vOTU-006686

Overview

vOTU representative UHGV-2065924

No. of genomes 7

Genome length 43,524 bps

Completeness 100.00% (complete)

Host Flavonifractor plautii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006686
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00588 › vGENUS-06332 › vSUBGEN-27701 › vOTU-006686
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Flavonifractor › Flavonifractor plautii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2065924
BioSample	SAMN05971590
Genome length	43,524 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	78
CDS density	89.02%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2065924_1	PHROG	phrog_3754	NA	unknown function
UHGV-2065924_1	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-2065924_2	PHROG	phrog_21718	NA	unknown function
UHGV-2065924_2	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2065924_3	PHROG	phrog_22984	NA	unknown function
UHGV-2065924_4	PHROG	phrog_16490	NA	unknown function
UHGV-2065924_4	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-2065924_5	PHROG	phrog_20016	NA	unknown function
UHGV-2065924_5	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-2065924_5	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-2065924_5	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2065924_6	Structural annotation	PF12510	NA	NA
UHGV-2065924_7	UniRef90	UniRef90_A0A7M1RSZ3	RNA polymerase sigma factor/ubiquitin-like protein	NA
UHGV-2065924_7	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-2065924_8	KOfam	K14059	int; integrase	NA
UHGV-2065924_8	PHROG	phrog_1	integrase	integration and excision
UHGV-2065924_8	UniRef90	UniRef90_UPI001C03825E	site-specific integrase	NA
UHGV-2065924_8	eggNOG-mapper	1514668.JOOA01000001_gene242	Phage integrase family	NA
UHGV-2065924_8	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2065924_8	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2065924_8	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-2065924_9	PHROG	phrog_37750	NA	unknown function
UHGV-2065924_9	Structural annotation	PF16146, MF_00867, COG5007	NA	NA
UHGV-2065924_11	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2065924_11	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2065924_11	UniRef90	UniRef90_G9YR83	DNA-binding helix-turn-helix protein	NA
UHGV-2065924_11	eggNOG-mapper	411471.SUBVAR_05818	sequence-specific DNA binding	NA
UHGV-2065924_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2065924_11	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2065924_11	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-2065924_13	Structural annotation	PF02185	NA	NA
UHGV-2065924_19	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2065924_19	Structural annotation	PF13560, MF_00535, NF041951, COG3655	NA	NA
UHGV-2065924_20	PHROG	phrog_25245	NA	unknown function
UHGV-2065924_20	UniRef90	UniRef90_A0A810Q5U9	3D domain-containing protein	NA
UHGV-2065924_20	eggNOG-mapper	1226322.HMPREF1545_00012	3D domain	NA
UHGV-2065924_20	Pfam	PF06725	3D domain	3D
UHGV-2065924_20	COG	COG3584	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	NA
UHGV-2065924_22	UniRef90	UniRef90_A0A6N9QJT6	NA	NA
UHGV-2065924_22	eggNOG-mapper	33035.JPJF01000135_gene5082	NA	NA
UHGV-2065924_22	Pfam	PF06378	NA	DUF1071
UHGV-2065924_22	Structural annotation	PF06378, TIGR00607, COG5055	NA	NA
UHGV-2065924_23	Structural annotation	PF09588, TIGR04328, COG5377	NA	NA
UHGV-2065924_24	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2065924_24	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-2065924_24	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-2065924_24	Structural annotation	PF05772	NA	NA
UHGV-2065924_25	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2065924_25	UniRef90	UniRef90_UPI001C122365	HNH endonuclease	NA
UHGV-2065924_25	eggNOG-mapper	1397527.Q670_13830	endonuclease	NA
UHGV-2065924_25	Pfam	PF14279	HNH endonuclease	HNH_5
UHGV-2065924_25	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2065924_26	PHROG	phrog_4973	NA	unknown function
UHGV-2065924_26	UniRef90	UniRef90_A0A3D3Y0P8	DNA-binding protein	NA
UHGV-2065924_26	eggNOG-mapper	1072685.IX83_07155	Helix-turn-helix domain	NA
UHGV-2065924_26	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-2065924_26	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-2065924_27	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2065924_27	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2065924_27	UniRef90	UniRef90_A0A810QFR8	Single-stranded DNA-binding protein	NA
UHGV-2065924_27	eggNOG-mapper	1007096.BAGW01000023_gene151	Single-strand binding protein family	NA
UHGV-2065924_27	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2065924_27	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2065924_27	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2065924_27	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2065924_27	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2065924_28	PHROG	phrog_16304	NA	unknown function
UHGV-2065924_28	UniRef90	UniRef90_A0A810QMI2	NA	NA
UHGV-2065924_28	Pfam	PF19808	NA	DUF6291
UHGV-2065924_28	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2065924_28	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-2065924_29	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-2065924_29	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2065924_29	UniRef90	UniRef90_A0A7X8IB41	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-2065924_29	eggNOG-mapper	469604.HMPREF0946_00819	NA	NA
UHGV-2065924_29	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-2065924_30	UniRef90	UniRef90_A0A4D7ATA9	Helix-turn-helix domain-containing protein	NA
UHGV-2065924_30	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-2065924_30	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-2065924_30	Structural annotation	PF04936, NF033558	NA	NA
UHGV-2065924_31	UniRef90	UniRef90_UPI0018AC14ED	Lar family restriction alleviation protein	NA
UHGV-2065924_31	eggNOG-mapper	742738.HMPREF9460_04054	Restriction alleviation protein Lar	NA
UHGV-2065924_31	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-2065924_32	PHROG	phrog_10714	NA	unknown function
UHGV-2065924_32	eggNOG-mapper	1226322.HMPREF1545_00023	NA	NA
UHGV-2065924_33	PHROG	phrog_25732	NA	unknown function
UHGV-2065924_33	Structural annotation	NF011227	NA	NA
UHGV-2065924_34	PHROG	phrog_874	NA	unknown function
UHGV-2065924_34	UniRef90	UniRef90_A0A4P6LRJ9	ASCH domain-containing protein	NA
UHGV-2065924_34	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-2065924_34	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-2065924_38	PHROG	phrog_22543	NA	unknown function
UHGV-2065924_40	PHROG	phrog_16951	NA	unknown function
UHGV-2065924_40	eggNOG-mapper	693746.OBV_18840	NA	NA
UHGV-2065924_40	Structural annotation	PF04586, TIGR01543	NA	NA
UHGV-2065924_41	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-2065924_41	UniRef90	UniRef90_A0A810QB82	NA	NA
UHGV-2065924_41	eggNOG-mapper	551790.B5BTW0_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-2065924_41	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-2065924_41	Structural annotation	PF18909	NA	NA
UHGV-2065924_42	PHROG	phrog_8684	NA	unknown function
UHGV-2065924_42	UniRef90	UniRef90_A0A1C5WBP0	YopX protein	NA
UHGV-2065924_42	eggNOG-mapper	1226322.HMPREF1545_00036	YopX protein	NA
UHGV-2065924_42	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-2065924_43	PHROG	phrog_924	NA	unknown function
UHGV-2065924_43	UniRef90	UniRef90_A0A810Q569	NA	NA
UHGV-2065924_43	Pfam	PF04448	NA	DUF551
UHGV-2065924_43	Structural annotation	PF04448, NF041588	NA	NA
UHGV-2065924_46	PHROG	phrog_2717	NA	unknown function
UHGV-2065924_46	eggNOG-mapper	552398.HMPREF0866_02231	NA	NA
UHGV-2065924_48	PHROG	phrog_2412	NA	unknown function
UHGV-2065924_48	eggNOG-mapper	742738.HMPREF9460_02504	NA	NA
UHGV-2065924_49	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2065924_49	PHROG	phrog_29775	NA	unknown function
UHGV-2065924_49	UniRef90	UniRef90_A0A1C6B5W6	Phage terminase, large subunit, PBSX family	NA
UHGV-2065924_49	eggNOG-mapper	428125.CLOLEP_01804	Phage terminase, large subunit, PBSX family	NA
UHGV-2065924_49	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2065924_49	COG	COG1783	Phage terminase large subunit	NA
UHGV-2065924_49	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2065924_50	PHROG	phrog_533	portal protein	head and packaging
UHGV-2065924_50	UniRef90	UniRef90_A0A136WBU7	Phage portal protein, SPP1 Gp6-like	NA
UHGV-2065924_50	eggNOG-mapper	397291.C804_01614	phage minor capsid protein	NA
UHGV-2065924_50	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-2065924_51	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2065924_51	UniRef90	UniRef90_A0A1C6B625	Phage minor capsid protein 2	NA
UHGV-2065924_51	eggNOG-mapper	1449050.JNLE01000003_gene3892	Phage minor capsid protein 2	NA
UHGV-2065924_51	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2065924_51	COG	COG2369	NA	NA
UHGV-2065924_51	Structural annotation	PF06152	NA	NA
UHGV-2065924_52	PHROG	phrog_1233	NA	unknown function
UHGV-2065924_52	eggNOG-mapper	1232443.BAIA02000078_gene33	NA	NA
UHGV-2065924_54	UniRef90	UniRef90_A0A1C6B5I1	Phage minor structural protein GP20	NA
UHGV-2065924_54	eggNOG-mapper	883114.HMPREF9709_01195	Phage minor structural protein GP20	NA
UHGV-2065924_54	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-2065924_54	Structural annotation	PF06810	NA	NA
UHGV-2065924_55	PHROG	phrog_544	major head protein	head and packaging
UHGV-2065924_55	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-2065924_55	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-2065924_55	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-2065924_55	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2065924_56	PHROG	phrog_541	head-tail adaptor	connector
UHGV-2065924_56	UniRef90	UniRef90_A0A345MKD1	Putative head-tail connector protein	NA
UHGV-2065924_57	PHROG	phrog_3366	NA	unknown function
UHGV-2065924_57	Pfam	PF20536	NA	DUF6751
UHGV-2065924_57	Structural annotation	PF20536, COG5614	NA	NA
UHGV-2065924_58	PHROG	phrog_556	minor head protein	head and packaging
UHGV-2065924_58	UniRef90	UniRef90_UPI001C3B04D8	Minor capsid protein	NA
UHGV-2065924_58	eggNOG-mapper	411461.DORFOR_01170	Minor capsid protein	NA
UHGV-2065924_58	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-2065924_58	Structural annotation	PF11114	NA	NA
UHGV-2065924_59	PHROG	phrog_3266	tail completion	connector
UHGV-2065924_59	Structural annotation	PF12691	NA	NA
UHGV-2065924_60	PHROG	phrog_820	major tail protein	tail
UHGV-2065924_60	UniRef90	UniRef90_A0A174M1L1	S-l_SbsC_C domain-containing protein	NA
UHGV-2065924_60	eggNOG-mapper	411461.DORFOR_01172	NA	NA
UHGV-2065924_60	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-2065924_61	Structural annotation	PF20378	NA	NA
UHGV-2065924_62	PHROG	phrog_706	NA	unknown function
UHGV-2065924_62	UniRef90	UniRef90_A0A1C6B556	Bacteriophage Gp15 protein	NA
UHGV-2065924_62	eggNOG-mapper	1151292.QEW_4528	Bacteriophage Gp15 protein	NA
UHGV-2065924_62	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2065924_62	Structural annotation	PF06854	NA	NA
UHGV-2065924_63	PHROG	phrog_23464	NA	unknown function
UHGV-2065924_63	UniRef90	UniRef90_A0A1C6B4Q1	Phage-related protein	NA
UHGV-2065924_63	eggNOG-mapper	665950.HMPREF1025_02660	phage tail tape measure protein	NA
UHGV-2065924_63	COG	COG5283	Phage-related tail protein	NA
UHGV-2065924_63	Structural annotation	PF20155	NA	NA
UHGV-2065924_64	eggNOG-mapper	1120998.AUFC01000030_gene2246	NA	NA
UHGV-2065924_64	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-2065924_65	PHROG	phrog_32744	NA	unknown function
UHGV-2065924_65	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-2065924_65	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-2065924_67	eggNOG-mapper	1203606.HMPREF1526_02029	Collagen triple helix repeat (20 copies)	NA
UHGV-2065924_67	COG	COG1409	3',5'-cyclic AMP phosphodiesterase CpdA	NA
UHGV-2065924_68	eggNOG-mapper	742733.HMPREF9469_01803	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-2065924_68	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-2065924_69	Structural annotation	NF012201	NA	NA
UHGV-2065924_72	eggNOG-mapper	445972.ANACOL_03381	NA	NA
UHGV-2065924_74	PHROG	phrog_13256	NA	unknown function
UHGV-2065924_74	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-2065924_75	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2065924_75	PHROG	phrog_18955	NA	unknown function
UHGV-2065924_75	UniRef90	UniRef90_A0A810Q4Z7	SLH domain-containing protein	NA
UHGV-2065924_75	eggNOG-mapper	1226322.HMPREF1545_00782	NA	NA
UHGV-2065924_75	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-2065924_75	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-2065924_75	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2065924_75	Structural annotation	PF01520, PF09992, MF_00417, TIGR02883, COG0860, COG4632	NA	NA
UHGV-2065924_76	UniRef90	UniRef90_A0A1C6JAI6	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-2065924_76	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-2065924_77	UniRef90	UniRef90_A0A173UQ62	PemK-like protein	NA
UHGV-2065924_77	eggNOG-mapper	888055.HMPREF9015_01057	NA	NA
UHGV-2065924_77	Structural annotation	PF02452, NF010262, COG2337	NA	NA
UHGV-2065924_78	PHROG	phrog_1281	NA	unknown function
UHGV-2065924_78	UniRef90	UniRef90_A0A4R2MM46	Putative phage-associated protein	NA
UHGV-2065924_78	eggNOG-mapper	1122173.AXVL01000004_gene821	Phage-associated protein	NA
UHGV-2065924_78	Pfam	PF13274	Antitoxin SocA-like, Panacea domain	SocA_Panacea
UHGV-2065924_78	COG	COG3600	NA	NA
UHGV-2065924_78	Structural annotation	PF13274, COG3600	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2065924	Yes	43,524 bps	49.24%	100.00%	0.9806
UHGV-0292927	No	43,476 bps	49.24%	100.00%	0.9801
UHGV-1495067	No	43,875 bps	49.12%	92.66%	0.9812
UHGV-0153609	No	36,949 bps	48.94%	81.21%	0.9806
UHGV-1385316	No	22,244 bps	48.89%	51.95%	0.9810
UHGV-1329570	No	19,698 bps	49.01%	46.02%	0.9803
UHGV-0160735	No	10,565 bps	52.22%	22.53%	0.9813