vOTU-005946

Overview

vOTU representative UHGV-0195409

No. of genomes 30

Genome length 44,759 bps

Completeness 100.00% (complete)

Host F23-B02

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-005946
Number of genomes	30
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-01175 › vGENUS-01134 › vSUBGEN-19888 › vOTU-005946
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › F23-B02
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195409
BioSample	SAMN06164792
Genome length	44,759 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	72
CDS density	89.70%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195409_1	UniRef90	UniRef90_UPI000F0633F9	DNA-binding protein	NA
UHGV-0195409_1	eggNOG-mapper	693746.OBV_43260	NA	NA
UHGV-0195409_4	PHROG	phrog_2319	NA	unknown function
UHGV-0195409_5	PHROG	phrog_15773	NA	unknown function
UHGV-0195409_5	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-0195409_5	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0195409_5	dbAPIS	APIS008	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	NA
UHGV-0195409_6	KOfam	K01449	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0195409_6	PHROG	phrog_30550	NA	unknown function
UHGV-0195409_6	UniRef90	UniRef90_R6CIF0	Hydrolase_2 domain-containing protein	NA
UHGV-0195409_6	eggNOG-mapper	1519439.JPJG01000077_gene920	Cell Wall Hydrolase	NA
UHGV-0195409_6	Pfam	PF07486	Cell Wall Hydrolase	Hydrolase_2
UHGV-0195409_6	Structural annotation	PF07486, TIGR02869, COG3773	NA	NA
UHGV-0195409_7	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0195409_7	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0195409_7	UniRef90	UniRef90_A0A2U1CFM2	Methyltransferase	NA
UHGV-0195409_7	eggNOG-mapper	411468.CLOSCI_00299	DNA methylase	NA
UHGV-0195409_7	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0195409_7	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0195409_7	COG	COG0863	DNA modification methylase	NA
UHGV-0195409_7	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0195409_13	PHROG	phrog_38832	NA	unknown function
UHGV-0195409_13	eggNOG-mapper	1232443.BAIA02000078_gene48	NA	NA
UHGV-0195409_17	PHROG	phrog_10714	NA	unknown function
UHGV-0195409_17	Structural annotation	PF15188	NA	NA
UHGV-0195409_19	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195409_19	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0195409_19	Structural annotation	PF13560, TIGR03070, COG1396	NA	NA
UHGV-0195409_22	PHROG	phrog_18716	NA	unknown function
UHGV-0195409_22	UniRef90	UniRef90_A0A1J0GJP7	NA	NA
UHGV-0195409_22	eggNOG-mapper	665959.HMPREF1013_00856	NA	NA
UHGV-0195409_22	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0195409_22	Structural annotation	PF18909	NA	NA
UHGV-0195409_25	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0195409_25	UniRef90	UniRef90_A0A8J6P193	AAA family ATPase	NA
UHGV-0195409_25	eggNOG-mapper	1232453.BAIF02000010_gene3337	AAA domain	NA
UHGV-0195409_25	Pfam	PF13479	AAA domain	AAA_24
UHGV-0195409_25	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0195409_27	PHROG	phrog_18107	NA	unknown function
UHGV-0195409_27	eggNOG-mapper	476272.RUMHYD_02831	NA	NA
UHGV-0195409_27	Structural annotation	PF05037	NA	NA
UHGV-0195409_28	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-0195409_28	UniRef90	UniRef90_R6N0P8	ERCC4 domain-containing protein	NA
UHGV-0195409_28	eggNOG-mapper	1304866.K413DRAFT_0825	resolution of meiotic recombination intermediates	NA
UHGV-0195409_28	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-0195409_28	COG	COG1948	ERCC4-type crossover junction endonuclease	NA
UHGV-0195409_28	Structural annotation	PF02732, NF040956, COG1948	NA	NA
UHGV-0195409_29	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0195409_29	PHROG	phrog_11992	NA	unknown function
UHGV-0195409_29	UniRef90	UniRef90_A0A6N2TU46	DNA primase	NA
UHGV-0195409_29	eggNOG-mapper	1256908.HMPREF0373_03434	CHC2 zinc finger	NA
UHGV-0195409_29	PADLOC	drt-cluster192	DRT	DRT
UHGV-0195409_29	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0195409_29	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0195409_29	Structural annotation	PF01807, PF00401	NA	NA
UHGV-0195409_30	PHROG	phrog_256	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0195409_30	UniRef90	UniRef90_A0A1V5XFC1	Virulence-associated protein E	NA
UHGV-0195409_30	eggNOG-mapper	1235793.C809_02292	Virulence-associated protein E	NA
UHGV-0195409_30	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-0195409_30	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-0195409_30	Structural annotation	PF05272, MF_00016, NF005477, COG5545	NA	NA
UHGV-0195409_33	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0195409_33	UniRef90	UniRef90_UPI001D08D6B6	DNA-packaging protein	NA
UHGV-0195409_33	eggNOG-mapper	1235802.C823_05975	NA	NA
UHGV-0195409_33	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0195409_33	Structural annotation	PF16677	NA	NA
UHGV-0195409_36	Structural annotation	PF16857, MF_01553, NF010188, COG5503	NA	NA
UHGV-0195409_37	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-0195409_37	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-0195409_37	UniRef90	UniRef90_A0A352IJG9	Resolvase (Fragment)	NA
UHGV-0195409_37	eggNOG-mapper	411467.BACCAP_02922	Resolvase, N terminal domain	NA
UHGV-0195409_37	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0195409_37	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0195409_37	Structural annotation	PF00239, PF02796, NF009949, COG1961	NA	NA
UHGV-0195409_38	PHROG	phrog_1233	NA	unknown function
UHGV-0195409_38	UniRef90	UniRef90_UPI001C39EFB9	Dienelactone hydrolase family protein	NA
UHGV-0195409_38	eggNOG-mapper	1232453.BAIF02000011_gene3355	NA	NA
UHGV-0195409_39	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0195409_39	UniRef90	UniRef90_A0A810QA10	Terminase	NA
UHGV-0195409_39	eggNOG-mapper	1298920.KI911353_gene2682	TIGRFAM Phage	NA
UHGV-0195409_39	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0195409_39	COG	COG5410	NA	NA
UHGV-0195409_39	Structural annotation	PF17289, PF04466, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0195409_40	PHROG	phrog_64	portal protein	head and packaging
UHGV-0195409_40	UniRef90	UniRef90_UPI001C02F349	phage portal protein	NA
UHGV-0195409_40	eggNOG-mapper	1123263.AUKY01000015_gene1609	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0195409_40	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0195409_40	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0195409_42	PHROG	phrog_1328	major head protein	head and packaging
UHGV-0195409_42	UniRef90	UniRef90_UPI00164DD2D5	NA	NA
UHGV-0195409_42	eggNOG-mapper	665956.HMPREF1032_03619	NA	NA
UHGV-0195409_42	Pfam	PF17236	NA	DUF5309
UHGV-0195409_42	Structural annotation	PF17236, MF_04119, NF041162, COG4653	NA	NA
UHGV-0195409_43	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0195409_43	UniRef90	UniRef90_UPI00164E20D5	phage head-tail connector protein	NA
UHGV-0195409_43	eggNOG-mapper	1298920.KI911353_gene2658	NA	NA
UHGV-0195409_43	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0195409_43	Structural annotation	TIGR01560	NA	NA
UHGV-0195409_44	eggNOG-mapper	1121866.AUGK01000003_gene1432	NA	NA
UHGV-0195409_46	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-0195409_47	PHROG	phrog_158	major tail protein	tail
UHGV-0195409_47	UniRef90	UniRef90_UPI00164D954A	phage tail protein	NA
UHGV-0195409_47	eggNOG-mapper	1232453.BAIF02000058_gene1634	NA	NA
UHGV-0195409_47	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-0195409_47	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0195409_48	UniRef90	UniRef90_UPI00164D364F	NA	NA
UHGV-0195409_48	eggNOG-mapper	469596.HMPREF9488_01311	NA	NA
UHGV-0195409_48	Pfam	PF16478	NA	DUF5055
UHGV-0195409_48	Structural annotation	PF16478	NA	NA
UHGV-0195409_49	eggNOG-mapper	1211844.CBLM010000023_gene987	NA	NA
UHGV-0195409_50	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0195409_50	UniRef90	UniRef90_A0A1C6L0H4	Phage-related protein	NA
UHGV-0195409_50	eggNOG-mapper	1121866.AUGK01000003_gene1437	phage tail tape measure protein	NA
UHGV-0195409_50	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0195409_50	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0195409_51	PHROG	phrog_1194	NA	unknown function
UHGV-0195409_51	eggNOG-mapper	742740.HMPREF9474_03515	NA	NA
UHGV-0195409_51	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0195409_52	PHROG	phrog_13879	NA	unknown function
UHGV-0195409_52	eggNOG-mapper	665956.HMPREF1032_03630	NA	NA
UHGV-0195409_52	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0195409_53	PHROG	phrog_18725	NA	unknown function
UHGV-0195409_53	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0195409_55	PHROG	phrog_5302	tail protein	tail
UHGV-0195409_55	UniRef90	UniRef90_R6M197	Ig-like_bact domain-containing protein	NA
UHGV-0195409_55	eggNOG-mapper	1151292.QEW_0671	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0195409_55	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0195409_55	Structural annotation	PF14686, TIGR03000, COG1262	NA	NA
UHGV-0195409_57	UniRef90	UniRef90_R6I1X1	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	NA
UHGV-0195409_57	eggNOG-mapper	552398.HMPREF0866_01159	NA	NA
UHGV-0195409_58	PHROG	phrog_21357	endolysin	lysis
UHGV-0195409_58	UniRef90	UniRef90_UPI001BB47323	CHAP domain-containing protein	NA
UHGV-0195409_58	eggNOG-mapper	693746.OBV_22650	CHAP domain	NA
UHGV-0195409_58	Pfam	PF05257	CHAP domain	CHAP
UHGV-0195409_58	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0195409_58	Structural annotation	TIGR02594, COG3738	NA	NA
UHGV-0195409_59	PHROG	phrog_1863	NA	unknown function
UHGV-0195409_59	eggNOG-mapper	748224.HMPREF9436_01412	NA	NA
UHGV-0195409_60	PHROG	phrog_10091	holin	lysis
UHGV-0195409_60	UniRef90	UniRef90_A0A1Y4RHF4	Phage holin	NA
UHGV-0195409_60	eggNOG-mapper	445975.COLSTE_02144	Bacteriophage holin	NA
UHGV-0195409_60	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0195409_60	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0195409_60	COG	COG5546	NA	NA
UHGV-0195409_60	Structural annotation	COG5546	NA	NA
UHGV-0195409_63	PHROG	phrog_22984	NA	unknown function
UHGV-0195409_64	PHROG	phrog_16490	NA	unknown function
UHGV-0195409_65	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0195409_66	UniRef90	UniRef90_A0A7M1RTM1	RNA polymerase sigma factor/ubiquitin-like protein	NA
UHGV-0195409_66	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0195409_67	KOfam	K14059	int; integrase	NA
UHGV-0195409_67	PHROG	phrog_1	integrase	integration and excision
UHGV-0195409_67	UniRef90	UniRef90_UPI000F051A1D	tyrosine-type recombinase/integrase	NA
UHGV-0195409_67	eggNOG-mapper	693746.OBV_43340	Belongs to the 'phage' integrase family	NA
UHGV-0195409_67	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0195409_67	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0195409_67	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0195409_67	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0195409_68	UniRef90	UniRef90_A0A1Q6L177	HTH cro/C1-type domain-containing protein	NA
UHGV-0195409_68	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0195409_68	COG	COG3620	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	NA
UHGV-0195409_68	Structural annotation	PF13443, MF_00535, NF041951, COG1476	NA	NA
UHGV-0195409_69	PHROG	phrog_37750	NA	unknown function
UHGV-0195409_69	eggNOG-mapper	1449050.JNLE01000005_gene4075	NA	NA
UHGV-0195409_69	Pfam	PF12978	NA	DUF3862
UHGV-0195409_71	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0195409_71	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0195409_71	UniRef90	UniRef90_A0A3A9I218	XRE family transcriptional regulator	NA
UHGV-0195409_71	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-0195409_71	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0195409_71	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0195409_71	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195409	Yes	44,759 bps	47.96%	100.00%	0.9782
UHGV-0293884	No	43,517 bps	47.71%	100.00%	0.9808
UHGV-0169518	No	47,532 bps	47.65%	99.90%	0.9803
UHGV-1495637	No	43,582 bps	47.71%	99.90%	0.9787
UHGV-0091692	No	43,557 bps	47.87%	99.90%	0.9807
UHGV-0051603	No	42,416 bps	47.56%	97.72%	0.9802
UHGV-1471630	No	42,416 bps	47.56%	97.72%	0.9802
UHGV-0370563	No	37,483 bps	47.66%	86.37%	0.9803
UHGV-0064079	No	35,885 bps	48.00%	82.72%	0.9805
UHGV-1467940	No	35,545 bps	47.88%	81.96%	0.9809
UHGV-1507075	No	33,259 bps	47.76%	76.70%	0.9791
UHGV-0051542	No	33,118 bps	47.93%	76.36%	0.9793
UHGV-1422356	No	33,118 bps	47.93%	76.36%	0.9793
UHGV-1475132	No	31,751 bps	47.57%	73.18%	0.9809
UHGV-0050725	No	31,255 bps	47.38%	72.03%	0.9793
UHGV-1431243	No	31,255 bps	47.38%	72.03%	0.9793
UHGV-1431244	No	31,255 bps	47.38%	72.03%	0.9793
UHGV-1388320	No	30,323 bps	47.40%	69.88%	0.9789
UHGV-1391572	No	30,321 bps	47.41%	69.88%	0.9792
UHGV-1428156	No	27,249 bps	47.76%	62.80%	0.9793
UHGV-1487703	No	26,348 bps	47.05%	60.73%	0.9803
UHGV-1449463	No	24,553 bps	47.77%	54.06%	0.9811
UHGV-1562629	No	19,583 bps	47.45%	45.14%	0.9792
UHGV-1743189	No	20,448 bps	46.86%	45.04%	0.9810
UHGV-1576304	No	19,272 bps	46.48%	42.97%	0.9810
UHGV-1728451	No	14,895 bps	46.87%	33.58%	0.9818
UHGV-1774233	No	13,687 bps	47.99%	31.54%	0.9804
UHGV-1674473	No	12,604 bps	49.57%	29.03%	0.9815
UHGV-1559808	No	11,198 bps	47.66%	26.95%	0.9806
UHGV-1611423	No	11,366 bps	48.36%	26.14%	0.9796