vOTU-005593

Overview

vOTU representative UHGV-2007258

No. of genomes 8

Genome length 40,144 bps

Completeness 100.00% (complete)

Host Intestinibacter

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005593
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 › vSUBFAM-00274 › vGENUS-03331 › vSUBGEN-05467 › vOTU-005593
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Intestinibacter
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2007258
BioSample	SAMEA2580133
Genome length	40,144 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	56
CDS density	90.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2007258_1	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-2007258_1	UniRef90	UniRef90_UPI0018AA7BAA	SH3 domain-containing protein	NA
UHGV-2007258_1	eggNOG-mapper	999411.HMPREF1092_01800	Ami_3	NA
UHGV-2007258_1	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-2007258_1	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-2007258_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2007258_2	eggNOG-mapper	349123.Lreu23DRAFT_3172	NA	NA
UHGV-2007258_2	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2007258_3	UniRef90	UniRef90_A0A542AKB6	Anaerobic ribonucleoside-triphosphate reductase-like protein	NA
UHGV-2007258_3	eggNOG-mapper	658659.HMPREF0983_03013	Anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-2007258_3	Pfam	PF13597	Anaerobic ribonucleoside-triphosphate reductase	NRDD
UHGV-2007258_3	COG	COG1328	Anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-2007258_4	PHROG	phrog_1863	NA	unknown function
UHGV-2007258_4	UniRef90	UniRef90_A0A8D9UH94	Hemolysin	NA
UHGV-2007258_4	eggNOG-mapper	1232449.BAHV02000017_gene1511	NA	NA
UHGV-2007258_5	PHROG	phrog_1129	holin	lysis
UHGV-2007258_5	UniRef90	UniRef90_A0A0B3VH17	Holin	NA
UHGV-2007258_5	eggNOG-mapper	702450.CUW_2556	Phage holin family Hol44, in holin superfamily V	NA
UHGV-2007258_5	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-2007258_5	Structural annotation	PF06946	NA	NA
UHGV-2007258_6	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2007258_6	PHROG	phrog_9611	endolysin	lysis
UHGV-2007258_6	UniRef90	UniRef90_UPI001106EB99	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2007258_6	eggNOG-mapper	445973.CLOBAR_02328	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-2007258_6	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2007258_6	Pfam	PF19087	NA	DUF5776
UHGV-2007258_6	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-2007258_6	Structural annotation	PF01510, PF19087, MF_04111, NF008758, NF041850, COG5632	NA	NA
UHGV-2007258_8	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-2007258_8	UniRef90	UniRef90_A0A6N3BIG7	Bro-N domain-containing protein	NA
UHGV-2007258_8	eggNOG-mapper	1151292.QEW_2476	BRO family, N-terminal domain	NA
UHGV-2007258_8	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-2007258_8	COG	COG3617	Prophage antirepressor	NA
UHGV-2007258_8	Structural annotation	PF02498, TIGR02681, COG3617	NA	NA
UHGV-2007258_9	Pfam	PF09274	ParG	ParG
UHGV-2007258_10	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2007258_10	PHROG	phrog_95	integrase	integration and excision
UHGV-2007258_10	UniRef90	UniRef90_UPI001D16F150	recombinase family protein	NA
UHGV-2007258_10	eggNOG-mapper	1151292.QEW_2304	resolvase	NA
UHGV-2007258_10	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2007258_10	Pfam	PF07508	Recombinase	Recombinase
UHGV-2007258_10	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2007258_10	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-2007258_13	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2007258_13	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2007258_13	UniRef90	UniRef90_UPI001A9A9916	helix-turn-helix transcriptional regulator	NA
UHGV-2007258_13	eggNOG-mapper	521460.Athe_2436	sequence-specific DNA binding	NA
UHGV-2007258_13	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2007258_13	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2007258_13	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-2007258_14	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2007258_14	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2007258_14	UniRef90	UniRef90_A0A1C6H7R4	Helix-turn-helix domain	NA
UHGV-2007258_14	eggNOG-mapper	1487921.DP68_08675	NA	NA
UHGV-2007258_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2007258_14	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2007258_15	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2007258_15	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-2007258_15	UniRef90	UniRef90_UPI0011059D32	phage antirepressor	NA
UHGV-2007258_15	eggNOG-mapper	1444310.JANV01000004_gene2690	Phage antirepressor protein KilAC domain	NA
UHGV-2007258_15	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-2007258_15	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2007258_15	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-2007258_15	Structural annotation	PF09669, PF03374, TIGR02681, COG3646	NA	NA
UHGV-2007258_17	Structural annotation	PF12092	NA	NA
UHGV-2007258_20	Structural annotation	PF01765	NA	NA
UHGV-2007258_22	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2007258_22	UniRef90	UniRef90_UPI0018A93168	ERF family protein	NA
UHGV-2007258_22	eggNOG-mapper	929506.CbC4_1193	ERF superfamily	NA
UHGV-2007258_22	Pfam	PF04404	ERF superfamily	ERF
UHGV-2007258_22	Structural annotation	PF04404, TIGR00607, COG5055	NA	NA
UHGV-2007258_23	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2007258_23	UniRef90	UniRef90_UPI00100B530B	NUMOD4 motif-containing HNH endonuclease	NA
UHGV-2007258_23	eggNOG-mapper	146269.A8YQN4_9CAUD	HNH endonuclease	NA
UHGV-2007258_23	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-2007258_23	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-2007258_23	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-2007258_23	Structural annotation	PF20987	NA	NA
UHGV-2007258_24	PHROG	phrog_582	Arc-like repressor	transcription regulation
UHGV-2007258_24	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-2007258_24	Structural annotation	PF07878, TIGR04563, COG4877	NA	NA
UHGV-2007258_25	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2007258_25	UniRef90	UniRef90_UPI00068AA660	helix-turn-helix domain-containing protein	NA
UHGV-2007258_25	eggNOG-mapper	1408823.AXUS01000025_gene2662	DNA-binding transcription factor activity	NA
UHGV-2007258_25	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-2007258_25	COG	COG0640	DNA-binding transcriptional regulator, ArsR family	NA
UHGV-2007258_25	Structural annotation	PF13730, MF_01909, NF040939, COG1846	NA	NA
UHGV-2007258_26	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2007258_26	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-2007258_26	UniRef90	UniRef90_A0A5P3XF33	DNA helicase	NA
UHGV-2007258_26	eggNOG-mapper	272563.CD630_06260	DnaB-like helicase N terminal domain	NA
UHGV-2007258_26	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-2007258_26	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2007258_26	COG	COG0305	Replicative DNA helicase	NA
UHGV-2007258_26	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-2007258_28	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2007258_28	UniRef90	UniRef90_A0A1C5YZ22	HTH_Tnp_Tc3_1 domain-containing protein	NA
UHGV-2007258_28	eggNOG-mapper	423476.A3F671_9CAUD	HNH endonuclease	NA
UHGV-2007258_28	Structural annotation	PF02796, TIGR04381, COG2771	NA	NA
UHGV-2007258_29	Structural annotation	PF09889	NA	NA
UHGV-2007258_30	PHROG	phrog_824	NA	unknown function
UHGV-2007258_30	UniRef90	UniRef90_UPI0018AC7469	VRR-NUC domain-containing protein	NA
UHGV-2007258_30	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-2007258_30	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2007258_30	Structural annotation	PF08774	NA	NA
UHGV-2007258_31	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-2007258_31	PHROG	phrog_351	RNA polymerase sigma factor	transcription regulation
UHGV-2007258_31	UniRef90	UniRef90_UPI0018AAB98E	sigma-70 family RNA polymerase sigma factor	NA
UHGV-2007258_31	eggNOG-mapper	1120746.CCNL01000010_gene1166	Sigma-70 region 2	NA
UHGV-2007258_31	Pfam	PF04542	Sigma-70 region 2	Sigma70_r2
UHGV-2007258_31	NCBIFam	TIGR02937.1	sigma-70 family RNA polymerase sigma factor	NA
UHGV-2007258_31	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2007258_34	eggNOG-mapper	397291.C804_00947	NA	NA
UHGV-2007258_35	KOfam	K03465	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	NA
UHGV-2007258_35	PHROG	phrog_85	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-2007258_35	UniRef90	UniRef90_UPI0018AA0C72	FAD-dependent thymidylate synthase	NA
UHGV-2007258_35	eggNOG-mapper	1124982.MSI_00390	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	NA
UHGV-2007258_35	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-2007258_35	NCBIFam	TIGR02170.1	FAD-dependent thymidylate synthase	NA
UHGV-2007258_35	COG	COG1351	Thymidylate synthase ThyX, FAD-dependent family	NA
UHGV-2007258_35	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-2007258_36	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2007258_36	UniRef90	UniRef90_A0A1C5YXD8	Phage transcriptional regulator, RinA family	NA
UHGV-2007258_36	eggNOG-mapper	1292035.H476_1023	sigma factor activity	NA
UHGV-2007258_36	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-2007258_36	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2007258_36	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-2007258_37	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-2007258_37	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-2007258_37	UniRef90	UniRef90_UPI001484FC7A	terminase small subunit	NA
UHGV-2007258_37	eggNOG-mapper	697281.Mahau_0566	Terminase Small Subunit	NA
UHGV-2007258_37	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-2007258_37	COG	COG3728	Phage terminase, small subunit	NA
UHGV-2007258_37	Structural annotation	PF03592, COG3728	NA	NA
UHGV-2007258_38	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2007258_38	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-2007258_38	UniRef90	UniRef90_UPI001D0FBF10	PBSX family phage terminase large subunit	NA
UHGV-2007258_38	eggNOG-mapper	536232.CLM_2529	Phage terminase, large subunit, PBSX family	NA
UHGV-2007258_38	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-2007258_38	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-2007258_38	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2007258_38	COG	COG1783	Phage terminase large subunit	NA
UHGV-2007258_38	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-2007258_39	PHROG	phrog_64	portal protein	head and packaging
UHGV-2007258_39	UniRef90	UniRef90_A0A1C5YX51	Phage portal protein, putative, A118 family	NA
UHGV-2007258_39	eggNOG-mapper	1443122.Z958_p0036	Phage portal protein, SPP1 Gp6-like	NA
UHGV-2007258_39	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2007258_39	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2007258_40	PHROG	phrog_1657	head morphogenesis	head and packaging
UHGV-2007258_40	UniRef90	UniRef90_A0A1C5YWY9	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-2007258_40	eggNOG-mapper	1582149.A0A0A8WEF5_9CAUD	Phage Mu protein F like protein	NA
UHGV-2007258_41	PHROG	phrog_918	NA	unknown function
UHGV-2007258_41	UniRef90	UniRef90_UPI00096A904F	NA	NA
UHGV-2007258_41	eggNOG-mapper	1499683.CCFF01000014_gene3910	NA	NA
UHGV-2007258_41	Pfam	PF19791	NA	DUF6275
UHGV-2007258_41	Structural annotation	PF19791	NA	NA
UHGV-2007258_44	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-2007258_44	UniRef90	UniRef90_UPI000360E95E	phage scaffolding protein	NA
UHGV-2007258_44	eggNOG-mapper	545697.HMPREF0216_02848	Phage minor structural protein GP20	NA
UHGV-2007258_44	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-2007258_45	PHROG	phrog_544	major head protein	head and packaging
UHGV-2007258_45	UniRef90	UniRef90_UPI000E5CD0B7	N4-gp56 family major capsid protein	NA
UHGV-2007258_45	eggNOG-mapper	411471.SUBVAR_06940	NA	NA
UHGV-2007258_45	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-2007258_45	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2007258_46	PHROG	phrog_4020	NA	unknown function
UHGV-2007258_46	eggNOG-mapper	1121342.AUCO01000012_gene1692	NA	NA
UHGV-2007258_47	PHROG	phrog_8435	NA	unknown function
UHGV-2007258_47	eggNOG-mapper	536233.CLO_0543	NA	NA
UHGV-2007258_47	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-2007258_48	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2007258_48	UniRef90	UniRef90_A0A2H4J736	Putative tail component protein	NA
UHGV-2007258_48	eggNOG-mapper	559189.B6SBT4_9CAUD	NA	NA
UHGV-2007258_48	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-2007258_49	PHROG	phrog_7585	NA	unknown function
UHGV-2007258_49	Structural annotation	PF05657, COG5003	NA	NA
UHGV-2007258_50	PHROG	phrog_6686	tail tube protein	tail
UHGV-2007258_50	eggNOG-mapper	1304880.JAGB01000002_gene2211	NA	NA
UHGV-2007258_50	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2007258_51	PHROG	phrog_6280	NA	unknown function
UHGV-2007258_51	UniRef90	UniRef90_A0A446I9J5	Esterase	NA
UHGV-2007258_51	eggNOG-mapper	1443125.Z962_12410	NA	NA
UHGV-2007258_52	PHROG	phrog_6541	NA	unknown function
UHGV-2007258_52	eggNOG-mapper	1196322.A370_04057	NA	NA
UHGV-2007258_53	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-2007258_53	UniRef90	UniRef90_A0A1G9TYM9	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-2007258_53	eggNOG-mapper	748727.CLJU_c31220	phage tail tape measure protein	NA
UHGV-2007258_53	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2007258_53	COG	COG5283	Phage-related tail protein	NA
UHGV-2007258_54	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-2007258_54	UniRef90	UniRef90_R5XFK4	Phage tail tape measure protein TP901 family core region	NA
UHGV-2007258_54	eggNOG-mapper	537007.BLAHAN_04244	Phage tail tape measure protein, TP901 family	NA
UHGV-2007258_54	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2007258_54	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2007258_54	COG	COG5283	Phage-related tail protein	NA
UHGV-2007258_54	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-2007258_55	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2007258_55	UniRef90	UniRef90_A0A1C5YVW7	Phage-related protein	NA
UHGV-2007258_55	eggNOG-mapper	1582149.A0A0A8WHP7_9CAUD	Phage tail protein	NA
UHGV-2007258_55	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2007258_56	PHROG	phrog_13289	tail protein	tail
UHGV-2007258_56	UniRef90	UniRef90_A0A1C5YGX2	Phage-related protein	NA
UHGV-2007258_56	eggNOG-mapper	1151292.QEW_4523	Phage minor structural protein	NA
UHGV-2007258_56	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-2007258_56	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2007258_56	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2007258_56	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-2007258_56	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2007258	Yes	40,144 bps	31.17%	100.00%	0.9770
UHGV-0074329	No	40,144 bps	31.17%	100.00%	0.9762
UHGV-0378889	No	40,144 bps	31.17%	100.00%	0.9762
UHGV-1363917	No	40,144 bps	31.17%	100.00%	0.9762
UHGV-0189215	No	28,425 bps	30.07%	69.39%	0.9743
UHGV-0203366	No	12,108 bps	32.34%	29.91%	0.9831
UHGV-1549006	No	11,346 bps	32.49%	28.19%	0.9832
UHGV-1785823	No	11,076 bps	32.07%	27.51%	0.9831