vOTU-006089

Overview

No. of genomes 20

Genome length 40,755 bps

Completeness 100.00% (complete)

Host CAG-170 sp000432135

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006089
Number of genomes	20
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00020 › vGENUS-00177 › vSUBGEN-21665 › vOTU-006089
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170 › CAG-170 sp000432135
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0381880
BioSample	SAMEA4812184
Genome length	40,755 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	70
CDS density	91.76%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0381880_2	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0381880_3	KOfam	K14059	int; integrase	NA
UHGV-0381880_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0381880_3	UniRef90	UniRef90_UPI00195CC1EE	tyrosine-type recombinase/integrase	NA
UHGV-0381880_3	eggNOG-mapper	1235835.C814_03141	Belongs to the 'phage' integrase family	NA
UHGV-0381880_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0381880_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0381880_3	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0381880_4	UniRef90	UniRef90_A0A8D9UHA6	Helix-turn-helix XRE-family like protein	NA
UHGV-0381880_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0381880_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0381880_4	Structural annotation	PF12844	NA	NA
UHGV-0381880_6	eggNOG-mapper	1280682.AUKA01000018_gene2337	NA	NA
UHGV-0381880_6	Pfam	PF12773	Double zinc ribbon	DZR
UHGV-0381880_6	Structural annotation	PF02805	NA	NA
UHGV-0381880_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0381880_7	UniRef90	UniRef90_UPI001E54DE4F	helix-turn-helix domain-containing protein	NA
UHGV-0381880_7	eggNOG-mapper	1378168.N510_01712	NA	NA
UHGV-0381880_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0381880_7	Structural annotation	PF12844, NF007257, COG3655	NA	NA
UHGV-0381880_8	UniRef90	UniRef90_A0A1C7FQD9	Transcriptional regulator	NA
UHGV-0381880_8	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0381880_8	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0381880_9	eggNOG-mapper	1235835.C814_03153	NA	NA
UHGV-0381880_9	Structural annotation	PF09035, NF040990	NA	NA
UHGV-0381880_10	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-0381880_10	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0381880_11	Structural annotation	PF10548	NA	NA
UHGV-0381880_15	KOfam	K06236	COL1A; collagen type I alpha	NA
UHGV-0381880_15	PHROG	phrog_4433	NA	unknown function
UHGV-0381880_15	UniRef90	UniRef90_A0A1V5NWB8	Collagen triple helix repeat (20 copies)	NA
UHGV-0381880_15	eggNOG-mapper	106648.BBLJ01000054_gene3814	regulation of DNA-templated transcription, elongation	NA
UHGV-0381880_15	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0381880_15	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0381880_15	Structural annotation	NF007410	NA	NA
UHGV-0381880_16	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0381880_16	UniRef90	UniRef90_A0A1Y4W4B5	YqaJ domain-containing protein	NA
UHGV-0381880_16	eggNOG-mapper	428125.CLOLEP_01823	YqaJ viral recombinase family	NA
UHGV-0381880_16	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0381880_16	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0381880_16	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0381880_16	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0381880_17	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0381880_17	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0381880_17	UniRef90	UniRef90_A0A1Y4W4R3	Recombinase RecT	NA
UHGV-0381880_17	eggNOG-mapper	1226322.HMPREF1545_00015	RecT family	NA
UHGV-0381880_17	Pfam	PF03837	RecT family	RecT
UHGV-0381880_17	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0381880_17	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0381880_17	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0381880_18	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0381880_18	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0381880_18	UniRef90	UniRef90_R6LLA3	Single-stranded DNA-binding protein	NA
UHGV-0381880_18	eggNOG-mapper	1007096.BAGW01000007_gene1922	Single-strand binding protein family	NA
UHGV-0381880_18	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0381880_18	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0381880_18	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0381880_18	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0381880_18	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0381880_19	PHROG	phrog_16304	NA	unknown function
UHGV-0381880_19	UniRef90	UniRef90_A0A3D3Y5P0	NA	NA
UHGV-0381880_19	eggNOG-mapper	1410650.JHWL01000003_gene2848	NA	NA
UHGV-0381880_19	Pfam	PF19808	NA	DUF6291
UHGV-0381880_19	Structural annotation	PF19808	NA	NA
UHGV-0381880_21	Pfam	PF04448	NA	DUF551
UHGV-0381880_21	Structural annotation	NF041588	NA	NA
UHGV-0381880_22	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0381880_22	eggNOG-mapper	665956.HMPREF1032_03086	COG NOG12663 non supervised orthologous group	NA
UHGV-0381880_22	Structural annotation	PF11124, MF_02210, NF040502, COG3818	NA	NA
UHGV-0381880_23	PHROG	phrog_3136	NA	unknown function
UHGV-0381880_23	UniRef90	UniRef90_UPI001C02A61B	ASCH domain-containing protein	NA
UHGV-0381880_23	Pfam	PF04266	ASCH domain	ASCH
UHGV-0381880_23	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0381880_23	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0381880_24	PHROG	phrog_38832	NA	unknown function
UHGV-0381880_24	eggNOG-mapper	445972.ANACOL_00165	NA	NA
UHGV-0381880_30	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0381880_30	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-0381880_30	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0381880_34	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-0381880_34	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0381880_35	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0381880_35	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0381880_35	UniRef90	UniRef90_A0A810Q3Z7	N6_N4_Mtase domain-containing protein	NA
UHGV-0381880_35	eggNOG-mapper	1423758.BN55_01455	DNA methylase	NA
UHGV-0381880_35	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0381880_35	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0381880_35	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0381880_35	COG	COG0863	DNA modification methylase	NA
UHGV-0381880_35	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0381880_37	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0381880_37	PHROG	phrog_10250	NA	unknown function
UHGV-0381880_37	UniRef90	UniRef90_A0A1I3QR69	Phage terminase, large subunit, PBSX family	NA
UHGV-0381880_37	eggNOG-mapper	748224.HMPREF9436_03341	Phage terminase, large subunit, PBSX family	NA
UHGV-0381880_37	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0381880_37	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0381880_37	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0381880_37	COG	COG1783	Phage terminase large subunit	NA
UHGV-0381880_37	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0381880_38	PHROG	phrog_64	portal protein	head and packaging
UHGV-0381880_38	UniRef90	UniRef90_UPI001AA0B7FF	phage portal protein	NA
UHGV-0381880_38	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0381880_38	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0381880_38	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0381880_39	Structural annotation	PF10651, NF038186	NA	NA
UHGV-0381880_40	eggNOG-mapper	411471.SUBVAR_06929	ATPase involved in DNA repair	NA
UHGV-0381880_40	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-0381880_41	PHROG	phrog_18805	NA	unknown function
UHGV-0381880_41	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0381880_41	Structural annotation	PF13306	NA	NA
UHGV-0381880_42	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0381880_42	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-0381880_42	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0381880_42	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0381880_42	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0381880_42	COG	COG2369	NA	NA
UHGV-0381880_42	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0381880_43	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0381880_43	UniRef90	UniRef90_A0A7X5E1T2	HK97 gp10 family phage protein	NA
UHGV-0381880_43	eggNOG-mapper	1443125.Z962_05620	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0381880_43	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0381880_43	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0381880_43	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0381880_44	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0381880_44	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-0381880_44	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-0381880_44	Structural annotation	PF06810	NA	NA
UHGV-0381880_45	PHROG	phrog_544	major head protein	head and packaging
UHGV-0381880_45	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-0381880_45	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-0381880_45	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0381880_45	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0381880_47	PHROG	phrog_17977	NA	unknown function
UHGV-0381880_47	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0381880_47	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0381880_48	Structural annotation	PF11367	NA	NA
UHGV-0381880_49	PHROG	phrog_885	major tail protein	tail
UHGV-0381880_49	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0381880_49	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-0381880_49	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0381880_50	PHROG	phrog_18646	NA	unknown function
UHGV-0381880_52	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0381880_52	eggNOG-mapper	1123312.KB904569_gene357	Phage tail tape measure protein TP901	NA
UHGV-0381880_52	COG	COG5412	Phage-related protein	NA
UHGV-0381880_52	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-0381880_53	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0381880_54	PHROG	phrog_13879	NA	unknown function
UHGV-0381880_54	eggNOG-mapper	1122919.KB905559_gene1344	NA	NA
UHGV-0381880_54	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0381880_55	PHROG	phrog_18725	NA	unknown function
UHGV-0381880_55	eggNOG-mapper	693746.OBV_18220	NA	NA
UHGV-0381880_56	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0381880_56	Structural annotation	PF20055, MF_03008, NF010730, COG3940	NA	NA
UHGV-0381880_57	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0381880_57	Structural annotation	PF07484	NA	NA
UHGV-0381880_60	PHROG	phrog_6918	holin	lysis
UHGV-0381880_60	UniRef90	UniRef90_A0A316QCY7	Holin	NA
UHGV-0381880_60	eggNOG-mapper	1297617.JPJD01000020_gene301	Bacteriophage holin of superfamily 6 (Holin_LLH)	NA
UHGV-0381880_60	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-0381880_60	Structural annotation	PF09682, TIGR01673	NA	NA
UHGV-0381880_61	PHROG	phrog_14030	NA	unknown function
UHGV-0381880_61	UniRef90	UniRef90_R6LL81	SLH domain-containing protein	NA
UHGV-0381880_61	eggNOG-mapper	1121866.AUGK01000003_gene1444	amidase activity	NA
UHGV-0381880_61	COG	COG1705	Flagellum-specific peptidoglycan hydrolase FlgJ	NA
UHGV-0381880_62	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0381880_64	eggNOG-mapper	1160721.RBI_I00206	NA	NA
UHGV-0381880_64	Structural annotation	PF10723	NA	NA
UHGV-0381880_65	PHROG	phrog_3754	NA	unknown function
UHGV-0381880_65	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0381880_66	PHROG	phrog_21718	NA	unknown function
UHGV-0381880_66	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0381880_67	PHROG	phrog_22984	NA	unknown function
UHGV-0381880_68	PHROG	phrog_16490	NA	unknown function
UHGV-0381880_68	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0381880_69	PHROG	phrog_20016	NA	unknown function
UHGV-0381880_69	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0381880_69	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0381880_69	Structural annotation	PF18573, NF033147	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0381880	Yes	40,755 bps	53.92%	100.00%	0.9824
UHGV-2139970	No	40,026 bps	54.02%	100.00%	0.9824
UHGV-1378771	No	41,231 bps	54.01%	99.97%	0.9829
UHGV-2128554	No	41,368 bps	54.05%	99.90%	0.9817
UHGV-1464102	No	41,360 bps	53.75%	99.90%	0.9827
UHGV-0213666	No	41,281 bps	53.71%	99.90%	0.9827
UHGV-0100492	No	34,739 bps	54.49%	84.60%	0.9832
UHGV-0095023	No	27,442 bps	54.68%	66.76%	0.9830
UHGV-1419681	No	24,231 bps	54.47%	58.94%	0.9831
UHGV-1422381	No	24,184 bps	54.23%	58.88%	0.9833
UHGV-0161102	No	21,678 bps	53.75%	52.74%	0.9821
UHGV-1651447	No	17,086 bps	53.47%	41.58%	0.9831
UHGV-1798082	No	15,865 bps	53.37%	38.15%	0.9813
UHGV-0885919	No	13,969 bps	54.38%	33.96%	0.9833
UHGV-1774425	No	13,900 bps	54.09%	33.48%	0.9815
UHGV-1667051	No	12,516 bps	53.27%	30.12%	0.9821
UHGV-1865195	No	11,447 bps	52.22%	27.96%	0.9834
UHGV-1710090	No	10,486 bps	53.71%	25.63%	0.9829
UHGV-1713129	No	10,500 bps	54.96%	25.29%	0.9832
UHGV-0083389	No	10,032 bps	53.72%	24.52%	0.9821