vOTU-005758

Overview

vOTU representative UHGV-2033929

No. of genomes 4

Genome length 41,688 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005758
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vGENUS-20666 › vSUBGEN-40842 › vOTU-005758
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2033929
BioSample	SAMEA2737684
Genome length	41,688 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	83
CDS density	91.26%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2033929_1	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-2033929_2	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-2033929_2	UniRef90	UniRef90_A0A315Y4I9	Lar family restriction alleviation protein	NA
UHGV-2033929_2	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-2033929_2	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-2033929_2	Structural annotation	TIGR03655	NA	NA
UHGV-2033929_8	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2033929_8	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2033929_8	UniRef90	UniRef90_A0A8D9PDC4	Repressor protein	NA
UHGV-2033929_8	eggNOG-mapper	1226322.HMPREF1545_00039	sequence-specific DNA binding	NA
UHGV-2033929_8	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2033929_8	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2033929_8	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-2033929_9	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-2033929_9	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-2033929_9	UniRef90	UniRef90_UPI001D05F697	terminase small subunit	NA
UHGV-2033929_9	eggNOG-mapper	697281.Mahau_0566	Terminase Small Subunit	NA
UHGV-2033929_9	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-2033929_9	COG	COG3728	Phage terminase, small subunit	NA
UHGV-2033929_9	Structural annotation	PF03592, COG3728	NA	NA
UHGV-2033929_10	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2033929_10	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-2033929_10	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-2033929_10	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-2033929_10	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-2033929_10	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-2033929_10	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2033929_10	COG	COG1783	Phage terminase large subunit	NA
UHGV-2033929_10	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-2033929_11	PHROG	phrog_533	portal protein	head and packaging
UHGV-2033929_11	UniRef90	UniRef90_UPI0006C81717	phage portal protein	NA
UHGV-2033929_11	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-2033929_11	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2033929_11	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-2033929_12	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2033929_12	UniRef90	UniRef90_UPI001D080D49	phage minor capsid protein	NA
UHGV-2033929_12	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-2033929_12	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2033929_12	COG	COG2369	NA	NA
UHGV-2033929_12	Structural annotation	PF06152	NA	NA
UHGV-2033929_14	Pfam	PF08681	NA	DUF1778
UHGV-2033929_15	Pfam	PF01129	NAD:arginine ADP-ribosyltransferase	ART
UHGV-2033929_17	UniRef90	UniRef90_A0A2Z4Q9Y8	Minor structural protein	NA
UHGV-2033929_17	eggNOG-mapper	1232443.BAIA02000078_gene31	NA	NA
UHGV-2033929_17	Structural annotation	PF06810	NA	NA
UHGV-2033929_18	PHROG	phrog_10	major head protein	head and packaging
UHGV-2033929_18	UniRef90	UniRef90_A0A2U1BEF2	HK97 family phage major capsid protein	NA
UHGV-2033929_18	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-2033929_18	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2033929_18	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2033929_18	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2033929_18	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2033929_19	PHROG	phrog_541	head-tail adaptor	connector
UHGV-2033929_19	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-2033929_20	PHROG	phrog_3366	NA	unknown function
UHGV-2033929_20	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-2033929_20	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-2033929_21	PHROG	phrog_556	minor head protein	head and packaging
UHGV-2033929_21	UniRef90	UniRef90_A0A2U1BEM0	Minor capsid protein	NA
UHGV-2033929_21	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-2033929_21	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-2033929_21	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-2033929_22	PHROG	phrog_3266	tail completion	connector
UHGV-2033929_22	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-2033929_22	Structural annotation	PF12691	NA	NA
UHGV-2033929_23	PHROG	phrog_3099	NA	unknown function
UHGV-2033929_23	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-2033929_23	Structural annotation	TIGR02126	NA	NA
UHGV-2033929_24	PHROG	phrog_11299	NA	unknown function
UHGV-2033929_24	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-2033929_24	Structural annotation	PF10666	NA	NA
UHGV-2033929_25	PHROG	phrog_706	NA	unknown function
UHGV-2033929_25	UniRef90	UniRef90_UPI000682A80B	Gp15 family bacteriophage protein	NA
UHGV-2033929_25	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-2033929_25	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2033929_25	Structural annotation	PF06854	NA	NA
UHGV-2033929_26	PHROG	phrog_806	NA	unknown function
UHGV-2033929_26	UniRef90	UniRef90_UPI00137B5163	NA	NA
UHGV-2033929_26	eggNOG-mapper	397290.C810_05150	NA	NA
UHGV-2033929_26	Pfam	PF11611	NA	DUF4352
UHGV-2033929_26	Structural annotation	PF11611, MF_00791, NF003967, COG2967	NA	NA
UHGV-2033929_27	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2033929_27	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-2033929_27	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-2033929_27	COG	COG1511	NA	NA
UHGV-2033929_27	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-2033929_28	PHROG	phrog_1194	NA	unknown function
UHGV-2033929_28	eggNOG-mapper	1232443.BAIA02000078_gene17	NA	NA
UHGV-2033929_28	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-2033929_29	PHROG	phrog_32308	NA	unknown function
UHGV-2033929_29	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-2033929_29	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-2033929_29	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-2033929_30	UniRef90	UniRef90_A0A810QCC8	Peptidase S74 domain-containing protein	NA
UHGV-2033929_30	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-2033929_32	Pfam	PF18902	NA	DUF5658
UHGV-2033929_32	Structural annotation	PF18902	NA	NA
UHGV-2033929_35	PHROG	phrog_10993	Hoc-like head decoration	head and packaging
UHGV-2033929_35	UniRef90	UniRef90_A0A252F2M2	NA	NA
UHGV-2033929_35	Pfam	PF19789	NA	DUF6273
UHGV-2033929_35	Structural annotation	PF19789	NA	NA
UHGV-2033929_38	PHROG	phrog_937	hemolysin	other
UHGV-2033929_38	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-2033929_40	PHROG	phrog_881	holin	lysis
UHGV-2033929_40	UniRef90	UniRef90_A0A133N4A6	Holin family protein	NA
UHGV-2033929_40	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-2033929_40	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-2033929_40	Structural annotation	PF16938	NA	NA
UHGV-2033929_41	KOfam	K17733	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	NA
UHGV-2033929_41	PHROG	phrog_6523	endolysin	lysis
UHGV-2033929_41	UniRef90	UniRef90_A0A3D4D7X9	Peptidase_M15_4 domain-containing protein	NA
UHGV-2033929_41	eggNOG-mapper	1519439.JPJG01000023_gene536	D-alanyl-D-alanine carboxypeptidase	NA
UHGV-2033929_41	Pfam	PF13539	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
UHGV-2033929_41	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-2033929_41	Structural annotation	PF02557, MF_01924, NF000380, COG1876	NA	NA
UHGV-2033929_42	eggNOG-mapper	742740.HMPREF9474_00056	NA	NA
UHGV-2033929_42	Structural annotation	TIGR03826	NA	NA
UHGV-2033929_43	UniRef90	UniRef90_A0A6N3FXW7	Helix-turn-helix	NA
UHGV-2033929_43	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-2033929_43	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2033929_43	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2033929_43	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2033929_47	PHROG	phrog_3754	NA	unknown function
UHGV-2033929_47	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-2033929_48	PHROG	phrog_21718	NA	unknown function
UHGV-2033929_48	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2033929_49	PHROG	phrog_22984	NA	unknown function
UHGV-2033929_50	PHROG	phrog_16490	NA	unknown function
UHGV-2033929_50	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2033929_52	PHROG	phrog_20016	NA	unknown function
UHGV-2033929_52	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-2033929_52	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-2033929_52	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2033929_53	PHROG	phrog_28802	NA	unknown function
UHGV-2033929_54	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-2033929_55	KOfam	K14059	int; integrase	NA
UHGV-2033929_55	PHROG	phrog_1	integrase	integration and excision
UHGV-2033929_55	UniRef90	UniRef90_UPI001EDE32BF	site-specific integrase	NA
UHGV-2033929_55	eggNOG-mapper	1226322.HMPREF1545_00144	Belongs to the 'phage' integrase family	NA
UHGV-2033929_55	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2033929_55	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2033929_55	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-2033929_56	UniRef90	UniRef90_A7VNR4	HTH cro/C1-type domain-containing protein	NA
UHGV-2033929_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2033929_56	COG	COG1426	NA	NA
UHGV-2033929_56	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-2033929_57	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2033929_57	UniRef90	UniRef90_A0A3D3F869	HTH cro/C1-type domain-containing protein (Fragment)	NA
UHGV-2033929_57	eggNOG-mapper	742738.HMPREF9460_00844	Transcriptional	NA
UHGV-2033929_57	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2033929_57	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-2033929_59	eggNOG-mapper	1235799.C818_04193	NA	NA
UHGV-2033929_59	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-2033929_60	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2033929_60	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2033929_60	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2033929_64	PHROG	phrog_22529	NA	unknown function
UHGV-2033929_64	UniRef90	UniRef90_A0A352RPR8	3D domain-containing protein	NA
UHGV-2033929_64	eggNOG-mapper	537007.BLAHAN_05080	3D domain	NA
UHGV-2033929_64	Pfam	PF06725	3D domain	3D
UHGV-2033929_64	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2033929_64	Structural annotation	PF06725, MF_02071, NF040670, COG3584	NA	NA
UHGV-2033929_67	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2033929_67	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-2033929_67	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-2033929_67	Pfam	PF04404	ERF superfamily	ERF
UHGV-2033929_67	Structural annotation	PF04404, COG4712	NA	NA
UHGV-2033929_68	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2033929_68	UniRef90	UniRef90_UPI000C7BF263	recombination protein NinB	NA
UHGV-2033929_68	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-2033929_68	Structural annotation	PF05772	NA	NA
UHGV-2033929_69	PHROG	phrog_7566	NA	unknown function
UHGV-2033929_69	UniRef90	UniRef90_A0A3A5TWB4	Phosphoenolpyruvate carboxykinase	NA
UHGV-2033929_70	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2033929_70	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2033929_70	UniRef90	UniRef90_R5SNS5	Single-stranded DNA-binding protein	NA
UHGV-2033929_70	eggNOG-mapper	1519439.JPJG01000082_gene432	Single-strand binding protein family	NA
UHGV-2033929_70	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2033929_70	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2033929_70	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2033929_70	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2033929_70	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2033929_71	PHROG	phrog_16304	NA	unknown function
UHGV-2033929_71	UniRef90	UniRef90_A0A810PZI8	NA	NA
UHGV-2033929_71	eggNOG-mapper	1388763.O165_010775	NA	NA
UHGV-2033929_71	Pfam	PF19808	NA	DUF6291
UHGV-2033929_71	Structural annotation	PF19808	NA	NA
UHGV-2033929_72	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-2033929_72	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2033929_72	UniRef90	UniRef90_UPI00137A9A0F	ATP-binding protein	NA
UHGV-2033929_72	eggNOG-mapper	203119.Cthe_2467	IstB-like ATP binding protein	NA
UHGV-2033929_72	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-2033929_72	NCBIFam	NF005992.0	hypothetical protein	NA
UHGV-2033929_72	COG	COG1484	DNA replication protein DnaC	NA
UHGV-2033929_72	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-2033929_73	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2033929_73	UniRef90	UniRef90_UPI001C0170D2	NA	NA
UHGV-2033929_73	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-2033929_73	Pfam	PF06356	NA	DUF1064
UHGV-2033929_73	Structural annotation	PF06356	NA	NA
UHGV-2033929_75	KOfam	K20391	plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes	NA
UHGV-2033929_75	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2033929_75	UniRef90	UniRef90_A0A315Y1E7	DNA-binding XRE family transcriptional regulator	NA
UHGV-2033929_75	eggNOG-mapper	1168034.FH5T_16240	transcriptional regulator	NA
UHGV-2033929_75	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-2033929_75	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-2033929_75	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2033929_76	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2033929_77	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2033929_78	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2033929_78	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2033929_78	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2033929_79	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-2033929_79	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-2033929_79	UniRef90	UniRef90_A0A1H7KWC5	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	NA
UHGV-2033929_79	eggNOG-mapper	665956.HMPREF1032_00140	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-2033929_79	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-2033929_79	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-2033929_79	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-2033929_80	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-2033929_80	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2033929_80	UniRef90	UniRef90_A0A1C6AHB8	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2033929_80	eggNOG-mapper	622312.ROSEINA2194_01264	C-5 cytosine-specific DNA methylase	NA
UHGV-2033929_80	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-2033929_80	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2033929_80	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2033929	Yes	41,688 bps	52.51%	100.00%	0.9810
UHGV-0073512	No	41,688 bps	52.51%	100.00%	0.9814
UHGV-1433633	No	41,688 bps	52.51%	100.00%	0.9814
UHGV-0190902	No	28,114 bps	52.30%	66.22%	0.9816