vOTU-005872

Overview

No. of genomes 64

Genome length 17,462 bps

Completeness 100.00% (complete)

Host Firmicutes A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005872
Number of genomes	64
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-02797 › vGENUS-03644 › vSUBGEN-01974 › vOTU-005872
Host taxonomy	Bacteria › Firmicutes A
Host range breadth	Phylum
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1475855
BioSample	NA
Genome length	17,462 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	22
CDS density	89.83%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1475855_2	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1475855_2	eggNOG-mapper	10753.B7SSN2_BPNF	NA	NA
UHGV-1475855_3	PHROG	phrog_2038	upper collar connector	connector
UHGV-1475855_3	UniRef90	UniRef90_A0A1W7LXQ5	Putative Connector protein	NA
UHGV-1475855_3	eggNOG-mapper	338473.A6XAD7_9CAUD	Phage Connector (GP10)	NA
UHGV-1475855_3	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1475855_3	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1475855_4	PHROG	phrog_2248	tail protein	tail
UHGV-1475855_4	UniRef90	UniRef90_A0A843GNE5	Caud_tail_N domain-containing protein	NA
UHGV-1475855_4	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-1475855_4	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1475855_4	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1475855_4	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1475855_5	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1475855_5	UniRef90	UniRef90_UPI000D1EFE69	phage head protein	NA
UHGV-1475855_5	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1475855_5	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1475855_7	PHROG	phrog_199	holin	lysis
UHGV-1475855_7	UniRef90	UniRef90_S0JIJ3	Toxin secretion/phage lysis holin	NA
UHGV-1475855_7	eggNOG-mapper	1235790.C805_00883	Bacteriophage holin family	NA
UHGV-1475855_7	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1475855_7	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1475855_7	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1475855_7	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1475855_8	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1475855_8	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1475855_8	UniRef90	UniRef90_B7SSM2	DNA polymerase	NA
UHGV-1475855_8	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-1475855_8	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1475855_8	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1475855_9	PHROG	phrog_6358	DNA terminal protein	DNA, RNA and nucleotide metabolism
UHGV-1475855_9	Pfam	PF05435	Phi-29 DNA terminal protein GP3	Phi-29_GP3
UHGV-1475855_10	PHROG	phrog_10365	late transcriptional activator	transcription regulation
UHGV-1475855_10	Pfam	PF05464	Phi-29-like late genes activator (early protein GP4)	Phi-29_GP4
UHGV-1475855_10	Structural annotation	PF05464	NA	NA
UHGV-1475855_11	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1475855_11	eggNOG-mapper	307240.Q5ILD0_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-1475855_11	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-1475855_12	PHROG	phrog_2150	terminase	head and packaging
UHGV-1475855_12	UniRef90	UniRef90_A0A843HWD4	Phage DNA encapsidation protein	NA
UHGV-1475855_12	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1475855_12	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1475855_12	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1475855_13	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1475855_13	PHROG	phrog_15001	endolysin	lysis
UHGV-1475855_13	UniRef90	UniRef90_A0A7X8ZAJ8	Amidase	NA
UHGV-1475855_13	eggNOG-mapper	498761.HM1_2867	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-1475855_13	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1475855_13	COG	COG1388	LysM repeat	NA
UHGV-1475855_13	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1475855_15	Structural annotation	PF06013, MF_00683, NF003844, COG4842	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1475855	Yes	17,462 bps	35.87%	100.00%	0.9748
UHGV-1477571	No	17,268 bps	36.04%	100.00%	0.9753
UHGV-1896109	No	17,348 bps	36.42%	85.07%	0.9745
UHGV-1435742	No	17,486 bps	35.88%	84.08%	0.9725
UHGV-1479273	No	17,454 bps	35.93%	83.93%	0.9720
UHGV-1443535	No	17,512 bps	36.05%	83.72%	0.9703
UHGV-1359004	No	17,529 bps	36.07%	83.58%	0.9767
UHGV-1475815	No	17,444 bps	36.12%	83.39%	0.9750
UHGV-1475818	No	17,446 bps	36.01%	83.28%	0.9745
UHGV-1479278	No	17,449 bps	36.01%	83.25%	0.9753
UHGV-0103165	No	17,225 bps	35.90%	82.77%	0.9778
UHGV-1476225	No	17,225 bps	35.90%	82.77%	0.9778
UHGV-1928498	No	17,201 bps	36.05%	82.71%	0.9736
UHGV-0051866	No	17,296 bps	36.01%	82.69%	0.9725
UHGV-1478754	No	17,296 bps	36.01%	82.69%	0.9725
UHGV-0820772	No	17,204 bps	35.87%	82.53%	0.9762
UHGV-1480132	No	17,245 bps	36.13%	82.52%	0.9755
UHGV-1480584	No	17,147 bps	36.04%	82.50%	0.9703
UHGV-0222309	No	17,260 bps	36.03%	82.43%	0.9750
UHGV-1395096	No	16,824 bps	36.14%	82.43%	0.9752
UHGV-2190665	No	17,152 bps	36.11%	82.40%	0.9754
UHGV-1477062	No	17,142 bps	36.09%	82.34%	0.9770
UHGV-1394395	No	16,799 bps	36.14%	82.30%	0.9760
UHGV-1392575	No	17,103 bps	36.17%	82.15%	0.9754
UHGV-1476639	No	17,156 bps	36.20%	82.01%	0.9756
UHGV-1476886	No	17,148 bps	36.38%	81.96%	0.9719
UHGV-1400758	No	17,028 bps	36.05%	81.92%	0.9745
UHGV-1397338	No	17,101 bps	36.24%	81.75%	0.9760
UHGV-1397345	No	17,101 bps	36.24%	81.75%	0.9759
UHGV-1490746	No	16,674 bps	36.19%	81.69%	0.9741
UHGV-0054371	No	16,739 bps	36.04%	81.67%	0.9755
UHGV-1483439	No	16,739 bps	36.04%	81.67%	0.9755
UHGV-1394396	No	16,798 bps	36.22%	81.50%	0.9734
UHGV-1394398	No	16,798 bps	36.21%	81.50%	0.9768
UHGV-1398905	No	16,796 bps	36.22%	81.49%	0.9733
UHGV-1394868	No	17,063 bps	36.12%	81.48%	0.9757
UHGV-0188248	No	16,920 bps	36.05%	81.41%	0.9755
UHGV-1397148	No	16,998 bps	36.19%	81.26%	0.9757
UHGV-1396053	No	16,969 bps	36.04%	81.12%	0.9752
UHGV-1484406	No	16,556 bps	36.29%	81.11%	0.9747
UHGV-1395693	No	16,978 bps	36.19%	81.10%	0.9727
UHGV-2206908	No	16,835 bps	36.17%	81.00%	0.9734
UHGV-1398144	No	16,931 bps	36.18%	80.94%	0.9746
UHGV-2137839	No	16,923 bps	36.21%	80.81%	0.9763
UHGV-1394397	No	16,797 bps	36.16%	80.69%	0.9746
UHGV-1398901	No	16,794 bps	36.17%	80.69%	0.9762
UHGV-1487479	No	16,772 bps	36.19%	80.57%	0.9767
UHGV-1482685	No	16,769 bps	36.22%	80.57%	0.9748
UHGV-1483584	No	16,545 bps	36.26%	79.48%	0.9772
UHGV-1415213	No	16,257 bps	36.11%	78.11%	0.9747
UHGV-0067882	No	16,257 bps	36.11%	77.51%	0.9747
UHGV-1458478	No	15,388 bps	36.26%	75.29%	0.9756
UHGV-1458887	No	15,409 bps	36.26%	73.74%	0.9737
UHGV-1457104	No	15,363 bps	36.09%	73.44%	0.9745
UHGV-1454316	No	15,332 bps	36.03%	73.23%	0.9755
UHGV-1458097	No	15,322 bps	36.05%	73.11%	0.9762
UHGV-1452983	No	15,235 bps	36.17%	72.83%	0.9753
UHGV-1500248	No	12,799 bps	36.51%	61.07%	0.9721
UHGV-1487846	No	12,554 bps	36.59%	60.09%	0.9756
UHGV-1829476	No	12,226 bps	36.70%	56.66%	0.9786
UHGV-1440895	No	10,730 bps	36.11%	53.03%	0.9719
UHGV-1700904	No	10,896 bps	36.70%	50.79%	0.9791
UHGV-1560615	No	14,614 bps	36.70%	50.59%	0.9743
UHGV-1668933	No	10,072 bps	35.92%	34.38%	0.9748