF040788, COG2512	NA	NA
UHGV-0220186_49	PHROG	phrog_18725	NA	unknown function
UHGV-0220186_49	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0220186_49	Structural annotation	PF13754, COG2372	NA	NA
UHGV-0220186_50	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-0220186_50	PHROG	phrog_11157	NA	unknown function
UHGV-0220186_50	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-0220186_50	eggNOG-mapper	1256908.HMPREF0373_00674	NA	NA
UHGV-0220186_50	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0220186_50	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0220186_50	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0220186_50	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0220186_52	PHROG	phrog_13879	NA	unknown function
UHGV-0220186_52	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-0220186_52	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-0220186_53	eggNOG-mapper	1235797.C816_02660	NA	NA
UHGV-0220186_53	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0220186_54	KOfam	K10398	KIF11, EG5; kinesin family member 11	NA
UHGV-0220186_54	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0220186_54	UniRef90	UniRef90_A0A1E3BXP9	Phage tail protein	NA
UHGV-0220186_54	eggNOG-mapper	1216932.CM240_0625	tape measure	NA
UHGV-0220186_54	COG	COG5283	Phage-related tail protein	NA
UHGV-0220186_54	Structural annotation	PF20155, MF_04138, COG5280	NA	NA
UHGV-0220186_56	eggNOG-mapper	665950.HMPREF1025_02659	NA	NA
UHGV-0220186_56	Structural annotation	PF11836	NA	NA
UHGV-0220186_57	PHROG	phrog_88	major tail protein	tail
UHGV-0220186_57	UniRef90	UniRef90_UPI0018771F27	phage tail protein	NA
UHGV-0220186_57	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-0220186_57	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0220186_57	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0220186_58	UniRef90	UniRef90_R6UNR2	HK97 gp10 family phage protein	NA
UHGV-0220186_58	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-0220186_58	Structural annotation	TIGR01725	NA	NA
UHGV-0220186_59	eggNOG-mapper	999413.HMPREF1094_02005	NA	NA
UHGV-0220186_59	Structural annotation	PF05657, COG3167	NA	NA
UHGV-0220186_60	PHROG	phrog_19734	NA	unknown function
UHGV-0220186_60	UniRef90	UniRef90_A0A6I7GNS7	Phage head closure protein	NA
UHGV-0220186_60	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-0220186_60	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0220186_61	PHROG	phrog_749	NA	unknown function
UHGV-0220186_61	eggNOG-mapper	86416.Clopa_0342	NA	NA
UHGV-0220186_62	PHROG	phrog_10	major head protein	head and packaging
UHGV-0220186_62	UniRef90	UniRef90_G9YSC0	Cadherin-like domain-containing protein	NA
UHGV-0220186_62	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-0220186_62	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0220186_62	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0220186_62	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0220186_62	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0220186_62	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0220186_63	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0220186_63	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0220186_63	UniRef90	UniRef90_A0A1Y4BT12	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0220186_63	eggNOG-mapper	349161.Dred_2605	Belongs to the peptidase S14 family	NA
UHGV-0220186_63	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0220186_63	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0220186_63	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0220186_64	PHROG	phrog_12	portal protein	head and packaging
UHGV-0220186_64	UniRef90	UniRef90_G9YSB8	Phage portal protein, HK97 family	NA
UHGV-0220186_64	eggNOG-mapper	610130.Closa_0742	Phage portal protein, HK97 family	NA
UHGV-0220186_64	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0220186_64	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0220186_64	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0220186_64	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0220186_65	PHROG	phrog_21498	NA	unknown function
UHGV-0220186_65	UniRef90	UniRef90_F0NXT0	ParB-like nuclease	NA
UHGV-0220186_65	eggNOG-mapper	78346.BRUM_0376	DNA binding	NA
UHGV-0220186_65	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0220186_65	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0220186_66	eggNOG-mapper	349161.Dred_2607	Phage terminase-like protein large subunit	NA
UHGV-0220186_66	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0220186	Yes	38,368 bps	58.22%	100.00%	0.9801
UHGV-1266995	No	38,383 bps	58.22%	100.00%	0.9824
UHGV-0071272	No	38,156 bps	58.47%	99.39%	0.9817
UHGV-1841564	No	16,372 bps	59.19%	42.70%	0.9826