vOTU-005653

Overview

vOTU representative UHGV-1351954

No. of genomes 9

Genome length 32,883 bps

Completeness 100.00% (complete)

Host CAG-353 sp900066885

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005653
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-00800 › vGENUS-01748 › vSUBGEN-18187 › vOTU-005653
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › CAG-353 › CAG-353 sp900066885
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1351954
BioSample	SAMEA2147983
Genome length	32,883 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	94.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1351954_1	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1351954_1	UniRef90	UniRef90_A0A1C6GMQ4	Phage-related protein	NA
UHGV-1351954_1	eggNOG-mapper	1504822.CCNO01000012_gene489	phage tail tape measure protein	NA
UHGV-1351954_1	COG	COG5412	Phage-related protein	NA
UHGV-1351954_2	PHROG	phrog_706	NA	unknown function
UHGV-1351954_2	UniRef90	UniRef90_A0A1C6GMP1	Bacteriophage Gp15 protein	NA
UHGV-1351954_2	eggNOG-mapper	1321782.HMPREF1986_02275	Bacteriophage Gp15 protein	NA
UHGV-1351954_2	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1351954_2	Structural annotation	PF06854	NA	NA
UHGV-1351954_3	eggNOG-mapper	536233.CLO_0892	NA	NA
UHGV-1351954_3	Structural annotation	PF10666	NA	NA
UHGV-1351954_4	PHROG	phrog_820	major tail protein	tail
UHGV-1351954_4	UniRef90	UniRef90_A0A174M1L1	S-l_SbsC_C domain-containing protein	NA
UHGV-1351954_4	eggNOG-mapper	665956.HMPREF1032_02945	NA	NA
UHGV-1351954_4	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1351954_5	Structural annotation	PF08873	NA	NA
UHGV-1351954_7	PHROG	phrog_793	head-tail adaptor	connector
UHGV-1351954_7	UniRef90	UniRef90_A0A1C6GM46	Minor capsid protein	NA
UHGV-1351954_7	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1351954_8	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1351954_9	PHROG	phrog_267	major head protein	head and packaging
UHGV-1351954_9	UniRef90	UniRef90_A0A1C6GMA6	S-l_SbsC_C domain-containing protein	NA
UHGV-1351954_9	eggNOG-mapper	718252.FP2_06660	NA	NA
UHGV-1351954_9	Structural annotation	PF05065, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1351954_10	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1351954_10	eggNOG-mapper	1280692.AUJL01000027_gene2161	NA	NA
UHGV-1351954_10	Structural annotation	PF10788, MF_02110	NA	NA
UHGV-1351954_11	PHROG	phrog_3292	NA	unknown function
UHGV-1351954_11	UniRef90	UniRef90_UPI00164CD958	KTSC domain-containing protein	NA
UHGV-1351954_11	eggNOG-mapper	1121342.AUCO01000012_gene1729	KTSC domain	NA
UHGV-1351954_11	Pfam	PF13619	KTSC domain	KTSC
UHGV-1351954_11	COG	COG4249	NA	NA
UHGV-1351954_11	Structural annotation	PF13619	NA	NA
UHGV-1351954_13	Structural annotation	PF11344	NA	NA
UHGV-1351954_14	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1351954_14	UniRef90	UniRef90_A0A1C6FMR4	Phage minor capsid protein 2	NA
UHGV-1351954_14	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-1351954_14	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1351954_14	COG	COG2369	NA	NA
UHGV-1351954_14	Structural annotation	PF06152	NA	NA
UHGV-1351954_15	PHROG	phrog_533	portal protein	head and packaging
UHGV-1351954_15	UniRef90	UniRef90_A0A1C6DY21	Phage portal protein, putative, A118 family	NA
UHGV-1351954_15	eggNOG-mapper	997296.PB1_16244	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1351954_15	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1351954_15	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-1351954_16	PHROG	phrog_9479	NA	unknown function
UHGV-1351954_16	Structural annotation	PF15529	NA	NA
UHGV-1351954_17	PHROG	phrog_8680	NA	unknown function
UHGV-1351954_17	UniRef90	UniRef90_A0A373V619	NA	NA
UHGV-1351954_17	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-1351954_17	Pfam	PF14386	NA	DUF4417
UHGV-1351954_17	Structural annotation	PF14386	NA	NA
UHGV-1351954_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1351954_18	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1351954_18	UniRef90	UniRef90_A0A3A6EPV3	PBSX family phage terminase large subunit	NA
UHGV-1351954_18	eggNOG-mapper	642492.Clole_0814	Phage terminase, large subunit, PBSX family	NA
UHGV-1351954_18	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1351954_18	COG	COG1783	Phage terminase large subunit	NA
UHGV-1351954_18	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1351954_19	PHROG	phrog_2412	NA	unknown function
UHGV-1351954_19	UniRef90	UniRef90_UPI0011CC13F5	stress-induced protein	NA
UHGV-1351954_19	eggNOG-mapper	742765.HMPREF9457_02118	NA	NA
UHGV-1351954_20	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1351954_20	UniRef90	UniRef90_UPI0010538756	NA	NA
UHGV-1351954_20	eggNOG-mapper	1200567.JNKD01000011_gene654	sigma factor activity	NA
UHGV-1351954_20	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1351954_20	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1351954_20	Structural annotation	PF07374, MF_00245, TIGR02980, COG2739	NA	NA
UHGV-1351954_21	PHROG	phrog_8684	NA	unknown function
UHGV-1351954_21	UniRef90	UniRef90_A0A1C6FN30	YopX protein	NA
UHGV-1351954_21	eggNOG-mapper	1121097.JCM15093_2710	YopX protein	NA
UHGV-1351954_21	Pfam	PF09643	YopX protein	YopX
UHGV-1351954_21	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1351954_21	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1351954_22	PHROG	phrog_25176	NA	unknown function
UHGV-1351954_22	UniRef90	UniRef90_UPI001BC93519	KTSC domain-containing protein	NA
UHGV-1351954_22	eggNOG-mapper	1450525.JATV01000019_gene2409	NA	NA
UHGV-1351954_23	PHROG	phrog_2776	NA	unknown function
UHGV-1351954_23	eggNOG-mapper	411490.ANACAC_00794	NA	NA
UHGV-1351954_23	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-1351954_27	Structural annotation	PF11483	NA	NA
UHGV-1351954_29	PHROG	phrog_19415	NA	unknown function
UHGV-1351954_29	UniRef90	UniRef90_A0A1C6FNF0	NA	NA
UHGV-1351954_29	eggNOG-mapper	33035.JPJF01000071_gene4467	NA	NA
UHGV-1351954_29	Pfam	PF19808	NA	DUF6291
UHGV-1351954_29	Structural annotation	PF19808	NA	NA
UHGV-1351954_30	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1351954_30	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1351954_30	UniRef90	UniRef90_A0A1C6FN64	Single-stranded DNA-binding protein	NA
UHGV-1351954_30	eggNOG-mapper	641112.ACOK01000080_gene3234	Single-stranded DNA-binding protein	NA
UHGV-1351954_30	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1351954_30	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1351954_30	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1351954_30	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1351954_30	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1351954_31	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-1351954_31	UniRef90	UniRef90_A0A1C6FNL5	ERCC4 domain-containing protein	NA
UHGV-1351954_31	eggNOG-mapper	357809.Cphy_2986	NA	NA
UHGV-1351954_31	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-1351954_31	Structural annotation	PF03834, NF040956, COG1948	NA	NA
UHGV-1351954_32	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1351954_32	UniRef90	UniRef90_UPI00041F978E	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-1351954_32	eggNOG-mapper	1120998.AUFC01000030_gene2216	NA	NA
UHGV-1351954_32	Pfam	PF12684	NA	DUF3799
UHGV-1351954_32	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-1351954_32	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-1351954_33	PHROG	phrog_1499	NA	unknown function
UHGV-1351954_33	UniRef90	UniRef90_A0A1C6FNE5	Chromosome segregation protein	NA
UHGV-1351954_33	eggNOG-mapper	1120998.AUFC01000030_gene2215	DNA recombination	NA
UHGV-1351954_33	Pfam	PF13476	AAA domain	AAA_23
UHGV-1351954_33	COG	COG0497	DNA repair ATPase RecN	NA
UHGV-1351954_33	Structural annotation	PF11398, MF_00365, NF008121, COG0497	NA	NA
UHGV-1351954_34	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1351954_34	UniRef90	UniRef90_UPI0011C8A287	recombinase RecT	NA
UHGV-1351954_34	eggNOG-mapper	33035.JPJF01000071_gene4462	NA	NA
UHGV-1351954_34	Structural annotation	PF03837, TIGR01913	NA	NA
UHGV-1351954_35	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1351954_35	eggNOG-mapper	33035.JPJF01000123_gene2435	NA	NA
UHGV-1351954_35	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1351954_35	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-1351954_37	Structural annotation	MF_00273	NA	NA
UHGV-1351954_39	PHROG	phrog_5079	NA	unknown function
UHGV-1351954_39	eggNOG-mapper	1122143.AUEG01000001_gene582	NA	NA
UHGV-1351954_40	UniRef90	UniRef90_A0A352A2H2	DNA-binding protein	NA
UHGV-1351954_40	eggNOG-mapper	929506.CbC4_1187	NA	NA
UHGV-1351954_44	UniRef90	UniRef90_A0A3D5PC55	XRE family transcriptional regulator	NA
UHGV-1351954_44	eggNOG-mapper	428125.CLOLEP_02737	NA	NA
UHGV-1351954_44	Structural annotation	TIGR03070	NA	NA
UHGV-1351954_45	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1351954_45	PHROG	phrog_95	integrase	integration and excision
UHGV-1351954_45	UniRef90	UniRef90_A0A1C6GEY5	Resolvase, N terminal domain	NA
UHGV-1351954_45	eggNOG-mapper	537013.CLOSTMETH_02040	NA	NA
UHGV-1351954_45	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1351954_45	Pfam	PF07508	Recombinase	Recombinase
UHGV-1351954_45	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1351954_45	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1351954_45	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-1351954_46	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1351954_46	PHROG	phrog_1794	amidase	lysis
UHGV-1351954_46	UniRef90	UniRef90_R7KX59	Muramidase (Flagellum-specific)	NA
UHGV-1351954_46	eggNOG-mapper	1298920.KI911353_gene2668	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-1351954_46	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1351954_46	Pfam	PF05036	SPOR domain	SPOR
UHGV-1351954_46	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1351954_46	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1351954_47	PHROG	phrog_199	holin	lysis
UHGV-1351954_47	UniRef90	UniRef90_A0A1C6CUD9	Phage-related holin (Lysis protein)	NA
UHGV-1351954_47	eggNOG-mapper	1120746.CCNL01000017_gene2574	toxin secretion phage lysis holin	NA
UHGV-1351954_47	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1351954_47	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1351954_47	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1351954_47	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1351954_49	Structural annotation	PF21621	NA	NA
UHGV-1351954_52	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-1351954_53	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1351954	Yes	32,883 bps	47.72%	100.00%	0.9713
UHGV-1355728	No	32,883 bps	47.75%	100.00%	0.9727
UHGV-1542634	No	38,651 bps	45.93%	99.90%	0.9651
UHGV-0041594	No	33,364 bps	47.75%	99.90%	0.9733
UHGV-1501860	No	33,364 bps	47.75%	99.90%	0.9733
UHGV-1476039	No	30,036 bps	47.21%	88.89%	0.9741
UHGV-1351922	No	18,514 bps	48.49%	54.34%	0.9769
UHGV-0385511	No	14,921 bps	49.44%	43.87%	0.9798
UHGV-1618421	No	10,563 bps	50.00%	31.10%	0.9791