vOTU-005536

Overview

vOTU representative UHGV-0022098

No. of genomes 4

Genome length 40,376 bps

Completeness 100.00% (complete)

Host Evtepia sp004556345

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005536
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 › vSUBFAM-00731 › vGENUS-00601 › vSUBGEN-04758 › vOTU-005536
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Evtepia › Evtepia sp004556345
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0022098
BioSample	SAMEA4766240
Genome length	40,376 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	53
CDS density	89.89%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0022098_1	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-0022098_1	PHROG	phrog_819	tail protein	tail
UHGV-0022098_1	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0022098_4	UniRef90	UniRef90_A0A1Y3RJS2	Sigma70_r4_2 domain-containing protein	NA
UHGV-0022098_8	PHROG	phrog_21483	NA	unknown function
UHGV-0022098_8	eggNOG-mapper	693746.OBV_01600	NA	NA
UHGV-0022098_9	UniRef90	UniRef90_A0A318L9Z0	MuF_C domain-containing protein	NA
UHGV-0022098_9	eggNOG-mapper	1408437.JNJN01000060_gene452	heme binding	NA
UHGV-0022098_9	Pfam	PF18798	Large polyvalent protein-associated domain 3	LPD3
UHGV-0022098_9	COG	COG0503	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	NA
UHGV-0022098_11	PHROG	phrog_6721	NA	unknown function
UHGV-0022098_11	eggNOG-mapper	665950.HMPREF1025_01974	NA	NA
UHGV-0022098_11	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0022098_12	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0022098_12	UniRef90	UniRef90_UPI0019572D92	NA	NA
UHGV-0022098_12	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-0022098_12	Pfam	PF14359	NA	DUF4406
UHGV-0022098_12	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0022098_13	PHROG	phrog_474	phosphofructokinase	other
UHGV-0022098_13	eggNOG-mapper	428125.CLOLEP_01367	NA	NA
UHGV-0022098_13	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0022098_13	Pfam	PF19905	NA	DUF6378
UHGV-0022098_13	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0022098_14	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0022098_14	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0022098_14	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0022098_14	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0022098_15	PHROG	phrog_22543	NA	unknown function
UHGV-0022098_16	PHROG	phrog_7839	NA	unknown function
UHGV-0022098_16	eggNOG-mapper	665956.HMPREF1032_03091	NA	NA
UHGV-0022098_16	Structural annotation	PF08860	NA	NA
UHGV-0022098_17	PHROG	phrog_419	NA	unknown function
UHGV-0022098_17	UniRef90	UniRef90_A6MAI4	Gp119	NA
UHGV-0022098_17	eggNOG-mapper	768486.EHR_02665	NA	NA
UHGV-0022098_17	Structural annotation	PF14083	NA	NA
UHGV-0022098_18	KOfam	K01494	dcd; dCTP deaminase [EC:3.5.4.13]	NA
UHGV-0022098_18	PHROG	phrog_1663	dCTP deaminase	DNA, RNA and nucleotide metabolism
UHGV-0022098_18	UniRef90	UniRef90_A0A3L7P3W4	dCTP deaminase, dUMP-forming	NA
UHGV-0022098_18	eggNOG-mapper	1121335.Clst_0069	TIGRFAM deoxycytidine triphosphate deaminase	NA
UHGV-0022098_18	Pfam	PF06559	2'-deoxycytidine 5'-triphosphate deaminase (DCD)	DCD
UHGV-0022098_18	NCBIFam	TIGR02274.1	dCTP deaminase	NA
UHGV-0022098_18	COG	COG0717	dCTP deaminase	NA
UHGV-0022098_18	HAMAP	MF_00146	dCTP deaminase, dUMP-forming [dcd]	NA
UHGV-0022098_18	Structural annotation	PF06559, MF_00146, TIGR02274, COG0717	NA	NA
UHGV-0022098_19	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0022098_19	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0022098_19	UniRef90	UniRef90_UPI0018ABA1B6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0022098_19	eggNOG-mapper	796940.HMPREF9628_00163	Endodeoxyribonuclease RusA	NA
UHGV-0022098_19	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0022098_19	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0022098_19	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0022098_20	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0022098_20	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0022098_20	UniRef90	UniRef90_A0A845R4R0	DNA helicase	NA
UHGV-0022098_20	eggNOG-mapper	742738.HMPREF9460_00852	Participates in initiation and elongation during chromosome replication	NA
UHGV-0022098_20	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0022098_20	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0022098_20	COG	COG0305	Replicative DNA helicase	NA
UHGV-0022098_20	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0022098_21	PHROG	phrog_15768	NA	unknown function
UHGV-0022098_21	UniRef90	UniRef90_UPI0002D17810	helix-turn-helix domain-containing protein	NA
UHGV-0022098_21	eggNOG-mapper	658086.HMPREF0994_02124	NA	NA
UHGV-0022098_21	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0022098_21	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0022098_21	Structural annotation	PF04492, MF_01819, NF040939, COG3355	NA	NA
UHGV-0022098_23	eggNOG-mapper	903814.ELI_1274	NA	NA
UHGV-0022098_23	Structural annotation	PF05037	NA	NA
UHGV-0022098_25	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0022098_25	UniRef90	UniRef90_A0A8J6P193	AAA family ATPase	NA
UHGV-0022098_25	eggNOG-mapper	1449050.JNLE01000005_gene3946	AAA domain	NA
UHGV-0022098_25	Pfam	PF13479	AAA domain	AAA_24
UHGV-0022098_25	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0022098_28	Structural annotation	PF19157	NA	NA
UHGV-0022098_31	PHROG	phrog_14556	NA	unknown function
UHGV-0022098_31	eggNOG-mapper	203119.Cthe_2752	Metallo-beta-lactamase domain protein	NA
UHGV-0022098_31	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-0022098_32	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0022098_32	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0022098_32	UniRef90	UniRef90_A0A6N2R468	Bro-N domain-containing protein	NA
UHGV-0022098_32	eggNOG-mapper	1321372.AQQB01000018_gene339	BRO family, N-terminal domain	NA
UHGV-0022098_32	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0022098_32	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0022098_32	COG	COG3617	Prophage antirepressor	NA
UHGV-0022098_32	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0022098_33	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0022098_33	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0022098_33	UniRef90	UniRef90_A0A7X5ITH0	XRE family transcriptional regulator	NA
UHGV-0022098_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0022098_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0022098_33	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0022098_34	KOfam	K14059	int; integrase	NA
UHGV-0022098_34	PHROG	phrog_1	integrase	integration and excision
UHGV-0022098_34	UniRef90	UniRef90_UPI00082B31A6	tyrosine-type recombinase/integrase	NA
UHGV-0022098_34	eggNOG-mapper	1507.HMPREF0262_00307	Phage integrase family	NA
UHGV-0022098_34	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0022098_34	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0022098_34	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0022098_35	eggNOG-mapper	1203606.HMPREF1526_02295	CRISPR-associated protein Cse2 (CRISPR_cse2)	NA
UHGV-0022098_42	Structural annotation	PF16677	NA	NA
UHGV-0022098_43	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0022098_43	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-0022098_43	UniRef90	UniRef90_A0A1M5YHQ5	Phage terminase large subunit	NA
UHGV-0022098_43	eggNOG-mapper	693746.OBV_01690	phage Terminase large subunit	NA
UHGV-0022098_43	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0022098_43	COG	COG1783	Phage terminase large subunit	NA
UHGV-0022098_43	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0022098_45	PHROG	phrog_156	portal protein	head and packaging
UHGV-0022098_45	eggNOG-mapper	693746.OBV_01670	NA	NA
UHGV-0022098_45	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0022098_46	PHROG	phrog_4105	NA	unknown function
UHGV-0022098_47	PHROG	phrog_443	holin	lysis
UHGV-0022098_47	UniRef90	UniRef90_R6MWB0	Conserved domain protein	NA
UHGV-0022098_47	eggNOG-mapper	411490.ANACAC_00704	Putative lactococcus lactis phage r1t holin	NA
UHGV-0022098_47	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0022098_47	Structural annotation	PF16945	NA	NA
UHGV-0022098_48	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0022098_48	PHROG	phrog_7698	endolysin	lysis
UHGV-0022098_48	UniRef90	UniRef90_R5HQL6	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0022098_48	eggNOG-mapper	1226322.HMPREF1545_04024	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0022098_48	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0022098_48	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0022098_48	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0022098_49	PHROG	phrog_14606	NA	unknown function
UHGV-0022098_50	PHROG	phrog_422	major head protein	head and packaging
UHGV-0022098_50	UniRef90	UniRef90_A0A8J6JH37	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA
UHGV-0022098_50	eggNOG-mapper	755731.Clo1100_2434	NA	NA
UHGV-0022098_50	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0022098_51	eggNOG-mapper	1519439.JPJG01000011_gene57	NA	NA
UHGV-0022098_51	Structural annotation	PF11650	NA	NA
UHGV-0022098_52	UniRef90	UniRef90_A0A4D7ASB8	NA	NA
UHGV-0022098_52	eggNOG-mapper	693746.OBV_01680	NA	NA
UHGV-0022098_52	Structural annotation	PF11134, MF_03027, NF010237, TIGR03511, COG2319	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0022098	Yes	40,376 bps	53.38%	100.00%	0.9760
UHGV-0016435	No	40,376 bps	53.38%	100.00%	0.9781
UHGV-0027797	No	40,238 bps	53.37%	97.48%	0.9756
UHGV-0021251	No	40,236 bps	53.38%	97.48%	0.9727