vOTU-005294

Overview

vOTU representative UHGV-1903376

No. of genomes 27

Genome length 51,154 bps

Completeness 100.00% (complete)

Host Oliverpabstia

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005294
Number of genomes	27
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00027 › vSUBFAM-00190 › vGENUS-02270 › vSUBGEN-01425 › vOTU-005294
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Oliverpabstia
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1903376
BioSample	NA
Genome length	51,154 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	77
CDS density	91.95%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1903376_5	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1903376_5	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1903376_5	UniRef90	UniRef90_A0A349YI29	PBSX family phage terminase large subunit	NA
UHGV-1903376_5	eggNOG-mapper	1443122.Z958_p0035	Phage terminase, large subunit, PBSX family	NA
UHGV-1903376_5	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1903376_5	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1903376_5	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1903376_5	COG	COG1783	Phage terminase large subunit	NA
UHGV-1903376_5	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1903376_7	PHROG	phrog_24267	NA	unknown function
UHGV-1903376_7	UniRef90	UniRef90_A0A099I3H7	Pilus assembly protein (Fragment)	NA
UHGV-1903376_7	eggNOG-mapper	411490.ANACAC_00723	the current gene model (or a revised gene model) may contain a frame shift	NA
UHGV-1903376_7	COG	COG4675	Phage tail collar domain	NA
UHGV-1903376_8	Structural annotation	PF19714	NA	NA
UHGV-1903376_9	eggNOG-mapper	1232452.BAIB02000007_gene1610	NA	NA
UHGV-1903376_9	Structural annotation	PF10651, PF20328	NA	NA
UHGV-1903376_12	PHROG	phrog_443	holin	lysis
UHGV-1903376_12	UniRef90	UniRef90_UPI000C75746C	holin	NA
UHGV-1903376_12	eggNOG-mapper	626523.GCWU000342_01012	Putative lactococcus lactis phage r1t holin	NA
UHGV-1903376_12	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1903376_12	Structural annotation	PF16945	NA	NA
UHGV-1903376_13	PHROG	phrog_20388	endolysin	lysis
UHGV-1903376_13	UniRef90	UniRef90_A0A3A9FAE9	CHAP domain-containing protein	NA
UHGV-1903376_13	eggNOG-mapper	610130.Closa_1415	Peptidoglycan-binding domain 1 protein	NA
UHGV-1903376_13	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1903376_13	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1903376_13	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-1903376_13	Structural annotation	PF18013, PF01471, COG3409	NA	NA
UHGV-1903376_14	PHROG	phrog_64	portal protein	head and packaging
UHGV-1903376_14	UniRef90	UniRef90_A0A843JBG3	Phage portal protein	NA
UHGV-1903376_14	eggNOG-mapper	871584.D9ZNC8_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1903376_14	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1903376_16	PHROG	phrog_1657	head morphogenesis	head and packaging
UHGV-1903376_16	UniRef90	UniRef90_A0A1C6BCQ4	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-1903376_16	eggNOG-mapper	1121342.AUCO01000012_gene1699	NA	NA
UHGV-1903376_19	Structural annotation	MF_02110	NA	NA
UHGV-1903376_20	PHROG	phrog_909	major head protein	head and packaging
UHGV-1903376_20	UniRef90	UniRef90_UPI001CF15A5E	head decoration protein	NA
UHGV-1903376_20	eggNOG-mapper	1158612.I580_01911	NA	NA
UHGV-1903376_20	Structural annotation	PF02924	NA	NA
UHGV-1903376_21	PHROG	phrog_29	major head protein	head and packaging
UHGV-1903376_21	UniRef90	UniRef90_UPI00082C04A5	major capsid protein	NA
UHGV-1903376_21	eggNOG-mapper	1158612.I580_01912	Phage major capsid protein E	NA
UHGV-1903376_21	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-1903376_21	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-1903376_22	Structural annotation	PF07498	NA	NA
UHGV-1903376_23	PHROG	phrog_4020	NA	unknown function
UHGV-1903376_23	eggNOG-mapper	445335.CBN_3083	NA	NA
UHGV-1903376_24	PHROG	phrog_8435	NA	unknown function
UHGV-1903376_24	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1903376_25	eggNOG-mapper	1443125.Z962_p0058	NA	NA
UHGV-1903376_25	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1903376_25	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-1903376_26	PHROG	phrog_7585	NA	unknown function
UHGV-1903376_26	eggNOG-mapper	748727.CLJU_c31260	NA	NA
UHGV-1903376_26	Structural annotation	PF05657, COG5003	NA	NA
UHGV-1903376_27	PHROG	phrog_6686	tail tube protein	tail
UHGV-1903376_27	UniRef90	UniRef90_A0A3R6E592	S-l_SbsC_C domain-containing protein	NA
UHGV-1903376_27	eggNOG-mapper	748727.CLJU_c31250	NA	NA
UHGV-1903376_27	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1903376_28	PHROG	phrog_6280	NA	unknown function
UHGV-1903376_28	UniRef90	UniRef90_A0A845LLP6	Esterase	NA
UHGV-1903376_28	eggNOG-mapper	1443125.Z962_12410	NA	NA
UHGV-1903376_29	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1903376_29	UniRef90	UniRef90_A0A351TJS6	Phage tail tape measure protein	NA
UHGV-1903376_29	eggNOG-mapper	1410670.JHXF01000015_gene2302	Phage tail tape measure protein, TP901 family	NA
UHGV-1903376_29	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1903376_29	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1903376_29	COG	COG5283	Phage-related tail protein	NA
UHGV-1903376_29	Structural annotation	PF10145, TIGR01760, COG3941	NA	NA
UHGV-1903376_30	PHROG	phrog_36410	NA	unknown function
UHGV-1903376_30	UniRef90	UniRef90_A0A6N3FT50	Phage tail protein	NA
UHGV-1903376_30	eggNOG-mapper	649747.HMPREF0083_00649	Phage tail protein	NA
UHGV-1903376_30	COG	COG4722	Phage-related protein YomH	NA
UHGV-1903376_30	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-1903376_31	PHROG	phrog_538	minor tail protein	tail
UHGV-1903376_31	UniRef90	UniRef90_A0A843GTT7	Siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1903376_31	eggNOG-mapper	536232.CLM_2921	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-1903376_31	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1903376_32	PHROG	phrog_1220	head protein	head and packaging
UHGV-1903376_32	eggNOG-mapper	1211817.CCAT010000079_gene1381	COG NOG18825 non supervised orthologous group	NA
UHGV-1903376_32	Structural annotation	PF20747	NA	NA
UHGV-1903376_34	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1903376_34	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1903376_34	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1903376_34	Structural annotation	PF04545, MF_00674, NF008895, COG2739	NA	NA
UHGV-1903376_39	Structural annotation	PF06003, MF_01077, NF037951, COG1862	NA	NA
UHGV-1903376_41	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-1903376_41	PHROG	phrog_47	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1903376_41	UniRef90	UniRef90_A0A843GN62	Toprim domain-containing protein	NA
UHGV-1903376_41	eggNOG-mapper	1292035.H476_1082	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	NA
UHGV-1903376_41	PADLOC	drt-UG29	DRT	DRT
UHGV-1903376_41	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-1903376_41	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-1903376_41	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-1903376_41	Structural annotation	PF01807, PF13155, MF_00974, TIGR01391, COG0358	NA	NA
UHGV-1903376_43	Structural annotation	PF08804	NA	NA
UHGV-1903376_44	KOfam	K02337	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	NA
UHGV-1903376_44	PHROG	phrog_405	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1903376_44	UniRef90	UniRef90_A0A843GPT9	DNA-directed DNA polymerase	NA
UHGV-1903376_44	eggNOG-mapper	224324.aq_1008	TIGRFAM DNA polymerase III, alpha subunit	NA
UHGV-1903376_44	Pfam	PF02811	PHP domain	PHP
UHGV-1903376_44	Pfam	PF07733	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
UHGV-1903376_44	Pfam	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
UHGV-1903376_44	Pfam	PF14579	Helix-hairpin-helix motif	HHH_6
UHGV-1903376_44	NCBIFam	TIGR00594.1	DNA polymerase III subunit alpha	NA
UHGV-1903376_44	COG	COG0587	DNA polymerase III, alpha subunit	NA
UHGV-1903376_44	Structural annotation	PF07733, PF02811, PF17657, PF14579, MF_01902, TIGR00594, COG0587	NA	NA
UHGV-1903376_45	PHROG	phrog_236	nucleotide kinase	other
UHGV-1903376_45	UniRef90	UniRef90_UPI001629716A	NA	NA
UHGV-1903376_45	eggNOG-mapper	1123263.AUKY01000015_gene1590	NA	NA
UHGV-1903376_45	Pfam	PF11753	NA	DUF3310
UHGV-1903376_46	KOfam	K03553	recA; recombination protein RecA	NA
UHGV-1903376_46	PHROG	phrog_32482	PhoH-like phosphate starvation-inducible	other
UHGV-1903376_46	UniRef90	UniRef90_A0A843GSV7	RECA_3 domain-containing protein	NA
UHGV-1903376_46	eggNOG-mapper	272633.26454099	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	NA
UHGV-1903376_46	Pfam	PF08423	Rad51	Rad51
UHGV-1903376_46	Pfam	PF00154	recA bacterial DNA recombination protein	RecA
UHGV-1903376_46	COG	COG0468	RecA/RadA recombinase	NA
UHGV-1903376_47	Structural annotation	PF01775, MF_00273, NF010188, COG2157	NA	NA
UHGV-1903376_48	PHROG	phrog_2506	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1903376_48	UniRef90	UniRef90_A0A5D3IBF8	PDDEXK_1 domain-containing protein	NA
UHGV-1903376_48	eggNOG-mapper	1499968.TCA2_4616	DNA catabolic process, exonucleolytic	NA
UHGV-1903376_48	COG	COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	NA
UHGV-1903376_48	Structural annotation	PF01930, MF_03030, TIGR00372, COG5377	NA	NA
UHGV-1903376_49	eggNOG-mapper	665950.HMPREF1025_02540	NA	NA
UHGV-1903376_52	Structural annotation	PF18358	NA	NA
UHGV-1903376_53	PHROG	phrog_159	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1903376_53	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-1903376_54	PHROG	phrog_1909	NA	unknown function
UHGV-1903376_54	eggNOG-mapper	1458697.W6E8E8_9CAUD	NA	NA
UHGV-1903376_55	KOfam	K09882	cobS; cobaltochelatase CobS [EC:6.6.1.2]	NA
UHGV-1903376_55	PHROG	phrog_249	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UHGV-1903376_55	UniRef90	UniRef90_G2ZIS3	AAA_5 domain-containing protein	NA
UHGV-1903376_55	eggNOG-mapper	1048830.GUU_04164	AAA domain (dynein-related subfamily)	NA
UHGV-1903376_55	Pfam	PF07728	AAA domain (dynein-related subfamily)	AAA_5
UHGV-1903376_55	COG	COG0714	MoxR-like ATPase	NA
UHGV-1903376_55	Structural annotation	PF07728, MF_00016, TIGR01650, COG0714	NA	NA
UHGV-1903376_59	PHROG	phrog_6466	DNA ligase	DNA, RNA and nucleotide metabolism
UHGV-1903376_59	UniRef90	UniRef90_A0A843GQD5	DNA_ligase_aden domain-containing protein	NA
UHGV-1903376_59	eggNOG-mapper	691965.D4P7L3_9CAUD	helicase activity	NA
UHGV-1903376_62	PHROG	phrog_2002	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1903376_62	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-1903376_63	Structural annotation	PF21138, NF009630, COG2375	NA	NA
UHGV-1903376_67	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-1903376_67	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-1903376_67	UniRef90	UniRef90_A0A1M5KFY9	Ribonuclease H	NA
UHGV-1903376_67	eggNOG-mapper	1291050.JAGE01000002_gene3473	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	NA
UHGV-1903376_67	Pfam	PF00075	RNase H	RNase_H
UHGV-1903376_67	COG	COG0328	Ribonuclease HI	NA
UHGV-1903376_67	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-1903376_68	Structural annotation	PF14084	NA	NA
UHGV-1903376_70	PHROG	phrog_2412	NA	unknown function
UHGV-1903376_70	eggNOG-mapper	226185.EF_2113	Stress-induced bacterial acidophilic repeat motif	NA
UHGV-1903376_72	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1903376_72	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1903376_72	UniRef90	UniRef90_A0A2P1CCG3	Adenine-specific methyltransferase	NA
UHGV-1903376_72	eggNOG-mapper	1399942.U3PCR3_9CAUD	helicase activity	NA
UHGV-1903376_72	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1903376_72	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1903376_72	Structural annotation	PF02195, TIGR00180, COG5119	NA	NA
UHGV-1903376_73	PHROG	phrog_842	beta-glucosyl-HMC-alpha-glucosyltransferase	other
UHGV-1903376_73	UniRef90	UniRef90_A0A516LJ12	Putative beta-glucosyl-HMC-alpha-glucosyl-transferase	NA
UHGV-1903376_73	eggNOG-mapper	508419.F8J156_9CAUD	NA	NA
UHGV-1903376_73	Pfam	PF20691	TET-Associated Glycosyltransferase	TAGT
UHGV-1903376_73	Structural annotation	PF20691, NF041865, COG1216	NA	NA
UHGV-1903376_76	PHROG	phrog_22292	NA	unknown function

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1903376	Yes	51,154 bps	33.84%	100.00%	0.9795
UHGV-0081878	No	42,869 bps	34.00%	100.00%	0.9799
UHGV-1457701	No	51,933 bps	33.96%	99.90%	0.9799
UHGV-0092005	No	51,084 bps	33.84%	99.90%	0.9789
UHGV-1392026	No	47,299 bps	33.87%	94.52%	0.9786
UHGV-2110525	No	44,831 bps	34.07%	89.19%	0.9796
UHGV-1456166	No	42,971 bps	33.98%	85.76%	0.9792
UHGV-0088924	No	37,058 bps	34.28%	74.08%	0.9797
UHGV-1400698	No	32,668 bps	34.25%	64.99%	0.9793
UHGV-0308796	No	30,878 bps	34.13%	61.54%	0.9803
UHGV-0071388	No	30,802 bps	34.18%	61.39%	0.9798
UHGV-1469559	No	30,794 bps	34.17%	61.37%	0.9797
UHGV-1408361	No	27,124 bps	34.64%	54.01%	0.9794
UHGV-0207396	No	23,083 bps	34.82%	45.85%	0.9810
UHGV-1791878	No	21,009 bps	34.88%	41.91%	0.9799
UHGV-1667363	No	18,433 bps	33.00%	37.32%	0.9777
UHGV-0186069	No	18,349 bps	33.10%	37.20%	0.9786
UHGV-0241915	No	18,521 bps	33.07%	36.75%	0.9778
UHGV-0071386	No	16,587 bps	33.38%	33.61%	0.9768
UHGV-1608343	No	16,492 bps	33.37%	33.42%	0.9769
UHGV-1771386	No	15,607 bps	32.93%	31.22%	0.9755
UHGV-0094375	No	14,913 bps	33.13%	29.61%	0.9771
UHGV-0087086	No	11,699 bps	33.45%	23.43%	0.9781
UHGV-0263135	No	10,992 bps	33.61%	21.80%	0.9757
UHGV-1723403	No	10,309 bps	32.48%	20.79%	0.9759
UHGV-1553365	No	10,182 bps	33.45%	20.69%	0.9776
UHGV-1545560	No	10,278 bps	33.17%	20.12%	0.9749