vOTU-006570

Overview

vOTU representative UHGV-2190344

No. of genomes 4

Genome length 40,288 bps

Completeness 100.00% (complete)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006570
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vGENUS-00302 › vSUBGEN-10986 › vOTU-006570
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2190344
BioSample	NA
Genome length	40,288 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	78
CDS density	90.33%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2190344_1	PHROG	phrog_27197	NA	unknown function
UHGV-2190344_1	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-2190344_1	Structural annotation	NF007410	NA	NA
UHGV-2190344_2	Structural annotation	PF21715, MF_01804, TIGR00281, COG1386	NA	NA
UHGV-2190344_4	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-2190344_4	UniRef90	UniRef90_A0A8D9PDS3	Resistance protein	NA
UHGV-2190344_4	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-2190344_4	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-2190344_4	Structural annotation	PF05565	NA	NA
UHGV-2190344_5	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2190344_5	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-2190344_5	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-2190344_5	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-2190344_6	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2190344_6	UniRef90	UniRef90_UPI000C7BF263	recombination protein NinB	NA
UHGV-2190344_6	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-2190344_6	Structural annotation	PF05772	NA	NA
UHGV-2190344_7	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2190344_7	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2190344_7	UniRef90	UniRef90_R5XZW2	HNH domain-containing protein	NA
UHGV-2190344_7	eggNOG-mapper	1123058.KB894266_gene1536	HNH endonuclease	NA
UHGV-2190344_7	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2190344_7	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2190344_8	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2190344_8	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2190344_8	UniRef90	UniRef90_R5SNS5	Single-stranded DNA-binding protein	NA
UHGV-2190344_8	eggNOG-mapper	1519439.JPJG01000082_gene432	Single-strand binding protein family	NA
UHGV-2190344_8	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2190344_8	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2190344_8	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2190344_8	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2190344_8	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2190344_10	PHROG	phrog_16304	NA	unknown function
UHGV-2190344_10	UniRef90	UniRef90_UPI001959E913	NA	NA
UHGV-2190344_10	eggNOG-mapper	1226322.HMPREF1545_00016	HNH endonuclease	NA
UHGV-2190344_10	Pfam	PF19808	NA	DUF6291
UHGV-2190344_10	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2190344_10	Structural annotation	PF19808	NA	NA
UHGV-2190344_11	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-2190344_11	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2190344_11	UniRef90	UniRef90_A0A810Q3X8	IstB_IS21 domain-containing protein	NA
UHGV-2190344_11	eggNOG-mapper	1507.HMPREF0262_00302	Bacterial dnaA protein	NA
UHGV-2190344_11	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-2190344_11	COG	COG1484	DNA replication protein DnaC	NA
UHGV-2190344_11	Structural annotation	PF01695, MF_01919, NF005378, COG1484	NA	NA
UHGV-2190344_12	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2190344_12	UniRef90	UniRef90_UPI0006A41431	DNA cytosine methyltransferase	NA
UHGV-2190344_12	eggNOG-mapper	1235790.C805_00032	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2190344_12	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2190344_12	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-2190344_15	PHROG	phrog_38832	NA	unknown function
UHGV-2190344_15	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-2190344_16	PHROG	phrog_3136	NA	unknown function
UHGV-2190344_16	UniRef90	UniRef90_A0A6N7TMC2	ASCH domain-containing protein	NA
UHGV-2190344_16	eggNOG-mapper	693746.OBV_25380	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-2190344_16	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-2190344_16	Structural annotation	PF04266, MF_00684, NF008917, COG4933	NA	NA
UHGV-2190344_18	UniRef90	UniRef90_A0A8D9PDT5	Hydrogenase/urease nickel incorporation protein	NA
UHGV-2190344_21	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2190344_21	UniRef90	UniRef90_UPI0005288167	NA	NA
UHGV-2190344_21	eggNOG-mapper	1121105.ATXL01000006_gene1363	NA	NA
UHGV-2190344_21	Pfam	PF06356	NA	DUF1064
UHGV-2190344_21	Structural annotation	PF06356	NA	NA
UHGV-2190344_24	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2190344_25	Structural annotation	PF06003, MF_01354, TIGR00739, COG5475	NA	NA
UHGV-2190344_26	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2190344_26	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2190344_26	UniRef90	UniRef90_A0A8D9PDC4	Repressor protein	NA
UHGV-2190344_26	eggNOG-mapper	1226322.HMPREF1545_00039	sequence-specific DNA binding	NA
UHGV-2190344_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2190344_26	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2190344_26	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-2190344_27	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-2190344_27	UniRef90	UniRef90_UPI00195648BB	DNA-packaging protein	NA
UHGV-2190344_27	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-2190344_27	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-2190344_27	Structural annotation	PF16677	NA	NA
UHGV-2190344_28	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2190344_28	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-2190344_28	UniRef90	UniRef90_A0A4D7AZ70	PBSX family phage terminase large subunit	NA
UHGV-2190344_28	eggNOG-mapper	411461.DORFOR_01162	Phage terminase, large subunit, PBSX family	NA
UHGV-2190344_28	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-2190344_28	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-2190344_28	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2190344_28	COG	COG1783	Phage terminase large subunit	NA
UHGV-2190344_28	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-2190344_29	PHROG	phrog_64	portal protein	head and packaging
UHGV-2190344_29	UniRef90	UniRef90_UPI0018A8A301	phage portal protein	NA
UHGV-2190344_29	eggNOG-mapper	1235800.C819_02239	phage portal protein, SPP1	NA
UHGV-2190344_29	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2190344_29	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2190344_30	PHROG	phrog_15127	head protein	head and packaging
UHGV-2190344_30	UniRef90	UniRef90_A0A385EED1	INTEIN_C_TER domain-containing protein	NA
UHGV-2190344_30	eggNOG-mapper	1111135.HMPREF1248_0663	cell adhesion	NA
UHGV-2190344_30	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-2190344_30	NCBIFam	TIGR01445.1	intein N-terminal splicing region	NA
UHGV-2190344_30	COG	COG2369	NA	NA
UHGV-2190344_32	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2190344_32	UniRef90	UniRef90_A0A4D7AJK9	HK97 gp10 family phage protein	NA
UHGV-2190344_32	eggNOG-mapper	1280685.AUKC01000004_gene1630	NA	NA
UHGV-2190344_32	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2190344_33	Structural annotation	PF18152	NA	NA
UHGV-2190344_34	Structural annotation	PF06810	NA	NA
UHGV-2190344_35	PHROG	phrog_544	major head protein	head and packaging
UHGV-2190344_35	UniRef90	UniRef90_A0A810PZM2	S-l_SbsC_C domain-containing protein	NA
UHGV-2190344_35	eggNOG-mapper	1347392.CCEZ01000005_gene1236	NA	NA
UHGV-2190344_35	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-2190344_35	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2190344_37	PHROG	phrog_17977	NA	unknown function
UHGV-2190344_37	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-2190344_37	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-2190344_38	PHROG	phrog_17405	head protein	head and packaging
UHGV-2190344_38	Structural annotation	PF11367	NA	NA
UHGV-2190344_39	PHROG	phrog_885	major tail protein	tail
UHGV-2190344_39	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-2190344_39	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-2190344_39	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2190344_40	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-2190344_42	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-2190344_42	UniRef90	UniRef90_A0A3D0EFB4	Phage tail protein (Fragment)	NA
UHGV-2190344_42	eggNOG-mapper	536233.CLO_1577	tape measure	NA
UHGV-2190344_42	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-2190344_42	Structural annotation	PF20155, COG3941	NA	NA
UHGV-2190344_43	PHROG	phrog_1194	NA	unknown function
UHGV-2190344_43	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-2190344_44	PHROG	phrog_32744	NA	unknown function
UHGV-2190344_44	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-2190344_44	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-2190344_46	Structural annotation	PF10651, NF038186	NA	NA
UHGV-2190344_47	PHROG	phrog_31538	NA	unknown function
UHGV-2190344_48	PHROG	phrog_13589	NA	unknown function
UHGV-2190344_48	eggNOG-mapper	742733.HMPREF9469_05009	NA	NA
UHGV-2190344_52	PHROG	phrog_937	hemolysin	other
UHGV-2190344_52	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-2190344_53	UniRef90	UniRef90_A0A1T5AMW7	NAGPA domain-containing protein	NA
UHGV-2190344_53	Structural annotation	PF09992, COG4632	NA	NA
UHGV-2190344_54	PHROG	phrog_13256	NA	unknown function
UHGV-2190344_54	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-2190344_55	PHROG	phrog_21357	endolysin	lysis
UHGV-2190344_55	UniRef90	UniRef90_G9YP37	SLH domain-containing protein	NA
UHGV-2190344_55	eggNOG-mapper	243164.DET1070	SMART Glycoside hydrolase, family 25 subgroup	NA
UHGV-2190344_55	Pfam	PF05257	CHAP domain	CHAP
UHGV-2190344_55	COG	COG1388	LysM repeat	NA
UHGV-2190344_55	Structural annotation	PF10030, TIGR02594, COG3942	NA	NA
UHGV-2190344_57	PHROG	phrog_3754	NA	unknown function
UHGV-2190344_57	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-2190344_58	PHROG	phrog_21718	NA	unknown function
UHGV-2190344_58	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2190344_59	PHROG	phrog_22984	NA	unknown function
UHGV-2190344_60	PHROG	phrog_16490	NA	unknown function
UHGV-2190344_60	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2190344_62	PHROG	phrog_20016	NA	unknown function
UHGV-2190344_62	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-2190344_62	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-2190344_62	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2190344_63	PHROG	phrog_28802	NA	unknown function
UHGV-2190344_64	eggNOG-mapper	1232443.BAIA02000078_gene6	NA	NA
UHGV-2190344_65	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2190344_65	PHROG	phrog_95	integrase	integration and excision
UHGV-2190344_65	UniRef90	UniRef90_A0A3A9I9T1	Recombinase family protein	NA
UHGV-2190344_65	eggNOG-mapper	357809.Cphy_2997	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-2190344_65	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2190344_65	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2190344_65	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2190344_65	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-2190344_66	UniRef90	UniRef90_A0A8D9UHA6	Helix-turn-helix XRE-family like protein	NA
UHGV-2190344_66	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2190344_66	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2190344_66	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-2190344_71	Structural annotation	PF03885	NA	NA
UHGV-2190344_72	eggNOG-mapper	411459.RUMOBE_00961	Bacteriophage CI repressor helix-turn-helix domain	NA
UHGV-2190344_72	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-2190344_72	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-2190344_75	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2190344_75	UniRef90	UniRef90_N9Z4Q7	HTH cro/C1-type domain-containing protein	NA
UHGV-2190344_75	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2190344_75	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2190344_77	PHROG	phrog_22529	NA	unknown function
UHGV-2190344_77	UniRef90	UniRef90_A0A352RPR8	3D domain-containing protein	NA
UHGV-2190344_77	eggNOG-mapper	411461.DORFOR_01578	3D domain	NA
UHGV-2190344_77	Pfam	PF06725	3D domain	3D
UHGV-2190344_77	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2190344_77	Structural annotation	PF06725, MF_02071, NF040670, COG3584	NA	NA
UHGV-2190344_78	PHROG	phrog_4433	NA	unknown function
UHGV-2190344_78	eggNOG-mapper	886882.PPSC2_p0363	regulation of DNA-templated transcription, elongation	NA
UHGV-2190344_78	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2190344	Yes	40,288 bps	54.27%	100.00%	0.9816
UHGV-0187744	No	40,207 bps	54.25%	100.00%	0.9817
UHGV-1387572	No	40,429 bps	54.31%	99.90%	0.9814
UHGV-0071037	No	29,505 bps	54.57%	72.94%	0.9818