vOTU-006412

Overview

No. of genomes 8

Genome length 48,689 bps

Completeness 100.00% (complete)

Host Cryptobacteroides sp900541925

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006412
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-06740 › vGENUS-17504 › vSUBGEN-32549 › vOTU-006412
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › UBA932 › Cryptobacteroides › Cryptobacteroides sp900541925
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1372816
BioSample	SAMN03418258
Genome length	48,689 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	64
CDS density	83.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1372816_1	PHROG	phrog_645	Rnase E	DNA, RNA and nucleotide metabolism
UHGV-1372816_1	UniRef90	UniRef90_A0A7U3MW83	RNA polymerase sigma factor	NA
UHGV-1372816_1	eggNOG-mapper	99179.B5TRC1_9CAUD	NA	NA
UHGV-1372816_2	UniRef90	UniRef90_UPI0013D2BFC4	transglycosylase SLT domain-containing protein	NA
UHGV-1372816_2	eggNOG-mapper	679189.HMPREF9019_1093	lytic transglycosylase activity	NA
UHGV-1372816_2	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1372816_2	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-1372816_4	PHROG	phrog_625	NA	unknown function
UHGV-1372816_4	UniRef90	UniRef90_A0A6I1RWR8	ASCH domain-containing protein	NA
UHGV-1372816_4	eggNOG-mapper	926549.KI421517_gene2497	NA	NA
UHGV-1372816_9	PHROG	phrog_3543	NA	unknown function
UHGV-1372816_9	eggNOG-mapper	1196031.ALEG01000041_gene2681	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein	NA
UHGV-1372816_9	COG	COG0664	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases	NA
UHGV-1372816_9	Structural annotation	PF12098, MF_01160, NF041095, COG1993	NA	NA
UHGV-1372816_11	PHROG	phrog_7245	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UHGV-1372816_11	UniRef90	UniRef90_UPI000E43D63B	zincin-like metallopeptidase domain-containing protein	NA
UHGV-1372816_11	eggNOG-mapper	97139.C824_00155	NA	NA
UHGV-1372816_11	Pfam	PF08401	N-terminal domain of anti-restriction factor ArdC	ArdcN
UHGV-1372816_11	Pfam	PF18818	Zincin-like metallopeptidase	MPTase-PolyVal
UHGV-1372816_11	COG	COG4227	Antirestriction protein ArdC	NA
UHGV-1372816_11	Structural annotation	PF18818, PF08401, COG4227	NA	NA
UHGV-1372816_13	KOfam	K02313	dnaA; chromosomal replication initiator protein	NA
UHGV-1372816_13	Pfam	PF08299	Bacterial dnaA protein helix-turn-helix	Bac_DnaA_C
UHGV-1372816_13	COG	COG0593	Chromosomal replication initiation ATPase DnaA	NA
UHGV-1372816_15	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-1372816_15	PHROG	phrog_47	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1372816_15	eggNOG-mapper	485918.Cpin_6451	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	NA
UHGV-1372816_15	PADLOC	drt-UG29	DRT	DRT
UHGV-1372816_15	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-1372816_15	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-1372816_17	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-1372816_17	UniRef90	UniRef90_A0A095Z6H0	MazG domain-containing protein	NA
UHGV-1372816_17	eggNOG-mapper	1236504.HMPREF2132_01780	Mazg nucleotide pyrophosphohydrolase	NA
UHGV-1372816_17	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-1372816_17	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-1372816_17	Structural annotation	TIGR03188, COG1694	NA	NA
UHGV-1372816_18	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1372816_18	UniRef90	UniRef90_A0A1F0RIH5	Endonuclease	NA
UHGV-1372816_18	eggNOG-mapper	357276.EL88_11520	HNH endonuclease domain protein	NA
UHGV-1372816_18	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1372816_18	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1372816_18	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1372816_18	Structural annotation	PF07453, TIGR01453	NA	NA
UHGV-1372816_19	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-1372816_20	UniRef90	UniRef90_A0A7U3RL86	Recombination protein/HNH endonuclease	NA
UHGV-1372816_20	eggNOG-mapper	1176422.I6RTQ2_9CAUD	HNH endonuclease	NA
UHGV-1372816_20	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1372816_21	PHROG	phrog_35741	NA	unknown function
UHGV-1372816_21	eggNOG-mapper	1227266.HMPREF1551_00546	NA	NA
UHGV-1372816_22	PHROG	phrog_23774	NA	unknown function
UHGV-1372816_22	eggNOG-mapper	1105171.H2A0G1_9CAUD	NA	NA
UHGV-1372816_22	Structural annotation	PF05772, NF007281	NA	NA
UHGV-1372816_25	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-1372816_27	PHROG	phrog_503	NA	unknown function
UHGV-1372816_27	UniRef90	UniRef90_UPI001E31336F	endonuclease domain-containing protein	NA
UHGV-1372816_27	eggNOG-mapper	470145.BACCOP_01159	Protein conserved in bacteria	NA
UHGV-1372816_27	COG	COG2852	Very-short-patch-repair endonuclease	NA
UHGV-1372816_27	Structural annotation	PF04480, NF007294, COG2852	NA	NA
UHGV-1372816_28	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1372816_28	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1372816_28	UniRef90	UniRef90_A0A1F5FVI4	Replicative DNA helicase	NA
UHGV-1372816_28	eggNOG-mapper	411463.EUBVEN_01511	Participates in initiation and elongation during chromosome replication	NA
UHGV-1372816_28	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1372816_28	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1372816_28	COG	COG0305	Replicative DNA helicase	NA
UHGV-1372816_28	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1372816_29	PHROG	phrog_6969	NA	unknown function
UHGV-1372816_29	UniRef90	UniRef90_A0A2G9FIX8	Phg_2220_C domain-containing protein	NA
UHGV-1372816_29	eggNOG-mapper	1232446.BAIE02000002_gene816	NA	NA
UHGV-1372816_29	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-1372816_29	Structural annotation	PF05584, PF07261, MF_01819, TIGR01446, NF040939, COG3935	NA	NA
UHGV-1372816_32	PHROG	phrog_298	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1372816_32	UniRef90	UniRef90_A0A7U3RL83	Exonuclease	NA
UHGV-1372816_32	Structural annotation	PF06023, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-1372816_33	eggNOG-mapper	1123376.AUIU01000017_gene148	crossover junction endodeoxyribonuclease activity	NA
UHGV-1372816_33	Pfam	PF18897	Recombination directionality factor-like	Gp3-like
UHGV-1372816_33	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1372816_33	Structural annotation	PF18897	NA	NA
UHGV-1372816_35	PHROG	phrog_28096	NA	unknown function
UHGV-1372816_41	PHROG	phrog_26448	NA	unknown function
UHGV-1372816_41	eggNOG-mapper	1236514.BAKL01000034_gene2909	NA	NA
UHGV-1372816_41	Pfam	PF20647	NA	DUF6808
UHGV-1372816_41	Structural annotation	PF20647	NA	NA
UHGV-1372816_43	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-1372816_43	PHROG	phrog_894	endolysin	lysis
UHGV-1372816_43	UniRef90	UniRef90_A0A1V5IXL1	Peptidase M15	NA
UHGV-1372816_43	eggNOG-mapper	563192.HMPREF0179_02932	Peptidase M15	NA
UHGV-1372816_43	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-1372816_43	COG	COG3108	NA	NA
UHGV-1372816_43	Structural annotation	PF05951, COG3108	NA	NA
UHGV-1372816_45	PHROG	phrog_25468	NA	unknown function
UHGV-1372816_46	PHROG	phrog_35885	NA	unknown function
UHGV-1372816_46	UniRef90	UniRef90_A0A7U3RL91	Putative tail fiber	NA
UHGV-1372816_46	eggNOG-mapper	1105171.H2A0C5_9CAUD	NA	NA
UHGV-1372816_46	Structural annotation	COG5437	NA	NA
UHGV-1372816_47	PHROG	phrog_19383	NA	unknown function
UHGV-1372816_47	eggNOG-mapper	1105171.H2A0C6_9CAUD	NA	NA
UHGV-1372816_48	PHROG	phrog_20660	tail length tape measure protein	tail
UHGV-1372816_48	UniRef90	UniRef90_H2A0C7	Putative DNA segregation protein	NA
UHGV-1372816_48	eggNOG-mapper	1105171.H2A0C7_9CAUD	NA	NA
UHGV-1372816_49	PHROG	phrog_8914	virion structural protein	head and packaging
UHGV-1372816_49	UniRef90	UniRef90_A0A516L945	Putative structural protein	NA
UHGV-1372816_49	eggNOG-mapper	99179.B5TR86_9CAUD	NA	NA
UHGV-1372816_50	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1372816_50	UniRef90	UniRef90_A0A496DDB5	Endonuclease	NA
UHGV-1372816_50	eggNOG-mapper	1423814.HMPREF0549_1779	NUMOD4 motif	NA
UHGV-1372816_50	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1372816_50	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1372816_50	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1372816_50	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-1372816_51	PHROG	phrog_8193	major head protein	head and packaging
UHGV-1372816_51	UniRef90	UniRef90_A0A7U3MWC4	Putative tail protein	NA
UHGV-1372816_51	eggNOG-mapper	1105171.H2A0E7_9CAUD	NA	NA
UHGV-1372816_51	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1372816_52	PHROG	phrog_8145	NA	unknown function
UHGV-1372816_52	eggNOG-mapper	1105171.H2A0E0_9CAUD	NA	NA
UHGV-1372816_52	Structural annotation	PF08873	NA	NA
UHGV-1372816_54	PHROG	phrog_8189	NA	unknown function
UHGV-1372816_54	eggNOG-mapper	99179.B5TRC8_9CAUD	NA	NA
UHGV-1372816_54	Structural annotation	PF02839, NF041539	NA	NA
UHGV-1372816_55	PHROG	phrog_7231	virion structural protein	head and packaging
UHGV-1372816_55	UniRef90	UniRef90_A0A7U3MY95	Major capsid protein	NA
UHGV-1372816_55	eggNOG-mapper	99179.B5TRC7_9CAUD	NA	NA
UHGV-1372816_55	Structural annotation	PF05065, MF_04113, TIGR04387, COG4834	NA	NA
UHGV-1372816_56	PHROG	phrog_7970	virion structural protein	head and packaging
UHGV-1372816_56	eggNOG-mapper	99179.B5TRC6_9CAUD	NA	NA
UHGV-1372816_56	Structural annotation	PF21662	NA	NA
UHGV-1372816_58	PHROG	phrog_7376	portal protein	head and packaging
UHGV-1372816_58	UniRef90	UniRef90_A0A7U3MXY7	Portal protein	NA
UHGV-1372816_58	eggNOG-mapper	1121101.HMPREF1532_02599	NA	NA
UHGV-1372816_58	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1372816_59	PHROG	phrog_8193	major head protein	head and packaging
UHGV-1372816_59	UniRef90	UniRef90_H2A0E7	Putative capsid protein, major protein 2 (MP2)	NA
UHGV-1372816_59	eggNOG-mapper	1105171.H2A0E7_9CAUD	NA	NA
UHGV-1372816_59	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1372816_60	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-1372816_60	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-1372816_60	UniRef90	UniRef90_A0A646FYV4	Ribonuclease H	NA
UHGV-1372816_60	eggNOG-mapper	1176422.I6R1E6_9CAUD	RNase H	NA
UHGV-1372816_60	Pfam	PF00075	RNase H	RNase_H
UHGV-1372816_63	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1372816_63	UniRef90	UniRef90_UPI001E40D079	phage terminase large subunit	NA
UHGV-1372816_63	eggNOG-mapper	1105171.H2A0E8_9CAUD	intein-mediated protein splicing	NA
UHGV-1372816_63	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1372816_63	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-1372816_63	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-1372816_64	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1372816_64	UniRef90	UniRef90_UPI001BDA3C02	NUMOD4 domain-containing protein	NA
UHGV-1372816_64	eggNOG-mapper	357276.EL88_11520	HNH endonuclease domain protein	NA
UHGV-1372816_64	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1372816_64	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1372816_64	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1372816_64	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1372816	Yes	48,689 bps	48.86%	100.00%	0.9690
UHGV-0202679	No	48,606 bps	48.85%	100.00%	0.9728
UHGV-1336638	No	48,862 bps	48.84%	99.90%	0.9695
UHGV-1421626	No	35,932 bps	49.44%	73.80%	0.9740
UHGV-0139330	No	31,219 bps	48.40%	64.12%	0.9700
UHGV-1432146	No	31,219 bps	48.40%	64.12%	0.9700
UHGV-0246863	No	25,015 bps	49.89%	51.38%	0.9795
UHGV-0134224	No	17,255 bps	49.74%	35.44%	0.9761