vOTU-005918

Overview

vOTU representative UHGV-1957261

No. of genomes 8

Genome length 18,020 bps

Completeness 100.00% (complete)

Host Gemmiger qucibialis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005918
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-01731 › vGENUS-02198 › vSUBGEN-01111 › vOTU-005918
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Gemmiger › Gemmiger qucibialis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1957261
BioSample	NA
Genome length	18,020 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	20
CDS density	83.73%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1957261_1	Structural annotation	PF17548	NA	NA
UHGV-1957261_8	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1957261_8	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-1957261_9	KOfam	K06412	spoVG; stage V sporulation protein G	NA
UHGV-1957261_9	UniRef90	UniRef90_UPI0003B64AD4	septation regulator SpoVG	NA
UHGV-1957261_9	eggNOG-mapper	1131462.DCF50_p1350	Belongs to the SpoVG family	NA
UHGV-1957261_9	Pfam	PF04026	SpoVG	SpoVG
UHGV-1957261_9	COG	COG2088	DNA-binding protein SpoVG, cell septation regulator	NA
UHGV-1957261_9	Structural annotation	PF04026, MF_00819, NF009749, COG2088	NA	NA
UHGV-1957261_10	Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	Gp5_C
UHGV-1957261_10	Structural annotation	PF12708, NF007517, COG3420	NA	NA
UHGV-1957261_11	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1957261_11	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-1957261_12	PHROG	phrog_2038	upper collar connector	connector
UHGV-1957261_12	eggNOG-mapper	338473.A6XAD7_9CAUD	Phage Connector (GP10)	NA
UHGV-1957261_12	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1957261_12	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1957261_13	PHROG	phrog_2248	tail protein	tail
UHGV-1957261_13	UniRef90	UniRef90_A0A843HU95	Caud_tail_N domain-containing protein	NA
UHGV-1957261_13	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-1957261_13	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1957261_13	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1957261_13	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1957261_14	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1957261_14	PHROG	phrog_14988	peptidase	other
UHGV-1957261_14	UniRef90	UniRef90_A0A4Q0U6L7	Peptidase_M23 domain-containing protein (Fragment)	NA
UHGV-1957261_14	eggNOG-mapper	1321778.HMPREF1982_01258	G5	NA
UHGV-1957261_14	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1957261_14	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1957261_15	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1957261_15	UniRef90	UniRef90_J9H241	Major head protein	NA
UHGV-1957261_15	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1957261_15	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1957261_18	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1957261_18	PHROG	phrog_3578	metallo-endopeptidase	other
UHGV-1957261_18	UniRef90	UniRef90_A0A348SZW4	Peptidase_M23 domain-containing protein	NA
UHGV-1957261_18	eggNOG-mapper	293614.A1C_05580	COG0739 Membrane proteins related to metalloendopeptidases	NA
UHGV-1957261_18	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1957261_18	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1957261_18	Structural annotation	PF01551, NF040883	NA	NA
UHGV-1957261_19	PHROG	phrog_199	holin	lysis
UHGV-1957261_19	UniRef90	UniRef90_A0A843HL15	Phage holin family protein	NA
UHGV-1957261_19	eggNOG-mapper	877414.ATWA01000062_gene1614	Bacteriophage holin family	NA
UHGV-1957261_19	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1957261_19	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1957261_19	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1957261_20	PHROG	phrog_2150	terminase	head and packaging
UHGV-1957261_20	UniRef90	UniRef90_A0A355RJE0	DNA encapsidation protein	NA
UHGV-1957261_20	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1957261_20	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1957261_20	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1957261	Yes	18,020 bps	37.71%	100.00%	0.9799
UHGV-0044713	No	17,856 bps	37.61%	100.00%	0.9788
UHGV-1393065	No	17,856 bps	37.61%	100.00%	0.9788
UHGV-1441921	No	17,684 bps	37.92%	100.00%	0.9780
UHGV-1396592	No	17,974 bps	37.73%	82.32%	0.9781
UHGV-0204655	No	17,911 bps	37.78%	82.03%	0.9781
UHGV-1392441	No	17,872 bps	37.81%	81.85%	0.9779
UHGV-1437663	No	17,648 bps	37.73%	80.35%	0.9785