vOTU-005189

Overview

No. of genomes 2

Genome length 30,086 bps

Completeness 100.00% (complete)

Host Veillonella parvula A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005189
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-01617 › vGENUS-03552 › vSUBGEN-02983 › vOTU-005189
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella › Veillonella parvula A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1366087
BioSample	SAMEA2738151
Genome length	30,086 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	40
CDS density	88.08%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1366087_3	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-1366087_5	PHROG	phrog_27828	NA	unknown function
UHGV-1366087_5	UniRef90	UniRef90_F5KZP5	Conserved domain protein	NA
UHGV-1366087_5	eggNOG-mapper	546273.VEIDISOL_00738	NA	NA
UHGV-1366087_6	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1366087_6	PHROG	phrog_435	endolysin	lysis
UHGV-1366087_6	UniRef90	UniRef90_A0A096CMM2	Cell wall hydrolase (Fragment)	NA
UHGV-1366087_6	eggNOG-mapper	1401067.HMPREF0872_07855	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1366087_6	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1366087_6	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1366087_6	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-1366087_7	Structural annotation	PF06531	NA	NA
UHGV-1366087_8	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-1366087_8	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1366087_8	UniRef90	UniRef90_H3KB55	AAA_31 domain-containing protein	NA
UHGV-1366087_8	eggNOG-mapper	1121098.HMPREF1534_01660	CobQ CobB MinD ParA nucleotide binding domain protein	NA
UHGV-1366087_8	Pfam	PF13614	AAA domain	AAA_31
UHGV-1366087_8	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-1366087_8	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-1366087_10	PHROG	phrog_25531	NA	unknown function
UHGV-1366087_10	UniRef90	UniRef90_UPI000565AB75	CHC2 zinc finger domain-containing protein	NA
UHGV-1366087_10	eggNOG-mapper	1487923.DP73_21175	RepB DNA-primase from phage plasmid	NA
UHGV-1366087_10	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-1366087_12	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1366087_12	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-1366087_15	KOfam	K21527	mom; adenine modification enzyme [EC:2.3.1.-]	NA
UHGV-1366087_15	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-1366087_15	eggNOG-mapper	1123318.KB904586_gene454	NA	NA
UHGV-1366087_15	Structural annotation	PF16092, MF_02210, NF000135, COG3818	NA	NA
UHGV-1366087_17	PHROG	phrog_1066	NA	unknown function
UHGV-1366087_17	eggNOG-mapper	1094508.Tsac_2428	NA	NA
UHGV-1366087_17	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-1366087_18	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1366087_18	UniRef90	UniRef90_UPI001959A792	terminase large subunit	NA
UHGV-1366087_18	eggNOG-mapper	1382358.JHVN01000024_gene1704	Phage Terminase	NA
UHGV-1366087_18	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1366087_18	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1366087_18	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1366087_18	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1366087_20	PHROG	phrog_12	portal protein	head and packaging
UHGV-1366087_20	UniRef90	UniRef90_UPI0018C64799	phage portal protein	NA
UHGV-1366087_20	eggNOG-mapper	1094508.Tsac_2426	Portal protein	NA
UHGV-1366087_20	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1366087_20	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1366087_20	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1366087_20	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1366087_21	KOfam	K06904	NA	NA
UHGV-1366087_21	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1366087_21	UniRef90	UniRef90_A0A3C0IZ06	HK97 family phage prohead protease	NA
UHGV-1366087_21	eggNOG-mapper	1235755.ANAM01000006_gene2374	Caudovirus prohead serine protease	NA
UHGV-1366087_21	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1366087_21	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1366087_21	COG	COG3740	Phage head maturation protease	NA
UHGV-1366087_21	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1366087_22	PHROG	phrog_10	major head protein	head and packaging
UHGV-1366087_22	UniRef90	UniRef90_UPI001D01823D	phage major capsid protein	NA
UHGV-1366087_22	eggNOG-mapper	1341151.ASZU01000004_gene260	Phage capsid family	NA
UHGV-1366087_22	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1366087_22	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1366087_22	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1366087_22	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1366087_23	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-1366087_23	UniRef90	UniRef90_A0A2S7ZCT6	Phage gp6-like head-tail connector protein	NA
UHGV-1366087_23	eggNOG-mapper	861450.HMPREF0080_02048	Phage gp6-like head-tail connector protein	NA
UHGV-1366087_23	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1366087_23	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1366087_23	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1366087_24	PHROG	phrog_25	head closure Hc1	connector
UHGV-1366087_24	UniRef90	UniRef90_UPI000366230D	phage head closure protein	NA
UHGV-1366087_24	eggNOG-mapper	1234664.AMRO01000024_gene1811	Phage head-tail joining protein	NA
UHGV-1366087_24	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1366087_24	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1366087_24	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1366087_24	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1366087_25	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1366087_25	UniRef90	UniRef90_UPI0008EBDF4A	HK97 gp10 family phage protein	NA
UHGV-1366087_25	eggNOG-mapper	1232428.CAVO010000003_gene1006	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1366087_25	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1366087_25	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-1366087_26	PHROG	phrog_525	NA	unknown function
UHGV-1366087_26	Pfam	PF20765	NA	DUF6838
UHGV-1366087_26	Structural annotation	PF20765, TIGR01633, COG5003	NA	NA
UHGV-1366087_27	PHROG	phrog_1480	tail sheath	tail
UHGV-1366087_27	UniRef90	UniRef90_A0A848EQH3	Phage tail sheath protein	NA
UHGV-1366087_27	eggNOG-mapper	568816.Acin_1338	Phage tail sheath C-terminal domain	NA
UHGV-1366087_27	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-1366087_27	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-1366087_27	Structural annotation	PF10758, COG3497	NA	NA
UHGV-1366087_28	PHROG	phrog_365	tail protein	tail
UHGV-1366087_28	UniRef90	UniRef90_A0A7Y2PKU1	Phage tail tube protein	NA
UHGV-1366087_28	eggNOG-mapper	1232428.CAVO010000003_gene1003	Phage tail tube protein	NA
UHGV-1366087_28	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-1366087_28	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-1366087_29	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-1366087_29	UniRef90	UniRef90_UPI00101B7B80	XkdN-like protein	NA
UHGV-1366087_29	eggNOG-mapper	1410653.JHVC01000006_gene212	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-1366087_29	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-1366087_29	Structural annotation	PF08890	NA	NA
UHGV-1366087_30	PHROG	phrog_991	tail length tape measure protein	tail
UHGV-1366087_30	UniRef90	UniRef90_A0A8D4UU63	PhageMin_Tail domain-containing protein	NA
UHGV-1366087_30	eggNOG-mapper	1120985.AUMI01000018_gene2905	Phage-related minor tail protein	NA
UHGV-1366087_30	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1366087_30	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1366087_30	COG	COG5283	Phage-related tail protein	NA
UHGV-1366087_30	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1366087_31	PHROG	phrog_5184	NA	unknown function
UHGV-1366087_31	UniRef90	UniRef90_I0GWS0	Phage related protein	NA
UHGV-1366087_31	eggNOG-mapper	1232428.CAVO010000003_gene1000	LysM domain	NA
UHGV-1366087_31	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-1366087_32	PHROG	phrog_400	tail protein	tail
UHGV-1366087_32	UniRef90	UniRef90_I0GWS1	Phage related protein	NA
UHGV-1366087_32	eggNOG-mapper	568816.Acin_1962	NLP P60 protein	NA
UHGV-1366087_32	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-1366087_32	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-1366087_33	PHROG	phrog_579	NA	unknown function
UHGV-1366087_33	UniRef90	UniRef90_UPI000DA5FB9A	NA	NA
UHGV-1366087_33	eggNOG-mapper	883156.HMPREF9282_00963	NA	NA
UHGV-1366087_33	Pfam	PF10844	NA	DUF2577
UHGV-1366087_33	Structural annotation	PF10844	NA	NA
UHGV-1366087_34	PHROG	phrog_120	baseplate protein	tail
UHGV-1366087_34	UniRef90	UniRef90_UPI0018C7CFFA	NA	NA
UHGV-1366087_34	eggNOG-mapper	568816.Acin_1960	NA	NA
UHGV-1366087_34	Pfam	PF10934	NA	DUF2634
UHGV-1366087_34	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-1366087_35	PHROG	phrog_6	baseplate protein	tail
UHGV-1366087_35	UniRef90	UniRef90_A0A269TC61	Baseplate_J domain-containing protein	NA
UHGV-1366087_35	eggNOG-mapper	568816.Acin_1328	Baseplate J-like protein	NA
UHGV-1366087_35	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1366087_35	COG	COG3299	NA	NA
UHGV-1366087_35	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-1366087_36	PHROG	phrog_521	tail protein	tail
UHGV-1366087_36	UniRef90	UniRef90_UPI0018739AB4	NA	NA
UHGV-1366087_36	eggNOG-mapper	1111454.HMPREF1250_0200	NA	NA
UHGV-1366087_36	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-1366087_36	COG	COG3778	NA	NA
UHGV-1366087_36	Structural annotation	PF10076, COG3778	NA	NA
UHGV-1366087_37	PHROG	phrog_7037	tail fiber protein	tail
UHGV-1366087_37	UniRef90	UniRef90_UPI000E4E3E77	phage tail protein	NA
UHGV-1366087_37	eggNOG-mapper	1589751.A0A0C5AEQ0_9CAUD	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-1366087_37	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-1366087_37	Structural annotation	PF12571, COG5301	NA	NA
UHGV-1366087_38	eggNOG-mapper	546273.VEIDISOL_01075	NA	NA
UHGV-1366087_38	Structural annotation	PF17813, NF038186	NA	NA
UHGV-1366087_39	PHROG	phrog_32779	NA	unknown function
UHGV-1366087_39	Pfam	PF17891	Mu-like prophage FluMu N-terminal domain	FluMu_N

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1366087	Yes	30,086 bps	32.67%	100.00%	0.9722
UHGV-0109360	No	28,437 bps	32.94%	100.00%	0.9741