vOTU-006352

Overview

vOTU representative UHGV-2039649

No. of genomes 29

Genome length 84,832 bps

Completeness 100.00% (complete)

Host Prevotella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006352
Number of genomes	29
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 › vSUBFAM-00291 › vGENUS-01842 › vSUBGEN-05585 › vOTU-006352
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Bacteroidaceae › Prevotella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2039649
BioSample	SAMN05971427
Genome length	84,832 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	110
CDS density	82.45%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2039649_1	PHROG	phrog_1383	virion structural protein	head and packaging
UHGV-2039649_1	UniRef90	UniRef90_R6U473	Gp142	NA
UHGV-2039649_1	eggNOG-mapper	1327935.A0A060AD14_9CAUD	NA	NA
UHGV-2039649_1	Structural annotation	COG1704	NA	NA
UHGV-2039649_2	PHROG	phrog_2087	NA	unknown function
UHGV-2039649_2	eggNOG-mapper	1410653.JHVC01000005_gene2495	NA	NA
UHGV-2039649_4	PHROG	phrog_1365	NA	unknown function
UHGV-2039649_7	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2039649_7	UniRef90	UniRef90_A0A533R9G2	Holliday junction endonuclease	NA
UHGV-2039649_7	eggNOG-mapper	742727.HMPREF9447_04887	NA	NA
UHGV-2039649_7	Structural annotation	PF16921, MF_00034, NF000711, COG0817	NA	NA
UHGV-2039649_9	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-2039649_9	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-2039649_9	UniRef90	UniRef90_UPI001C2C5599	NA	NA
UHGV-2039649_9	eggNOG-mapper	1236504.HMPREF2132_11050	Phage plasmid primase, P4 family domain protein	NA
UHGV-2039649_9	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-2039649_9	Pfam	PF19263	NA	DUF5906
UHGV-2039649_9	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-2039649_9	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-2039649_9	Structural annotation	PF04735, MF_04000, TIGR01613, COG3378	NA	NA
UHGV-2039649_10	eggNOG-mapper	1236504.HMPREF2132_11225	NA	NA
UHGV-2039649_13	eggNOG-mapper	1236504.HMPREF2132_11155	NA	NA
UHGV-2039649_13	Structural annotation	PF06152, TIGR01641	NA	NA
UHGV-2039649_14	PHROG	phrog_64	portal protein	head and packaging
UHGV-2039649_14	UniRef90	UniRef90_A0A3R6JWS0	Phage portal protein	NA
UHGV-2039649_14	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2039649_14	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-2039649_15	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2039649_15	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-2039649_15	UniRef90	UniRef90_A0A6A7W1V0	Terminase	NA
UHGV-2039649_15	eggNOG-mapper	1236504.HMPREF2132_11175	Terminase-like family	NA
UHGV-2039649_15	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2039649_15	COG	COG5362	Phage terminase large subunit	NA
UHGV-2039649_15	Structural annotation	PF04466, PF17289, MF_04145, TIGR01547, COG5323	NA	NA
UHGV-2039649_18	Structural annotation	PF21430	NA	NA
UHGV-2039649_19	PHROG	phrog_29	major head protein	head and packaging
UHGV-2039649_19	UniRef90	UniRef90_A0A8B2AWS5	Major capsid protein	NA
UHGV-2039649_19	Structural annotation	PF03864, MF_04133, TIGR04387, COG4834	NA	NA
UHGV-2039649_20	eggNOG-mapper	1236504.HMPREF2132_11200	NA	NA
UHGV-2039649_20	Structural annotation	PF20449	NA	NA
UHGV-2039649_21	Structural annotation	PF19586, TIGR01563, COG5614	NA	NA
UHGV-2039649_22	PHROG	phrog_5377	NA	unknown function
UHGV-2039649_23	eggNOG-mapper	742727.HMPREF9447_04835	NA	NA
UHGV-2039649_23	Structural annotation	PF06141	NA	NA
UHGV-2039649_24	Structural annotation	PF08813, TIGR01603, COG5437	NA	NA
UHGV-2039649_25	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-2039649_25	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-2039649_25	UniRef90	UniRef90_A0A415VJ71	TMP_3 domain-containing protein	NA
UHGV-2039649_25	eggNOG-mapper	742727.HMPREF9447_04839	tape measure	NA
UHGV-2039649_25	COG	COG1511	NA	NA
UHGV-2039649_26	PHROG	phrog_10156	NA	unknown function
UHGV-2039649_26	eggNOG-mapper	742727.HMPREF9447_04840	NA	NA
UHGV-2039649_27	eggNOG-mapper	1236504.HMPREF2132_11265	NA	NA
UHGV-2039649_27	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-2039649_28	PHROG	phrog_17422	NA	unknown function
UHGV-2039649_28	eggNOG-mapper	1121100.JCM6294_565	Phage minor structural protein	NA
UHGV-2039649_28	COG	COG4926	Phage-related protein	NA
UHGV-2039649_28	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2039649_29	Structural annotation	PF14545	NA	NA
UHGV-2039649_30	eggNOG-mapper	742738.HMPREF9460_03963	tail collar domain protein	NA
UHGV-2039649_30	COG	COG4675	Phage tail collar domain	NA
UHGV-2039649_32	KOfam	K02395	flgJ; peptidoglycan hydrolase FlgJ	NA
UHGV-2039649_32	PHROG	phrog_3513	endolysin	lysis
UHGV-2039649_32	UniRef90	UniRef90_A0A415DT58	Flagellar biosynthesis protein FlgJ	NA
UHGV-2039649_32	eggNOG-mapper	1121100.JCM6294_556	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-2039649_32	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-2039649_32	COG	COG1705	Flagellum-specific peptidoglycan hydrolase FlgJ	NA
UHGV-2039649_32	Structural annotation	PF01832, TIGR02541, COG1705	NA	NA
UHGV-2039649_33	UniRef90	UniRef90_UPI001F20F464	phage holin family protein	NA
UHGV-2039649_33	eggNOG-mapper	1121097.JCM15093_2703	NA	NA
UHGV-2039649_33	Structural annotation	NF035928	NA	NA
UHGV-2039649_36	UniRef90	UniRef90_UPI001C2B78AF	helix-turn-helix domain-containing protein	NA
UHGV-2039649_36	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2039649_36	Structural annotation	PF05930, NF033499, COG3311	NA	NA
UHGV-2039649_37	UniRef90	UniRef90_UPI000E481466	NA	NA
UHGV-2039649_38	UniRef90	UniRef90_A0A7M1RY91	Nuclear pore complex-like protein	NA
UHGV-2039649_42	PHROG	phrog_5781	NA	unknown function
UHGV-2039649_42	UniRef90	UniRef90_UPI001C2CB487	NA	NA
UHGV-2039649_42	eggNOG-mapper	1236504.HMPREF2132_11460	NA	NA
UHGV-2039649_42	Pfam	PF14359	NA	DUF4406
UHGV-2039649_42	Structural annotation	PF14359, MF_03036, NF003642, COG3613	NA	NA
UHGV-2039649_43	KOfam	K06941	rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]	NA
UHGV-2039649_43	PHROG	phrog_24834	NA	unknown function
UHGV-2039649_43	UniRef90	UniRef90_UPI001C2C0634	Fe-S-oxidoreductase	NA
UHGV-2039649_43	eggNOG-mapper	449673.BACSTE_02201	rRNA (adenine-C2-)-methyltransferase activity	NA
UHGV-2039649_43	COG	COG0820	Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37	NA
UHGV-2039649_43	Structural annotation	MF_01849, TIGR00048, COG0820	NA	NA
UHGV-2039649_46	PHROG	phrog_98	NA	unknown function
UHGV-2039649_46	UniRef90	UniRef90_A0A413NPN2	YopX domain-containing protein	NA
UHGV-2039649_46	eggNOG-mapper	888059.HMPREF9071_2108	YopX protein	NA
UHGV-2039649_46	Pfam	PF09643	YopX protein	YopX
UHGV-2039649_46	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-2039649_50	Structural annotation	PF09465, NF005100	NA	NA
UHGV-2039649_54	eggNOG-mapper	575615.HMPREF0670_02891	Transposase and inactivated derivatives	NA
UHGV-2039649_54	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-2039649_57	PHROG	phrog_874	NA	unknown function
UHGV-2039649_57	eggNOG-mapper	762968.HMPREF9441_00541	NA	NA
UHGV-2039649_57	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-2039649_61	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-2039649_61	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-2039649_62	PHROG	phrog_3163	NA	unknown function
UHGV-2039649_69	PHROG	phrog_10469	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2039649_69	UniRef90	UniRef90_UPI001C2BDF1D	NA	NA
UHGV-2039649_69	eggNOG-mapper	1122985.HMPREF1991_02243	DNA-binding transcription factor activity	NA
UHGV-2039649_69	Pfam	PF19808	NA	DUF6291
UHGV-2039649_69	COG	COG2188	DNA-binding transcriptional regulator, GntR family	NA
UHGV-2039649_69	Structural annotation	PF19808	NA	NA
UHGV-2039649_70	PHROG	phrog_4932	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2039649_70	UniRef90	UniRef90_A0A374CIY2	NA	NA
UHGV-2039649_70	eggNOG-mapper	1235811.HMPREF0653_02579	NA	NA
UHGV-2039649_70	Pfam	PF11325	NA	DUF3127
UHGV-2039649_70	Structural annotation	PF11325, MF_00720, NF005241, COG2965	NA	NA
UHGV-2039649_71	KOfam	K01143	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	NA
UHGV-2039649_71	PHROG	phrog_149	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2039649_71	UniRef90	UniRef90_UPI001C2BD1AC	YqaJ viral recombinase family protein	NA
UHGV-2039649_71	eggNOG-mapper	411901.BACCAC_02351	YqaJ-like viral recombinase domain	NA
UHGV-2039649_71	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-2039649_71	Structural annotation	TIGR03033, COG5377	NA	NA
UHGV-2039649_72	PHROG	phrog_3657	NA	unknown function
UHGV-2039649_72	eggNOG-mapper	1211813.CAPH01000015_gene728	NA	NA
UHGV-2039649_72	Structural annotation	PF04404	NA	NA
UHGV-2039649_74	PHROG	phrog_19572	NA	unknown function
UHGV-2039649_74	UniRef90	UniRef90_A0A255T9K5	Phage tail protein	NA
UHGV-2039649_74	eggNOG-mapper	264731.PRU_1298	COG NOG14445 non supervised orthologous group	NA
UHGV-2039649_74	Pfam	PF14902	NA	DUF4494
UHGV-2039649_74	Structural annotation	PF14902	NA	NA
UHGV-2039649_75	Structural annotation	PF02796, NF040595, COG2207	NA	NA
UHGV-2039649_78	UniRef90	UniRef90_UPI001C2B7BE2	helix-turn-helix domain-containing protein	NA
UHGV-2039649_78	eggNOG-mapper	421072.IO89_10630	Helix-turn-helix domain	NA
UHGV-2039649_78	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2039649_78	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-2039649_79	UniRef90	UniRef90_UPI001180215C	helix-turn-helix domain-containing protein	NA
UHGV-2039649_80	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2039649_80	PHROG	phrog_2328	transcriptional repressor	transcription regulation
UHGV-2039649_80	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2039649_80	Structural annotation	PF12844, MF_02017, NF041951, COG1396	NA	NA
UHGV-2039649_81	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-2039649_81	PHROG	phrog_1	integrase	integration and excision
UHGV-2039649_81	UniRef90	UniRef90_UPI001C2B82E9	phage integrase SAM-like domain-containing protein	NA
UHGV-2039649_81	eggNOG-mapper	1236504.HMPREF2132_10965	Belongs to the 'phage' integrase family	NA
UHGV-2039649_81	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-2039649_81	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2039649_81	Structural annotation	PF17293, PF13102, PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2039649_83	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-2039649_83	PHROG	phrog_1	integrase	integration and excision
UHGV-2039649_83	UniRef90	UniRef90_UPI001C2B9299	tyrosine-type recombinase/integrase	NA
UHGV-2039649_83	eggNOG-mapper	1236504.HMPREF2132_10995	Belongs to the 'phage' integrase family	NA
UHGV-2039649_83	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2039649_83	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2039649_83	Structural annotation	PF00589, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-2039649_87	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-2039649_87	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-2039649_87	UniRef90	UniRef90_A0A3R6E8G8	Reverse transcriptase domain-containing protein	NA
UHGV-2039649_87	eggNOG-mapper	445970.ALIPUT_02574	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-2039649_87	PADLOC	drt-UG27	DRT	DRT
UHGV-2039649_87	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-2039649_87	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-2039649_87	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-2039649_88	UniRef90	UniRef90_A0A3R6KQ20	Ubiquitin carboxyl-hydrolase	NA
UHGV-2039649_88	eggNOG-mapper	547042.BACCOPRO_02126	NA	NA
UHGV-2039649_88	PADLOC	drt-cluster337	DRT	DRT
UHGV-2039649_89	eggNOG-mapper	445970.ALIPUT_02571	NA	NA
UHGV-2039649_89	PADLOC	drt-cluster346	DRT	DRT
UHGV-2039649_90	UniRef90	UniRef90_A0A3R6DUZ5	Protein dpnD	NA
UHGV-2039649_90	Pfam	PF14207	DpnD/PcfM-like protein	DpnD-PcfM
UHGV-2039649_90	Structural annotation	PF14207	NA	NA
UHGV-2039649_92	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-2039649_92	PHROG	phrog_5696	NA	unknown function
UHGV-2039649_92	UniRef90	UniRef90_A0A5B2TVV4	N-6 DNA methylase	NA
UHGV-2039649_92	eggNOG-mapper	761193.Runsl_0332	N-6 DNA Methylase	NA
UHGV-2039649_92	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-2039649_92	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-2039649_92	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-2039649_92	Structural annotation	COG0286	NA	NA
UHGV-2039649_93	KOfam	K01258	pepT; tripeptide aminopeptidase [EC:3.4.11.4]	NA
UHGV-2039649_93	PHROG	phrog_4191	peptidase	other
UHGV-2039649_93	UniRef90	UniRef90_A0A6I7M9Z1	Acetyl-lysine deacetylase	NA
UHGV-2039649_93	eggNOG-mapper	742817.HMPREF9449_00545	NA	NA
UHGV-2039649_93	COG	COG2195	Di- or tripeptidase	NA
UHGV-2039649_94	eggNOG-mapper	1122971.BAME01000099_gene5811	NA	NA
UHGV-2039649_94	Structural annotation	NF000034, COG3375	NA	NA
UHGV-2039649_100	KOfam	K03555	mutS; DNA mismatch repair protein MutS	NA
UHGV-2039649_100	PHROG	phrog_8439	NA	unknown function
UHGV-2039649_100	UniRef90	UniRef90_A0A7Y2BYG6	DNA mismatch repair protein MutS (Fragment)	NA
UHGV-2039649_100	eggNOG-mapper	1077285.AGDG01000023_gene1043	NA	NA
UHGV-2039649_100	Pfam	PF01624	MutS domain I	MutS_I
UHGV-2039649_100	COG	COG0249	DNA mismatch repair ATPase MutS	NA
UHGV-2039649_100	Structural annotation	PF01624	NA	NA
UHGV-2039649_101	eggNOG-mapper	1515615.HQ41_08200	COG NOG33922 non supervised orthologous group	NA
UHGV-2039649_105	Structural annotation	PF20612	NA	NA
UHGV-2039649_109	PHROG	phrog_1485	NA	unknown function
UHGV-2039649_109	UniRef90	UniRef90_UPI001C2C3223	nucleotide modification associated domain-containing protein	NA
UHGV-2039649_109	eggNOG-mapper	240302.BN982_00203	NA	NA
UHGV-2039649_109	Pfam	PF07659	Nucleotide modification associated domain 1	DUF1599
UHGV-2039649_110	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2039649_110	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-2039649_110	UniRef90	UniRef90_UPI001C2C6E49	phage antirepressor KilAC domain-containing protein	NA
UHGV-2039649_110	eggNOG-mapper	12336.Q331V6_CBCP	DNA binding	NA
UHGV-2039649_110	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-2039649_110	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2039649_110	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-2039649_110	Structural annotation	PF03374, PF09669, TIGR02681, COG3645	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2039649	Yes	84,832 bps	48.60%	100.00%	0.9764
UHGV-0278931	No	84,724 bps	48.58%	100.00%	0.9773
UHGV-0159598	No	89,655 bps	48.68%	99.90%	0.9735
UHGV-2033270	No	88,113 bps	48.51%	99.90%	0.9745
UHGV-2079451	No	85,674 bps	48.54%	99.90%	0.9744
UHGV-2039480	No	84,957 bps	48.59%	99.90%	0.9767
UHGV-1334061	No	83,930 bps	49.09%	99.15%	0.9758
UHGV-1509080	No	64,284 bps	48.71%	76.04%	0.9796
UHGV-0781721	No	54,707 bps	50.01%	64.98%	0.9774
UHGV-0304071	No	52,518 bps	50.23%	62.54%	0.9768
UHGV-0231427	No	48,811 bps	49.21%	57.77%	0.9788
UHGV-1479722	No	46,573 bps	49.68%	55.08%	0.9787
UHGV-0261336	No	46,570 bps	49.68%	55.07%	0.9800
UHGV-0149559	No	43,206 bps	50.30%	50.65%	0.9809
UHGV-1453560	No	43,184 bps	50.30%	50.63%	0.9815
UHGV-0203288	No	40,822 bps	48.57%	48.54%	0.9780
UHGV-0192178	No	19,517 bps	51.80%	22.91%	0.9812
UHGV-1597802	No	19,413 bps	51.74%	22.79%	0.9810
UHGV-0164302	No	19,253 bps	48.92%	22.67%	0.9594
UHGV-1699307	No	17,234 bps	47.80%	20.43%	0.9725
UHGV-1661587	No	17,003 bps	47.92%	20.06%	0.9738
UHGV-1595903	No	16,541 bps	48.55%	19.46%	0.9668
UHGV-1602379	No	16,458 bps	48.57%	19.37%	0.9665
UHGV-1576092	No	16,301 bps	48.52%	19.19%	0.9629
UHGV-1725837	No	14,918 bps	48.53%	17.72%	0.9528
UHGV-0148917	No	13,080 bps	47.84%	15.42%	0.9764
UHGV-1558639	No	11,251 bps	49.32%	13.29%	0.9689
UHGV-0824680	No	10,751 bps	50.13%	12.71%	0.9698
UHGV-1616231	No	10,388 bps	49.61%	12.27%	0.9550