vOTU-006346

Overview

vOTU representative UHGV-1372022

No. of genomes 3

Genome length 36,458 bps

Completeness 100.00% (complete)

Host HGM13006

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006346
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-02710 › vGENUS-03462 › vSUBGEN-02841 › vOTU-006346
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › HGM13006
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1372022
BioSample	NA
Genome length	36,458 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	58
CDS density	91.32%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1372022_1	Structural annotation	PF13560, TIGR03070, COG3655	NA	NA
UHGV-1372022_2	KOfam	K14059	int; integrase	NA
UHGV-1372022_2	PHROG	phrog_1	integrase	integration and excision
UHGV-1372022_2	UniRef90	UniRef90_UPI00195CC1EE	tyrosine-type recombinase/integrase	NA
UHGV-1372022_2	eggNOG-mapper	1235835.C814_03141	Belongs to the 'phage' integrase family	NA
UHGV-1372022_2	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-1372022_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1372022_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1372022_2	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-1372022_3	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-1372022_4	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1372022_5	PHROG	phrog_16490	NA	unknown function
UHGV-1372022_5	eggNOG-mapper	397290.C810_05212	NA	NA
UHGV-1372022_6	PHROG	phrog_22984	NA	unknown function
UHGV-1372022_10	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-1372022_10	PHROG	phrog_2104	NA	unknown function
UHGV-1372022_10	UniRef90	UniRef90_A0A355NLF8	DNA-binding protein	NA
UHGV-1372022_10	eggNOG-mapper	1219375.CM002139_gene2520	Helix-turn-helix XRE-family like proteins	NA
UHGV-1372022_10	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1372022_10	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-1372022_11	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1372022_11	UniRef90	UniRef90_A0A1I3T111	AP2 domain-containing protein	NA
UHGV-1372022_11	eggNOG-mapper	478749.BRYFOR_05054	AP2 domain protein	NA
UHGV-1372022_11	Structural annotation	PF18337, PF00847	NA	NA
UHGV-1372022_12	UniRef90	UniRef90_A0A350H2J1	HTH luxR-type domain-containing protein	NA
UHGV-1372022_12	Structural annotation	PF13404, TIGR01636	NA	NA
UHGV-1372022_13	PHROG	phrog_9589	endolysin	lysis
UHGV-1372022_13	UniRef90	UniRef90_A0A7X5CR20	CHAP domain-containing protein	NA
UHGV-1372022_13	eggNOG-mapper	1298920.KI911353_gene4832	Peptidoglycan-binding domain 1 protein	NA
UHGV-1372022_13	Pfam	PF05257	CHAP domain	CHAP
UHGV-1372022_13	Pfam	PF19127	Choline-binding repeat	Choline_bind_3
UHGV-1372022_13	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-1372022_13	Structural annotation	PF19127, PF05382, TIGR04035, NF008096, COG5263, COG3942	NA	NA
UHGV-1372022_14	PHROG	phrog_199	holin	lysis
UHGV-1372022_14	UniRef90	UniRef90_UPI001C109117	phage holin family protein	NA
UHGV-1372022_14	eggNOG-mapper	1111121.HMPREF1247_0008	Bacteriophage holin family	NA
UHGV-1372022_14	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1372022_14	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1372022_14	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1372022_17	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-1372022_18	PHROG	phrog_18110	NA	unknown function
UHGV-1372022_18	UniRef90	UniRef90_UPI00189BED7C	phage tail protein	NA
UHGV-1372022_18	eggNOG-mapper	1120933.ATUY01000004_gene1009	Prophage endopeptidase tail	NA
UHGV-1372022_18	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1372022_18	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1372022_18	COG	COG4926	Phage-related protein	NA
UHGV-1372022_18	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-1372022_19	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1372022_19	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-1372022_20	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-1372022_20	eggNOG-mapper	742740.HMPREF9474_01203	Phage tail tape measure protein, TP901 family	NA
UHGV-1372022_20	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1372022_20	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1372022_20	COG	COG5280	Phage-related minor tail protein	NA
UHGV-1372022_20	Structural annotation	PF10145, COG5280	NA	NA
UHGV-1372022_21	PHROG	phrog_706	NA	unknown function
UHGV-1372022_21	UniRef90	UniRef90_UPI0006828F20	Gp15 family bacteriophage protein	NA
UHGV-1372022_21	eggNOG-mapper	411460.RUMTOR_02091	COG NOG24969 non supervised orthologous group	NA
UHGV-1372022_21	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1372022_21	Structural annotation	PF06854	NA	NA
UHGV-1372022_22	Structural annotation	PF10666	NA	NA
UHGV-1372022_23	PHROG	phrog_820	major tail protein	tail
UHGV-1372022_23	eggNOG-mapper	665956.HMPREF1032_02945	NA	NA
UHGV-1372022_23	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1372022_24	PHROG	phrog_3266	tail completion	connector
UHGV-1372022_24	UniRef90	UniRef90_UPI000F637EFF	chloramphenicol resistance protein	NA
UHGV-1372022_24	eggNOG-mapper	641112.ACOK01000073_gene2899	NA	NA
UHGV-1372022_24	Structural annotation	PF12691	NA	NA
UHGV-1372022_25	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1372022_25	UniRef90	UniRef90_UPI000F63A4E5	minor capsid protein	NA
UHGV-1372022_25	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1372022_25	Structural annotation	PF11114	NA	NA
UHGV-1372022_26	PHROG	phrog_3366	NA	unknown function
UHGV-1372022_26	eggNOG-mapper	645991.Sgly_0343	NA	NA
UHGV-1372022_26	Structural annotation	PF20536, TIGR02126	NA	NA
UHGV-1372022_27	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1372022_27	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-1372022_28	PHROG	phrog_422	major head protein	head and packaging
UHGV-1372022_28	eggNOG-mapper	693746.OBV_18090	NA	NA
UHGV-1372022_28	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1372022_29	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1372022_29	UniRef90	UniRef90_UPI000B35FF41	phage scaffolding protein	NA
UHGV-1372022_29	eggNOG-mapper	663278.Ethha_0497	NA	NA
UHGV-1372022_29	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1372022_29	Structural annotation	PF06810	NA	NA
UHGV-1372022_31	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1372022_31	UniRef90	UniRef90_UPI0006832D02	phage minor capsid protein	NA
UHGV-1372022_31	eggNOG-mapper	936375.HMPREF1152_1071	NA	NA
UHGV-1372022_31	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1372022_31	COG	COG2369	NA	NA
UHGV-1372022_31	Structural annotation	PF06152, PF12106	NA	NA
UHGV-1372022_32	PHROG	phrog_533	portal protein	head and packaging
UHGV-1372022_32	UniRef90	UniRef90_A0A173Y8E3	Phage portal protein, putative, A118 family	NA
UHGV-1372022_32	eggNOG-mapper	641112.ACOK01000073_gene2889	NA	NA
UHGV-1372022_32	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1372022_32	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1372022_33	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1372022_33	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-1372022_33	UniRef90	UniRef90_R5AG08	Phage terminase	NA
UHGV-1372022_33	eggNOG-mapper	411471.SUBVAR_06507	Phage terminase, large subunit, PBSX family	NA
UHGV-1372022_33	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1372022_33	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1372022_33	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1372022_33	COG	COG1783	Phage terminase large subunit	NA
UHGV-1372022_33	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1372022_34	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-1372022_34	UniRef90	UniRef90_A0A1C7FRC2	Transposase	NA
UHGV-1372022_34	eggNOG-mapper	1408437.JNJN01000045_gene597	HNH endonuclease	NA
UHGV-1372022_34	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-1372022_34	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-1372022_34	Structural annotation	PF07141	NA	NA
UHGV-1372022_35	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1372022_35	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1372022_35	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-1372022_37	PHROG	phrog_38832	NA	unknown function
UHGV-1372022_37	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-1372022_38	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1372022_38	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1372022_38	UniRef90	UniRef90_A0A1Y4LU27	Adenylyl-sulfate reductase	NA
UHGV-1372022_38	eggNOG-mapper	1408437.JNJN01000032_gene2312	Phosphoadenosine phosphosulfate reductase	NA
UHGV-1372022_38	PADLOC	BrxP_00001	BrxP	BREX
UHGV-1372022_38	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1372022_38	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1372022_38	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-1372022_42	PHROG	phrog_5810	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1372022_42	UniRef90	UniRef90_UPI00164BB1D1	transcriptional regulator	NA
UHGV-1372022_42	eggNOG-mapper	411490.ANACAC_00800	NA	NA
UHGV-1372022_42	Structural annotation	PF01978, MF_01819, NF041413, COG0735	NA	NA
UHGV-1372022_43	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1372022_43	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-1372022_43	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-1372022_44	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1372022_44	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1372022_44	UniRef90	UniRef90_A0A2V2CEG7	Single-stranded DNA-binding protein	NA
UHGV-1372022_44	eggNOG-mapper	693746.OBV_12860	Single-strand binding protein family	NA
UHGV-1372022_44	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1372022_44	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1372022_44	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1372022_44	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1372022_44	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1372022_45	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1372022_45	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1372022_45	UniRef90	UniRef90_U2SBP2	Recombination and repair protein RecT	NA
UHGV-1372022_45	eggNOG-mapper	1226322.HMPREF1545_00015	RecT family	NA
UHGV-1372022_45	Pfam	PF03837	RecT family	RecT
UHGV-1372022_45	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1372022_45	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1372022_45	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-1372022_46	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1372022_46	UniRef90	UniRef90_UPI001BB47349	YqaJ viral recombinase family protein	NA
UHGV-1372022_46	eggNOG-mapper	1226322.HMPREF1545_00014	YqaJ viral recombinase family	NA
UHGV-1372022_46	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-1372022_46	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-1372022_46	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-1372022_46	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-1372022_47	Structural annotation	PF00412	NA	NA
UHGV-1372022_48	PHROG	phrog_5070	NA	unknown function
UHGV-1372022_48	UniRef90	UniRef90_C5S0X2	Phage related protein	NA
UHGV-1372022_48	eggNOG-mapper	887929.HMP0721_1276	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-1372022_48	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-1372022_50	UniRef90	UniRef90_UPI000F0633F9	DNA-binding protein	NA
UHGV-1372022_50	eggNOG-mapper	693746.OBV_43260	NA	NA
UHGV-1372022_50	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-1372022_54	Structural annotation	COG4451	NA	NA
UHGV-1372022_55	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1372022_55	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1372022_55	UniRef90	UniRef90_A0A1C5PSE5	Predicted transcriptional regulator	NA
UHGV-1372022_55	eggNOG-mapper	97138.C820_01960	Helix-turn-helix XRE-family like proteins	NA
UHGV-1372022_55	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1372022_55	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1372022_55	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1372022_56	UniRef90	UniRef90_A0A3E2TDP9	Zinc ribbon domain-containing protein	NA
UHGV-1372022_56	eggNOG-mapper	743718.Isova_0870	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1372022	Yes	36,458 bps	53.82%	100.00%	0.9817
UHGV-0084593	No	36,458 bps	53.82%	100.00%	0.9819
UHGV-0181307	No	36,458 bps	53.82%	100.00%	0.9815