vOTU-005277

Overview

vOTU representative UHGV-1928314

No. of genomes 6

Genome length 42,143 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005277
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vGENUS-00181 › vSUBGEN-41252 › vOTU-005277
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1928314
BioSample	NA
Genome length	42,143 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	73
CDS density	90.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1928314_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1928314_1	PHROG	phrog_95	integrase	integration and excision
UHGV-1928314_1	UniRef90	UniRef90_A0A1C6HT72	Resolvase, N terminal domain	NA
UHGV-1928314_1	eggNOG-mapper	357809.Cphy_2997	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-1928314_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1928314_1	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1928314_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1928314_1	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-1928314_2	UniRef90	UniRef90_A0A8D9UHA6	Helix-turn-helix XRE-family like protein	NA
UHGV-1928314_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1928314_2	Structural annotation	PF12844, MF_00535, TIGR03070, COG1396	NA	NA
UHGV-1928314_5	eggNOG-mapper	1121344.JHZO01000003_gene989	PFAM helix-turn-helix domain protein	NA
UHGV-1928314_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1928314_5	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1928314_5	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1928314_6	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1928314_6	UniRef90	UniRef90_A0A328UFC2	HTH cro/C1-type domain-containing protein	NA
UHGV-1928314_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1928314_6	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-1928314_6	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1928314_8	PHROG	phrog_22529	NA	unknown function
UHGV-1928314_8	UniRef90	UniRef90_A0A8D9UHA1	3D containing protein	NA
UHGV-1928314_8	eggNOG-mapper	658088.HMPREF0987_02675	peptidase	NA
UHGV-1928314_8	Pfam	PF06725	3D domain	3D
UHGV-1928314_8	COG	COG3584	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	NA
UHGV-1928314_8	Structural annotation	COG3584	NA	NA
UHGV-1928314_10	PHROG	phrog_4433	NA	unknown function
UHGV-1928314_10	eggNOG-mapper	106648.BBLJ01000054_gene3814	regulation of DNA-templated transcription, elongation	NA
UHGV-1928314_10	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1928314_10	Structural annotation	NF007410	NA	NA
UHGV-1928314_11	UniRef90	UniRef90_A0A8D9UH91	HTH cro/C1-type domain-containing protein	NA
UHGV-1928314_11	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-1928314_11	Structural annotation	PF01381, PF21715, NF041951, TIGR04176, COG1476, COG1654	NA	NA
UHGV-1928314_13	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1928314_13	UniRef90	UniRef90_A0A8D9PDS3	Resistance protein	NA
UHGV-1928314_13	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-1928314_13	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1928314_13	Structural annotation	PF05565	NA	NA
UHGV-1928314_14	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1928314_14	UniRef90	UniRef90_UPI001C126E67	ERF family protein	NA
UHGV-1928314_14	eggNOG-mapper	559189.B6SBX8_9CAUD	ERF superfamily	NA
UHGV-1928314_14	Pfam	PF04404	ERF superfamily	ERF
UHGV-1928314_14	Structural annotation	PF04404, COG4712	NA	NA
UHGV-1928314_15	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1928314_15	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-1928314_15	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-1928314_15	Structural annotation	PF05772	NA	NA
UHGV-1928314_17	PHROG	phrog_7566	NA	unknown function
UHGV-1928314_17	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-1928314_17	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-1928314_18	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1928314_18	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1928314_18	UniRef90	UniRef90_UPI001958E09C	single-stranded DNA-binding protein	NA
UHGV-1928314_18	eggNOG-mapper	693746.OBV_19910	Single-strand binding protein family	NA
UHGV-1928314_18	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1928314_18	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1928314_18	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1928314_18	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1928314_18	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1928314_20	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1928314_20	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1928314_20	UniRef90	UniRef90_G5SMF8	HNH endonuclease domain protein	NA
UHGV-1928314_20	eggNOG-mapper	762968.HMPREF9441_00533	HNH endonuclease	NA
UHGV-1928314_20	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1928314_20	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1928314_21	PHROG	phrog_15768	NA	unknown function
UHGV-1928314_21	UniRef90	UniRef90_A0A8D9PDU3	NA	NA
UHGV-1928314_21	eggNOG-mapper	445970.ALIPUT_02689	DNA-binding transcription factor activity	NA
UHGV-1928314_21	Pfam	PF19808	NA	DUF6291
UHGV-1928314_21	COG	COG2188	DNA-binding transcriptional regulator, GntR family	NA
UHGV-1928314_21	Structural annotation	PF19808	NA	NA
UHGV-1928314_22	PHROG	phrog_9804	NA	unknown function
UHGV-1928314_22	UniRef90	UniRef90_A0A8D9PDS1	Replisome organizer	NA
UHGV-1928314_22	eggNOG-mapper	903814.ELI_3550	Loader and inhibitor of phage G40P	NA
UHGV-1928314_22	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-1928314_22	Structural annotation	PF11417	NA	NA
UHGV-1928314_24	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1928314_24	UniRef90	UniRef90_A0A8D9PDD6	Endonuclease	NA
UHGV-1928314_24	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-1928314_24	Pfam	PF06356	NA	DUF1064
UHGV-1928314_24	Structural annotation	PF06356	NA	NA
UHGV-1928314_25	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-1928314_25	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1928314_25	UniRef90	UniRef90_A0A8D9PDC5	Adenine specific DNA methyltransferase	NA
UHGV-1928314_25	eggNOG-mapper	981335.G4W934_9CAUD	N-methyltransferase activity	NA
UHGV-1928314_25	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-1928314_25	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1928314_25	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-1928314_27	eggNOG-mapper	1232443.BAIA02000103_gene2903	NA	NA
UHGV-1928314_28	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1928314_28	PHROG	phrog_16427	DNA methyltransferase	other
UHGV-1928314_28	UniRef90	UniRef90_D4K5C7	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1928314_28	eggNOG-mapper	657322.FPR_26610	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1928314_28	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1928314_28	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1928314_30	PHROG	phrog_38832	NA	unknown function
UHGV-1928314_30	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-1928314_31	UniRef90	UniRef90_A0A8D9PDK2	Zinc-ribbon containing domain	NA
UHGV-1928314_33	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1928314_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1928314_33	UniRef90	UniRef90_A0A8D9PDC4	Repressor protein	NA
UHGV-1928314_33	eggNOG-mapper	1226322.HMPREF1545_00039	sequence-specific DNA binding	NA
UHGV-1928314_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1928314_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1928314_33	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1928314_34	UniRef90	UniRef90_A0A8D9PDT2	Brinker DNA-binding domain protein	NA
UHGV-1928314_34	eggNOG-mapper	1226322.HMPREF1545_00042	NA	NA
UHGV-1928314_34	Structural annotation	PF13542	NA	NA
UHGV-1928314_35	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1928314_35	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1928314_35	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-1928314_35	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-1928314_35	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1928314_35	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1928314_35	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1928314_35	COG	COG1783	Phage terminase large subunit	NA
UHGV-1928314_35	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1928314_36	PHROG	phrog_533	portal protein	head and packaging
UHGV-1928314_36	UniRef90	UniRef90_A0A1C5N775	Phage portal protein, putative, A118 family	NA
UHGV-1928314_36	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-1928314_36	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1928314_36	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1928314_38	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1928314_38	UniRef90	UniRef90_UPI001D080D49	phage minor capsid protein	NA
UHGV-1928314_38	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-1928314_38	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1928314_38	COG	COG2369	NA	NA
UHGV-1928314_38	Structural annotation	PF06152	NA	NA
UHGV-1928314_39	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1928314_39	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-1928314_40	PHROG	phrog_10	major head protein	head and packaging
UHGV-1928314_40	UniRef90	UniRef90_A0A2U1BEF2	HK97 family phage major capsid protein	NA
UHGV-1928314_40	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-1928314_40	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1928314_40	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1928314_40	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1928314_40	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1928314_41	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1928314_41	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-1928314_42	PHROG	phrog_3366	NA	unknown function
UHGV-1928314_42	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-1928314_42	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-1928314_43	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1928314_43	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-1928314_43	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-1928314_43	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1928314_43	Structural annotation	PF11114	NA	NA
UHGV-1928314_44	PHROG	phrog_3266	tail completion	connector
UHGV-1928314_44	UniRef90	UniRef90_A0A2Z4QA01	Minor capsid protein	NA
UHGV-1928314_44	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-1928314_44	Structural annotation	PF12691	NA	NA
UHGV-1928314_45	PHROG	phrog_3099	NA	unknown function
UHGV-1928314_45	eggNOG-mapper	1226322.HMPREF1545_00056	NA	NA
UHGV-1928314_45	Structural annotation	TIGR02126	NA	NA
UHGV-1928314_46	PHROG	phrog_11299	NA	unknown function
UHGV-1928314_46	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-1928314_46	Structural annotation	PF10666	NA	NA
UHGV-1928314_47	PHROG	phrog_706	NA	unknown function
UHGV-1928314_47	UniRef90	UniRef90_UPI00164D7633	Gp15 family bacteriophage protein	NA
UHGV-1928314_47	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-1928314_47	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1928314_47	Structural annotation	PF06854	NA	NA
UHGV-1928314_48	KOfam	K07448	mrr; restriction system protein	NA
UHGV-1928314_48	PHROG	phrog_19856	NA	unknown function
UHGV-1928314_48	UniRef90	UniRef90_A0A417P7U8	Restriction endonuclease	NA
UHGV-1928314_48	eggNOG-mapper	1235790.C805_00010	Restriction endonuclease	NA
UHGV-1928314_48	PADLOC	ZorD1_00005	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-1928314_48	Pfam	PF04471	Restriction endonuclease	Mrr_cat
UHGV-1928314_48	COG	COG1787	Endonuclease, HJR/Mrr/RecB family	NA
UHGV-1928314_48	Structural annotation	PF04471, MF_00584, NF040854, COG1787	NA	NA
UHGV-1928314_49	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1928314_49	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-1928314_49	COG	COG1511	NA	NA
UHGV-1928314_49	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-1928314_50	PHROG	phrog_1194	NA	unknown function
UHGV-1928314_50	eggNOG-mapper	1226322.HMPREF1545_00060	NA	NA
UHGV-1928314_50	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1928314_51	PHROG	phrog_13879	NA	unknown function
UHGV-1928314_51	eggNOG-mapper	1226322.HMPREF1545_00061	NA	NA
UHGV-1928314_51	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-1928314_53	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-1928314_53	PHROG	phrog_11157	NA	unknown function
UHGV-1928314_53	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-1928314_53	eggNOG-mapper	1256908.HMPREF0373_00674	NA	NA
UHGV-1928314_53	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-1928314_53	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-1928314_53	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-1928314_53	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-1928314_54	PHROG	phrog_18725	NA	unknown function
UHGV-1928314_54	eggNOG-mapper	1235797.C816_02657	NA	NA
UHGV-1928314_54	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-1928314_54	Structural annotation	PF13754, COG2372	NA	NA
UHGV-1928314_56	PHROG	phrog_2295	NA	unknown function
UHGV-1928314_56	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-1928314_56	Structural annotation	PF21722	NA	NA
UHGV-1928314_57	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-1928314_57	Structural annotation	PF21722	NA	NA
UHGV-1928314_61	PHROG	phrog_2310	NA	unknown function
UHGV-1928314_61	eggNOG-mapper	1151292.QEW_0364	NA	NA
UHGV-1928314_63	PHROG	phrog_4105	NA	unknown function
UHGV-1928314_63	UniRef90	UniRef90_A0A8D9UHA9	Holin protein	NA
UHGV-1928314_63	eggNOG-mapper	411460.RUMTOR_01326	NA	NA
UHGV-1928314_64	PHROG	phrog_1129	holin	lysis
UHGV-1928314_64	UniRef90	UniRef90_A0A8D9PDD4	Holin	NA
UHGV-1928314_64	eggNOG-mapper	1007096.BAGW01000035_gene1305	NA	NA
UHGV-1928314_64	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1928314_64	Structural annotation	PF06946	NA	NA
UHGV-1928314_65	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1928314_65	PHROG	phrog_435	endolysin	lysis
UHGV-1928314_65	UniRef90	UniRef90_A0A8D9PDS4	Cell wall hydrolase/autolysin	NA
UHGV-1928314_65	eggNOG-mapper	1226322.HMPREF1545_01953	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1928314_65	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1928314_65	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1928314_65	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-1928314_67	PHROG	phrog_3754	NA	unknown function
UHGV-1928314_67	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-1928314_68	PHROG	phrog_21718	NA	unknown function
UHGV-1928314_68	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1928314_69	PHROG	phrog_22984	NA	unknown function
UHGV-1928314_70	PHROG	phrog_16490	NA	unknown function
UHGV-1928314_70	eggNOG-mapper	658655.HMPREF0988_00917	NA	NA
UHGV-1928314_71	PHROG	phrog_20016	NA	unknown function
UHGV-1928314_71	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1928314_71	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1928314_71	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1928314_72	PHROG	phrog_28802	NA	unknown function
UHGV-1928314_72	Structural annotation	PF12510	NA	NA
UHGV-1928314_73	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1928314	Yes	42,143 bps	53.92%	100.00%	0.9822
UHGV-0205540	No	42,008 bps	53.85%	100.00%	0.9829
UHGV-1386150	No	42,257 bps	53.97%	99.21%	0.9828
UHGV-1391152	No	42,254 bps	53.97%	99.20%	0.9825
UHGV-1406811	No	37,172 bps	54.66%	87.26%	0.9829
UHGV-2223126	No	33,399 bps	53.07%	78.38%	0.9815