vOTU-005647

Overview

vOTU representative UHGV-0205386

No. of genomes 8

Genome length 34,257 bps

Completeness 100.00% (complete)

Host Roseburia inulinivorans

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005647
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 › vSUBFAM-00485 › vGENUS-06358 › vSUBGEN-04335 › vOTU-005647
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Roseburia › Roseburia inulinivorans
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205386
BioSample	SAMN00069782
Genome length	34,257 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	45
CDS density	91.28%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205386_1	PHROG	phrog_538	minor tail protein	tail
UHGV-0205386_1	UniRef90	UniRef90_UPI0018985E41	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0205386_1	eggNOG-mapper	397290.C810_00431	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-0205386_1	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0205386_1	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0205386_2	PHROG	phrog_1220	head protein	head and packaging
UHGV-0205386_2	UniRef90	UniRef90_E2ELJ8	Truncated putative phage structural protein	NA
UHGV-0205386_2	eggNOG-mapper	1519439.JPJG01000037_gene946	COG NOG18825 non supervised orthologous group	NA
UHGV-0205386_2	Structural annotation	PF20747	NA	NA
UHGV-0205386_3	PHROG	phrog_3206	Avd protein of DGR	DNA, RNA and nucleotide metabolism
UHGV-0205386_3	UniRef90	UniRef90_A0A316Q3U8	Four helix bundle protein	NA
UHGV-0205386_3	eggNOG-mapper	1235797.C816_02835	NA	NA
UHGV-0205386_3	Pfam	PF05635	23S rRNA-intervening sequence protein	23S_rRNA_IVP
UHGV-0205386_3	Structural annotation	PF05635, NF033474, COG3308	NA	NA
UHGV-0205386_4	KOfam	K21038	brt; reverse transcriptase [EC:2.7.7.49]	NA
UHGV-0205386_4	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0205386_4	UniRef90	UniRef90_A0A658JYD7	Reverse transcriptase	NA
UHGV-0205386_4	eggNOG-mapper	1235797.C816_02836	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0205386_4	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0205386_4	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0205386_4	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0205386_4	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0205386_5	PHROG	phrog_10993	Hoc-like head decoration	head and packaging
UHGV-0205386_5	UniRef90	UniRef90_A0A1Q6KLT8	Fibronectin type-III domain-containing protein	NA
UHGV-0205386_5	eggNOG-mapper	1235797.C816_02837	NA	NA
UHGV-0205386_5	Pfam	PF19789	NA	DUF6273
UHGV-0205386_5	Structural annotation	PF19789, PF00041, PF15418, MF_04116, NF010681, COG3401	NA	NA
UHGV-0205386_6	PHROG	phrog_27545	NA	unknown function
UHGV-0205386_6	eggNOG-mapper	1203606.HMPREF1526_00344	NA	NA
UHGV-0205386_6	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0205386_7	PHROG	phrog_9428	NA	unknown function
UHGV-0205386_7	UniRef90	UniRef90_A0A7X4ZD69	Serine/threonine protein kinase	NA
UHGV-0205386_7	eggNOG-mapper	1203606.HMPREF1526_01927	NA	NA
UHGV-0205386_8	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0205386_8	PHROG	phrog_15001	endolysin	lysis
UHGV-0205386_8	UniRef90	UniRef90_A0A173XLG2	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0205386_8	eggNOG-mapper	411483.FAEPRAA2165_03397	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205386_8	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0205386_8	Pfam	PF01476	LysM domain	LysM
UHGV-0205386_8	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0205386_8	Pfam	PF00395	S-layer homology domain	SLH
UHGV-0205386_8	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205386_8	Structural annotation	PF01510, MF_04111, NF008758, COG5632, COG4193	NA	NA
UHGV-0205386_9	eggNOG-mapper	1094508.Tsac_2409	NA	NA
UHGV-0205386_9	Structural annotation	PF09682, TIGR01673	NA	NA
UHGV-0205386_10	eggNOG-mapper	537007.BLAHAN_07167	NA	NA
UHGV-0205386_11	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-0205386_11	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0205386_11	UniRef90	UniRef90_A0A1C6BG13	YcfA-like protein	NA
UHGV-0205386_11	eggNOG-mapper	913865.DOT_1066	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-0205386_11	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0205386_11	Structural annotation	PF07927, COG1724	NA	NA
UHGV-0205386_12	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0205386_12	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-0205386_12	UniRef90	UniRef90_UPI0011C9F289	type II toxin-antitoxin system HicB family antitoxin	NA
UHGV-0205386_12	eggNOG-mapper	883109.HMPREF0380_00919	NA	NA
UHGV-0205386_12	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0205386_12	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0205386_12	Structural annotation	PF15919, COG1598	NA	NA
UHGV-0205386_13	KOfam	K07482	K07482; transposase, IS30 family	NA
UHGV-0205386_13	PHROG	phrog_4646	transposase	integration and excision
UHGV-0205386_13	UniRef90	UniRef90_UPI001F3761DC	IS30 family transposase	NA
UHGV-0205386_13	eggNOG-mapper	411483.FAEPRAA2165_01933	PFAM Integrase catalytic region	NA
UHGV-0205386_13	Pfam	PF13936	Helix-turn-helix domain	HTH_38
UHGV-0205386_13	NCBIFam	NF033563.0	IS30 family transposase	NA
UHGV-0205386_13	COG	COG2826	Transposase and inactivated derivatives, IS30 family	NA
UHGV-0205386_13	Structural annotation	PF03400, PF13384, NF033563, COG2826	NA	NA
UHGV-0205386_14	KOfam	K07482	K07482; transposase, IS30 family	NA
UHGV-0205386_14	PHROG	phrog_11420	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205386_14	UniRef90	UniRef90_UPI001C3F0C82	helix-turn-helix domain-containing protein	NA
UHGV-0205386_14	eggNOG-mapper	537007.BLAHAN_04201	Helix-turn-helix domain	NA
UHGV-0205386_14	Pfam	PF13936	Helix-turn-helix domain	HTH_38
UHGV-0205386_14	Structural annotation	PF13384	NA	NA
UHGV-0205386_17	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0205386_17	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0205386_17	UniRef90	UniRef90_A0A413DGN9	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-0205386_17	eggNOG-mapper	1416012.V5URG0_9CAUD	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0205386_17	PADLOC	oMTase_00018	orphan methyltransferase	RM
UHGV-0205386_17	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0205386_17	Structural annotation	PF02086, MF_01012, TIGR00571, COG0338	NA	NA
UHGV-0205386_18	PHROG	phrog_24518	NA	unknown function
UHGV-0205386_18	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-0205386_19	PHROG	phrog_3301	pyrophosphatase	other
UHGV-0205386_19	eggNOG-mapper	755731.Clo1100_1151	Mazg nucleotide pyrophosphohydrolase	NA
UHGV-0205386_19	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-0205386_19	Structural annotation	COG1694	NA	NA
UHGV-0205386_20	PHROG	phrog_9958	NA	unknown function
UHGV-0205386_20	UniRef90	UniRef90_T0J799	NA	NA
UHGV-0205386_20	eggNOG-mapper	1519439.JPJG01000037_gene956	NA	NA
UHGV-0205386_20	Pfam	PF19789	NA	DUF6273
UHGV-0205386_22	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0205386_22	UniRef90	UniRef90_I2E8X7	Gp31	NA
UHGV-0205386_22	eggNOG-mapper	536233.CLO_3655	NA	NA
UHGV-0205386_22	Structural annotation	PF21578	NA	NA
UHGV-0205386_23	KOfam	K05925	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	NA
UHGV-0205386_23	PHROG	phrog_359	DNA methyltransferase	other
UHGV-0205386_23	UniRef90	UniRef90_A0A1M2Z7S4	DNA methyltransferase	NA
UHGV-0205386_23	eggNOG-mapper	1321778.HMPREF1982_03703	Belongs to the MT-A70-like family	NA
UHGV-0205386_23	PADLOC	MTase_II_00048	Type II methyltransferase	RM
UHGV-0205386_23	Pfam	PF05063	MT-A70	MT-A70
UHGV-0205386_23	COG	COG4725	N6-adenosine-specific RNA methylase IME4	NA
UHGV-0205386_23	Structural annotation	PF05063, MF_01872, NF010253, COG4725	NA	NA
UHGV-0205386_26	PHROG	phrog_25820	endolysin	lysis
UHGV-0205386_26	UniRef90	UniRef90_A0A3B8NVI9	LYZ2 domain-containing protein	NA
UHGV-0205386_26	eggNOG-mapper	334413.FMG_P0114	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0205386_26	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0205386_26	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-0205386_26	Structural annotation	PF01832, NF009354, COG4193	NA	NA
UHGV-0205386_27	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0205386_27	UniRef90	UniRef90_UPI000C7C87D9	NA	NA
UHGV-0205386_27	eggNOG-mapper	573061.Clocel_3558	NA	NA
UHGV-0205386_27	Pfam	PF14359	NA	DUF4406
UHGV-0205386_27	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0205386_27	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0205386_28	PHROG	phrog_824	NA	unknown function
UHGV-0205386_28	UniRef90	UniRef90_A0A6N9PZV5	VRR-NUC domain-containing protein (Fragment)	NA
UHGV-0205386_28	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-0205386_28	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0205386_31	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205386_31	eggNOG-mapper	1297617.JPJD01000020_gene311	NA	NA
UHGV-0205386_31	Structural annotation	PF06530, TIGR01636	NA	NA
UHGV-0205386_32	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0205386_32	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205386_32	UniRef90	UniRef90_A0A1L3NE17	HNH endonuclease family protein	NA
UHGV-0205386_32	eggNOG-mapper	1089548.KI783301_gene3222	HNH endonuclease	NA
UHGV-0205386_32	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0205386_32	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0205386_33	PHROG	phrog_1066	NA	unknown function
UHGV-0205386_33	eggNOG-mapper	1243664.CAVL020000054_gene3027	NA	NA
UHGV-0205386_33	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-0205386_34	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0205386_34	UniRef90	UniRef90_A0A1M4ZG50	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0205386_34	eggNOG-mapper	1444310.JANV01000004_gene2684	Terminase	NA
UHGV-0205386_34	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0205386_34	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0205386_34	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0205386_34	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0205386_35	PHROG	phrog_12	portal protein	head and packaging
UHGV-0205386_35	UniRef90	UniRef90_UPI001ADCEA93	phage portal protein	NA
UHGV-0205386_35	eggNOG-mapper	573061.Clocel_2439	Portal protein	NA
UHGV-0205386_35	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0205386_35	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0205386_35	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0205386_36	KOfam	K06904	NA	NA
UHGV-0205386_36	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0205386_36	UniRef90	UniRef90_UPI00197C1F9C	HK97 family phage prohead protease	NA
UHGV-0205386_36	eggNOG-mapper	324057.Pjdr2_1542	Caudovirus prohead serine protease	NA
UHGV-0205386_36	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0205386_36	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0205386_36	COG	COG3740	Phage head maturation protease	NA
UHGV-0205386_36	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0205386_37	PHROG	phrog_10	major head protein	head and packaging
UHGV-0205386_37	UniRef90	UniRef90_A0A841T7F8	Phage major capsid protein	NA
UHGV-0205386_37	eggNOG-mapper	315730.BcerKBAB4_3428	Phage capsid family	NA
UHGV-0205386_37	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0205386_37	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0205386_37	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0205386_37	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0205386_38	PHROG	phrog_5223	neck protein	connector
UHGV-0205386_38	UniRef90	UniRef90_UPI000EAFC885	head-tail connector protein	NA
UHGV-0205386_38	eggNOG-mapper	1382358.JHVN01000024_gene1709	NA	NA
UHGV-0205386_38	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0205386_39	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0205386_39	UniRef90	UniRef90_C9LCM8	Putative phage head-tail adaptor	NA
UHGV-0205386_39	eggNOG-mapper	411470.RUMGNA_02070	NA	NA
UHGV-0205386_39	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0205386_40	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205386_40	UniRef90	UniRef90_A0A658JX18	HK97 gp10 family phage protein	NA
UHGV-0205386_40	eggNOG-mapper	411470.RUMGNA_02071	NA	NA
UHGV-0205386_40	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0205386_40	Structural annotation	TIGR01725	NA	NA
UHGV-0205386_41	PHROG	phrog_78	tail terminator	connector
UHGV-0205386_41	UniRef90	UniRef90_UPI0003697F12	NA	NA
UHGV-0205386_41	eggNOG-mapper	1540257.JQMW01000004_gene412	NA	NA
UHGV-0205386_41	Structural annotation	PF05657, NF040576, COG3978	NA	NA
UHGV-0205386_42	PHROG	phrog_88	major tail protein	tail
UHGV-0205386_42	UniRef90	UniRef90_UPI001896F62D	phage tail protein	NA
UHGV-0205386_42	eggNOG-mapper	1519439.JPJG01000037_gene949	phage major tail protein, phi13 family	NA
UHGV-0205386_42	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0205386_42	COG	COG5492	NA	NA
UHGV-0205386_42	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0205386_43	PHROG	phrog_2115	tail protein	tail
UHGV-0205386_43	eggNOG-mapper	1297617.JPJD01000020_gene306	NA	NA
UHGV-0205386_43	Structural annotation	PF11836	NA	NA
UHGV-0205386_44	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0205386_44	UniRef90	UniRef90_A0A1Q6KLJ1	PhageMin_Tail domain-containing protein	NA
UHGV-0205386_44	eggNOG-mapper	397290.C810_00429	Phage-related minor tail protein	NA
UHGV-0205386_44	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0205386_44	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0205386_45	PHROG	phrog_36410	NA	unknown function
UHGV-0205386_45	UniRef90	UniRef90_A0A658JW57	Phage tail family protein	NA
UHGV-0205386_45	eggNOG-mapper	411470.RUMGNA_02077	COG NOG18823 non supervised orthologous group	NA
UHGV-0205386_45	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0205386_45	COG	COG4722	Phage-related protein YomH	NA
UHGV-0205386_45	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205386	Yes	34,257 bps	49.17%	100.00%	0.9761
UHGV-1947518	No	34,010 bps	49.27%	100.00%	0.9777
UHGV-0299192	No	35,138 bps	49.76%	99.90%	0.9778
UHGV-1510364	No	34,240 bps	49.13%	99.90%	0.9762
UHGV-2235863	No	34,114 bps	49.31%	99.90%	0.9783
UHGV-2130149	No	31,928 bps	49.27%	93.88%	0.9789
UHGV-1467816	No	22,598 bps	48.82%	66.44%	0.9799
UHGV-1761386	No	15,248 bps	48.27%	44.83%	0.9811